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HIV sequence database

Protein Feature Accent

Purpose: To view 3D structures of HIV proteins and to map a desired sequence (e.g., short functional domain or epitope) directly onto the interactive graphic.

Usage: Choose a structure or upload a structure file in PDB format. Uploading a sequence is not required; any sequences provided will be aligned with the structure sequence and displayed. For details, see Protein Feature Accent Explanation.

Select a protein structure:
[switch to full structure list]

upload a PDB file:
You may provide an amino acid sequence alignment (or a single unaligned sequence) below:
Paste your sequence(s) here
[Sample Input]
or upload a sequence file:
last modified: Mon Nov 9 13:57 2015

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