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HIV-1 Coreceptor Use Data from the NIH AIDS Research and Reference Reagent Program

The following table is a compilation of HIV-1 isolates from the AIDS Reagent Program. They are ordered by clade (based on env) with their phenotype, coreceptor classification, and main receptor characteristics shown, as in the previous table. These data were derived from the laboratories of Drs. David Ho and Jack Nunberg.

Strain

Accessiona

Clade

Tropismb

Designationc

Receptord

92RW008

U08762 U08630

A

NSI

R5

CCR5

92RW016

U08633

A

R5

CCR5

92RW021

U08641

A

R5

CCR5

92RW023

U13455

A

NSI

R5

CCR5

92RW024

U08648

A

R5

CCR5

92RW025

U08657

A

R5

CCR5

93RW002

NA

A

R5

CCR5

93RW004

NA

A

R5

CCR5

93RW005

NA

A

R5

CCR5

93RW018

NA

A

R5

CCR5

93RW020

NA

A

R5X4

CXCR4, CCR5

93RW021

NA

A

R5

CCR5

93RW022

NA

A

R5

CCR5

93RW024

NA

A

R5X4

CXCR4, CCR5

93RW028

NA

A

R5

CCR5

93RW029

NA

A

NSI

R5

CCR5

93RW031

NA

A

R5

CCR5

93RW034

NA

A

R5

CCR5

93RW035

NA

A

R5

CCR5

93RW037

NA

A

R5

CCR5

93UG077

NA

A

R5

CCR5

93UG079

NA

A

R5

CCR5

93UG089

NA

A

R5

CCR5

94UG103

NA

A

R5X4

CXCR4, CCR5

97USSN54

AF096347

A

R5

CCR5

92USSN20

AF096341

A

R5X4

CXCR4, CCR5

96USNG17

NA

A

X4

CXCR4

91US006

U27443

B

R5

CCR5

91US056

U79719

B

NSI

R5

CCR5

91US715

NA

B

R5

CCR5

92BR003

U08771

B

NSI

R5

CCR5

92BR004

U0867

B

NSI

R5

CCR5

92BR014

U08796

B

SI

R5X4

CXCR4, CCR5

92BR017

U08774

B

NSI

R5

CCR5

92BR018

NA

B

NSI

R5

CCR5

92BR019

NA

B

R5

CCR5

92BR021

NA

B

NSI

R5

CCR5

92BR023

U08779

BC

NSI

R5

CCR5

92BR024

NA

B

R5

CCR5

92BR026

NA

B

R5

CCR5

92BR028

U16217

B

NSI

R5

CCR5

92BR030

NA

B

NSI

R5

CCR5

92HT594

U08445

B

SI

R5X4

CXCR4, CCR5

92HT596

U08446

B

SI

R5X4

CXCR4, CCR5

92PR729

U04927

B

R5

CCR5

92TH026

U08802

B

NSI

R5

CCR5

92US076

NA

B

SI

R5X4

CXCR4, CCR5

92US660

U04909

B

NSI

R5

CCR5

92US714

U08450

B

NSI

R5

CCR5

92US723

NA

B

R5X4

CXCR4, CCR5

92US727

U79720

B

NSI

R5

CCR5

93BR008

NA

B

R5

CCR5

93BR009

NA

B

R5

CCR5

93BR011

NA

B

R5

CCR5

93BR012

NA

B

R5

CCR5

93BR013

NA

B

R5

CCR5

93BR015

NA

B

R5

CCR5

93BR017

NA

B

R5

CCR5

93BR021

NA

B

R5

CCR5

93BR022

NA

B

R5

CCR5

93BR023

NA

B

R5

CCR5

93BR024

NA

B

R5

CCR5

93BR025

NA

B

R5

CCR5

93BR026

NA

B

R5

CCR5

93BR027

NA

B

R5

CCR5

93BR028

NA

B

R5

CCR5

93US073

U79721

B

NSI

R5

CCR5

A17

NA

B

R5X4

CXCR4, CCR5

BZ167

L22087 L11752

B

R5X4

CXCR4, CCR5

ME1

U66221

B

R5

CCR5

ME46

U66222

B

R5X4

CXCR4, CCR5

MN

M17449

B

X4

CXCR4

QZ4589

U32396

B

R5

CCR5

93TH067

U39258 U39259

B

R5

CCR5

93TH074

NA

B

R5

CCR5

93TH080

NA

B

R5

CCR5

96USHIPS4

NA

B

R5X4

CXCR4, CCR5

96USHIPS9

NA

B

R5X4

CXCR4, CCR5

96USHIPS7

NA

B

R5

CCR5

93BR019

U27444 U51289 U27404

BF

X4

CXCR4

93IN101

NA

C

NSI

R5

CCR5

93IN904

AF067157

C

R5

CCR5

93IN905

AF067158

C

R5

CCR5

93IN999

AF067154

C

R5

CCR5

93MW959

U08453 U51292

C

NSI

R5

CCR5

93MW960

U08454 U51293

C

NSI

R5

CCR5

94KE105

NA

C

R5

CCR5

96USNG31

AF096327

C

R5X4

CXCR4, CCR5

