HIV Databases HIV Databases home HIV Databases home
HIV sequence database



Special Interest Data:
Transmitted Virus Envelopes Prior to Seroconversion

Description

Set of 567 subtype B env sequences from 37 subjects prior to seroconversion. MACS cohort.

Data

Alignment: 567 env V1-V5 sequences from 37 patients (Fasta format)
Data: annotation data (comma-delimited text)

  • Alignment provided by authors.
  • Sequences correspond to accession numbers EU184091-EU184657.
  • Data file contains CD4 counts, viral loads and sampling dates.
Primary reference

Gottlieb GS, Heath L, Nickle DC, Wong KG, Leach SE, Jacobs B, Gezahegne S, van't Wout AB, Jacobson LP, Margolick JB, Mullins JI.
HIV-1 variation before seroconversion in men who have sex with men: analysis of acute/early HIV infection in the multicenter AIDS cohort study.
J Infect Dis. 2008 Apr 1;197(7):1011-5.
PMID 18419538

Return to Special Interest Alignments main page.

 

last modified: Wed Dec 11 13:17 2013


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Los Alamos National Security, LLC, for the U.S. Department of Energy's National Nuclear Security Administration
Copyright © 2005-2012 LANS LLC All rights reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health