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HIV sequence database



Alignment Slicer

Purpose: This tool cuts slices from an input alignment. See Help Page for details.

The sample input extracts the A, G, and ambiguous regions of CRF02_AG from an alignment of HIV-1.

Input
Upload your alignment
Or enter your alignment here
Upload text file of breakpoints
Or enter breakpoints here
Options
Breakpoints refer to: Residues of 1st sequence Alignment columns
Alignment starts at residue number
Gap characters
last modified: Thu Nov 21 09:55 2013


Questions or comments? Contact us at seq-info@lanl.gov.

 
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