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HIV sequence database



HIV Sequence Database

Programs and Tools

Search Interface retrieves HIV and SIV sequences, which can then be aligned and used to build trees

Geography Search Interface retrieves HIV sequences based on geographical distribution

Genome Browser uses jBrowse to display diverse data about the HIV-1 genome and proteome

Tools for working with sequences lists all our online tools, organized by function

Alignments

HIV Premade Alignments includes Consensus and Ancestral Sequences, Subtype Reference Alignments, and Complete Alignments

Information

HIV Sequence Compendium print or order our annual publication

Tutorials and other information unpublished web-based content

Links to other HIV/AIDS tools and information

About this website

FAQ general information about this website

Site Statistics usage information for www.hiv.lanl.gov

How to Cite this Database

Editorial Board


Archived News News


CATNAP: Hybrid Input
The original CATNAP tool can compile, analyze and tally neutralizing antibody panels from a database of publicly available HIV neutralization data. A new version, CATNAP: Hybrid Input, is now available. This version allows users to combine their own neutralization panel data together with published data. HIV Env sequences are available as a premade alignment, or can be provided by the user. 28 July 2015

2014 Alignments
The Web and Filtered Alignments are available online. 16 June 2015


last modified: Mon Aug 24 13:46 2015


Questions or comments? Contact us at seq-info@lanl.gov.

 
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