96USNG58

AF096329

C

R5

CCR5

97USNG30

AF096349

C

R5

CCR5

98BR004

NA

C

R5

CCR5

98CN006

NA

C

R5

CCR5

98IN022

NA

C

R5

CCR5

98IN026

NA

C

R5

CCR5

98TZ013

NA

C

R5

CCR5

98TZ017

NA

C

R5

CCR5

97ZA003

NA

C

R5

CCR5

97ZA009

NA

C

R5

CCR5

97ZA012

NA

C

R5

CCR5

92UG001

U08721

D

SI

R5X4

CXCR4, CCR5

92UG005

U08803

D

R5

CCR5

92UG035

U36881

AD

NSI

R5

CCR5

92UG038

U08806

D

SI

X4

CXCR4

93UG053

U08738

D

SI

X4

CXCR4

93UG059

U08739

D

SI

X4

CXCR4

93UG065

U08740

D

SI

X4

CXCR4

93UG067

U13545

D

SI

R5X4

CXCR4, CCR5

93UG070

U08741

D

SI

X4

CXCR4

93UG082

NA

D

NSI

R5

CCR5

93UG086

NA

D

SI

R5X4

CXCR4, CCR5

94UG105

NA

D

SI

X4

CXCR4

94UG108

NA

D

NSI

R5

CCR5

94UG114

U88824

D

NSI

R5

CCR5

94UG117

AF096328

D

SI

X4

CXCR4

94UG118

NA

D

NSI

R5

CCR5

92TH003

U08743

E\sup{i}

NSI

R5

CCR5

92TH005

U08744

E

NSI

R5

CCR5

92TH006

U08810

EA

NSI

R5

CCR5

92TH007

U08747

E

NSI

R5

CCR5

92TH009

U08748

E

NSI

R5

CCR5

92TH019

U08753

E

NSI

R5

CCR5

92TH020

U08754

E

NSI

R5

CCR5

92TH021

U08724

E

NSI

R5

CCR5

92TH024

U08761

E

R5

CCR5

93TH051

NA

E

R5X4

CXCR4, CCR5

93TH053

NA

E

X4

CXCR4

93TH054

NA

E

R5

CCR5

93TH057

NA

E

R5

CCR5

93TH060

NA

E

R5

CCR5

93TH062

NA

E

R5

CCR5

93TH064

NA

E

R5

CCR5

93TH065

NA

E

R5

CCR5

93TH069A

NA

E

R5

CCR5

93TH072

NA

E

R5

CCR5

93TH073

NA

E

R5

CCR5

93TH078

NA

E

R5

CCR5

CMU02

U48267

E

SI

X4

CXCR4

CMU08

U48268

E

SI

X4

CXCR4

CMU10

E

NSI

X4

CXCR4

93BR020

AF005494

F

SI

R5X4

CXCR4, CCR5

G3

U88825

AG

NSI

R5

CCR5

Jv1083

U88826

G

NSI

R5

CCR5

RU132

NA

G

NA

R5

CCR5

RU570

U08368

G

NSI

R5

CCR5

YBF30

AJ006022

N

NSI

R5

CCR5

BCF01

Y14496

O

NSI

R5

CCR5

BCF02

Y14497

O

NSI

R5

CCR5

BCF03

Y14498

O

NSI

R5

CCR5

MVP5180

L20571

O

SI

R5X4

CXCR4, CCR5

74V

X4

CXCR4

90US144

NA

NSI

R5

CCR5

92US072

NA

NSI

R5

CCR5

92US077

NA

SI

R5X4

CXCR4, CCR5

93US074

NA

NSI

R5

CCR5

93US075

NA

NSI

R5

CCR5

93US140

NA

NSI

R5

CCR5

93US141

NA

NSI

R5

CCR5

93US142

NA

NSI

R5

CCR5

93US143

NA

SI

R5X4

CXCR4, CCR5

93US149

NA

NSI

R5

CCR5

93US151

NA

SI

R5X4

CXCR4, CCR5

93US155

NA

NSI

R5

CCR5

93US157

NA

NSI

R5

CCR5

93US159

NA

NSI

R5

CCR5

A012

M91819

B

NA

R5X4

CXCR4, CCR5

A018

NA

NA

NA

R5X4

CXCR4, CCR5

ASJM 108

NA

R5

CCR5

ASM 121

NA

R5

CCR5

ASM 3

NA

R5

CCR5

ASM 34

NA

R5

CCR5

ASM 42

NA

R5

CCR5

ASM 44

NA

R5X4

CXCR4, CCR5

ASM 54

NA

R5X4

CXCR4, CCR5

ASM 57

NA

R5

CCR5

ASM 61

NA

R5

CCR5

ASM 71

NA

R5

CCR5

ASM 79

NA

R5

CCR5

ASM 80

NA

R5

CCR5

ASM 93534

NA

R5

CCR5

ASM 93765

NA

R5

CCR5

ASM 94122

NA

R5

CCR5

CC

X4

CXCR4

G910-11

NA

R5X4

CXCR4, CCR5

I391-1

NA

R5X4

CXCR4, CCR5

I391-4

NA

R5X4

CXCR4, CCR5

I495-2

NA

R5X4

CXCR4, CCR5

JC

NA

X4

CXCR4

L10R/M46I/L63P/I84V

NA

X4

CXCR4

LAI-M184V

X4

CXCR4

M46L/L63P/V82T/I84V

NA

R5X4

CXCR4, CCR5

N119

X4

CXCR4

RTMC

NA

R5X4

CXCR4, CCR5

RTMDR1

NA

X4

CXCR4

RTMF

NA

R5X4

CXCR4, CCR5

last modified: Fri Aug 10 14:02 2007


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