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The HIV databases contain data on HIV genetic sequences, immunological epitopes, drug resistance-associated mutations, and vaccine trials. The website also gives access to a large number of tools that can be used to analyze these data. This project is funded by the Division of AIDS of the National Institute of Allergy and Infectious Diseases (NIAID), a part of the National Institutes of Health (NIH). Click on any of the links below to access a database. Editorial Board

Sequence Database Vaccine Trials Database
Immunology Database Vaccine Trials Database
Archived News News


Variable Region Characteristics
Our new tool, Variable Region Characteristics, characterizes features within a peptide excised from a protein alignment, summarizing and reporting the following peptide characteristics: length, number of N-linked glycosylation sites. It is particularly useful for characterizing hypervariable regions in Env. 10 April 2014

CATNAP: Compile, Analyze, and Tally Neutralizing Antibody Panels
Our new tool, CATNAP compiles IC50 and IC80 neutralization panel data for HIV-1 broadly neutralizing antibodies. It provides tools for meta-analysis of neutralization panel data and viral Envelope sequences. 26 February 2014

HIV Genome Browser
Our new visualization tool, Genome Browser, is a customization of JBrowse designed to provide graphic views of the HIV genome and proteome. It incorporates many sources of data from the HIV Sequence and Immunology Databases, including epitopes, entropy, functional domains, and many features of interest. 26 February 2014



Questions or comments? Contact us at seq-info@lanl.gov