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Show an image of an alignment with 1 pixel per residue

Purpose: This tool generates a PNG image of an alignment using 1 or more colored pixel(s) for each residue. This way, errors in large alignments can be quickly spotted. We provided an example of how to use the tool.

Input
Paste your alignment here
[Sample Input]
or upload your file
Options
Choose sequence type Guess (by composition)
Amino-acid
DNA
Scale (each alignment residue will be a square of this many pixels per side)

Plotting code created by Will Fischer; Interface by Carla Kuiken.

last modified: Thu Dec 11 11:42 2008


Questions or comments? Contact us at seq-info@lanl.gov.

 
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