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The HIV databases contain comprehensive data on HIV genetic sequences and immunological epitopes. The website also gives access to a large number of tools that can be used to analyze and visualize these data. This project is funded by the Division of AIDS of the National Institute of Allergy and Infectious Diseases (NIAID), a part of the National Institutes of Health (NIH). Our content is reviewed by an Editorial Board.

Sequence Database Vaccine Trials Database
Immunology Database Vaccine Trials Database

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Archived News News


Improvements to Pixel
The Pixel tool provides quality control for alignments by producing a graphic image with colored pixels corresponding to nucleotide or amino acid residues. A new Advanced version of the tool provides new color schemes and allows users more control over the appearance of the image. 07 July 2016

Improvements to Highlighter
The Highlighter tool provides a graphical view of sequence matches, mismatches, transitions, transversions, silent, and non-silent mutations in protein or nucleotide alignments. The major new feature is the highlighting of glycosylation motifs in amino acid alignments. Minor improvements include the ability to change the width of the tic marks, revised logic for transition/transversion highlighting, and new options for matches highlighting. 06 July 2016



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