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HIV sequence database

Codon Alignment v2.1.0

Purpose: This tool takes any DNA alignment and returns a codon alignment and translation.

How to use: Any DNA sequence or alignment is accepted. The first sequence in the file will be taken as the master sequence. For details, see Codon Alignment Explanation.

Paste your alignment here
[Sample Input]
or upload your alignment file

Codon-align starting in frame 1 2 3 all Let program decide
Allow # of codons for frameshift compensation

Release Notes: For details on releases click here.

Known Bugs: For known bugs click here.

Wish List: For desired new features click here.

last modified: Thu Oct 2 10:35 2014

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