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HIV sequence database



PepMap Explanation

Input

Peptides should be pasted or uploaded in the following format.

	peptide_name (space or tab) peptide
   e.g.   pep1  IRLRPGGKKK 
	  pep2	VSQNYPIVQN
Note:
The tool may have difficulty finding the correct location of sequences <8 amino acids.

Input Option: Generate Maps of the Alignment

When this option is checked, peptide maps in HTML and PDF formats will be generated. If this option is unchecked, the tool will work faster, but only the Fasta alignment will be generated.

Output

Mapping results are displayed in several formats.

last modified: Thu Sep 20 10:45 2012


Questions or comments? Contact us at seq-info@lanl.gov.

 
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