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Recombinant HIV-1 Drawing Tool

Purpose: This tool maps your recombinant breakpoint data for HIV-1 onto a map of the HXB2 genome. The different subtypes that compose your genome appear as differently-colored regions in the map. Before using, please see Recombinant HIV-1 Drawing Tool Explanation.

Input
Upload text file of breakpoints
This is an Excel spreadsheet
Or enter breakpoint data here
If the breakpoint data entered above are not expressed in HXB2 coordinates, check this box and paste sequence here Non-HXB2 coordinates
Or upload your sequence file
Click to manually set subtype colors

Other Links:
For general information on CRFs see What is a CRF? in our FAQ section.
For an overview of existing circulating recombinant forms go here.

last modified: Mon Aug 25 12:47 2014


Questions or comments? Contact us at seq-info@lanl.gov.

 
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