HIV molecular immunology database

 

SIV Epitope Summary

Download SIV epitope summary.

This is a list of SIV epitopes from the 2006 compendium review article Beyond Mamu-A*01+ Indian Rhesus Macaques: Continued Discovery of New MHC Class I Molecules that Bind Epitopes from the Simian AIDS Viruses by Loffredo et al. (click for PDF). At the present time, these epitopes are not incorporated into our searchable databases.

MHC Class Virus Species Position Name Sequence Restricting Molecule
Class I SIVmac239 Rhesus Gag 149-157 LW9 LSPRTLNAW Mamu-A*01
Class I SIVmac239,SIVsmE660,SIVsmH4 Rhesus Gag 181-189 CM9 CTPYDINQM Mamu-A*01
Class I SIVmac239 Rhesus Gag 254-262 QI9 QNPIPVGNI Mamu-A*01
Class I SIVmac239 Rhesus Gag 372-379 LF8 LAPVPIPF Mamu-A*01
Class I SIVmac239 Rhesus Pol 147-156 LV10 LGPHYTPKIV Mamu-A*01
Class I SIVmac239 Rhesus Pol 592-600 QV9 QVPKFHLPV Mamu-A*01
Class I SIVmac239,mac251,SHIV-89.6,-HXBc2 Rhesus Pol 625-633 SV9 STPPLVRLV Mamu-A*01
Class I SIVmac251 Rhesus Pol 696-704 SV9 SGPKTNIIV Mamu-A*01
Class I SIVmac239 Rhesus Pol 696-704 SV9 SGPKANIIV Mamu-A*01
Class I SIVmac239 Rhesus Env 233-240 CL8 CAPPGYAL Mamu-A*01
Class I SIVmac239,SIVsmE660,SIVsmH4 Rhesus Env 233-241 CL9 CAPPGYALL Mamu-A*01
Class I SHIV-89.6,SHIV-HXBc2 Rhesus Env 397-405 YI9 YAPPISGQI Mamu-A*01
Class I SIVmac239 Rhesus Env 620-628 TL9 TVPWPNASL Mamu-A*01
Class I SIVsmH4,SIVsmE660 Rhesus Env 620-628 TL9 TVPWPNETL Mamu-A*01
Class I SIVmac239 Rhesus Env 726-735 ST10 SSPPSYFQQT Mamu-A*01
Class I SIVmac251 Rhesus Env 727-737 ST10 SPPSYFQTHT Mamu-A*01
Class I SIVmac239 Rhesus Tat 28-35 SL8 STPESANL Mamu-A*01
Class I SIVmac251 Rhesus Tat 28-35 TL8 TTPESANL Mamu-A*01
Class I SIVmac239 Rhesus Vif 144-152 QA9 QVPSLQYLA Mamu-A*01
Class I SIVmac239 Rhesus Vpx 8-18 II11 IPPGNSGEETI Mamu-A*01
Class I SIVmac239 Rhesus Gag 71-79 GY9 GSENLKSLY Mamu-A*02
Class I SIVmac239 Rhesus Pol 324-332 FF9 FSIPLDEEF Mamu-A*02
Class I SIVmac239 Rhesus Pol 518-526 LY9 LSQEQEGCY Mamu-A*02
Class I SIVmac239 Rhesus Env 296-304 RY9 RTIISLNKY Mamu-A*02
Class I SIVmac251 Rhesus Env 305-312 YR8 YNLTMKCR Mamu-A*02
Class I SIVmac239 Rhesus Env 317-325 KM9 KTVLPVTIM Mamu-A*02
Class I SIVmac239 Rhesus Env 359-367 QY9 QTIVKHPRY Mamu-A*02
Class I SIVmac239 Rhesus Env 519-528 GF10 GTSRNKRGVF Mamu-A*02
Class I SIVmac239 Rhesus Env 760-768 SY9 SSWPWQIEY Mamu-A*02
Class I SIVmac239 Rhesus Env 788-795 RY8 RTLLSRVY Mamu-A*02
Class I SIVmac239 Rhesus Nef 20-28 LY9 LLRARGETY Mamu-A*02
Class I SIVmac239 Rhesus Nef 110-119 TM10 TMSYKLAIDM Mamu-A*02
Class I SIVmac239,SIVmac251,SHIV-89.6(P) Rhesus Nef 159-167 YY9 YTSGPGIRY Mamu-A*02
Class I SIVmac239 Rhesus Nef 169-177 KL9 KTFGWLWKL Mamu-A*02
Class I SIVmac239 Rhesus Nef 221-229 YY9 YTYEAYVRY Mamu-A*02
Class I SIVmac239 Rhesus Nef 248-256 LM9 LTARGLLNM Mamu-A*02
Class I SIVmac239 Rhesus Vif 89-97 IW9 ITWYSKNFW Mamu-A*02
Class I SIVmac239 Rhesus Vif 97-104 WY8 WTDVTPNY Mamu-A*02
Class I SIVmac239 Rhesus Vif 104-113 YY10 YADILLHSTY Mamu-A*02
Class I SIVmac239 Rhesus Vpr 63-71 RM9 RILQRALFM Mamu-A*02
Class I SIVmac239 Rhesus Pol 782-789 YL8 YHSNVKEL Mamu-A*07
Class I SHIV-HXBc2 Rhesus Env 117-124 KP8 KPCVKLTP Mamu-A*08
Class I SIVmac239 Rhesus Gag 178-186 SI9 SEGCTPYDI Mamu-A*11
Class I SIVmac239 Rhesus Pol 92-100 AL9 AERKQREAL Mamu-A*11
Class I SIVmac239 Rhesus Pol 507-517 AI11 AEAEYEENKII Mamu-A*11
Class I SIVmac239,(SIVppm) Rhesus Env 495-502 GI8 GDYKLVEI Mamu-A*11
Class I SIVmac239 Rhesus Nef 124-132 KI9 KEKGGLEGI Mamu-A*11
Class I SIVmac239 Rhesus Vpr 13-21 RV9 REPWDEWVV Mamu-A*11
Class I SIVppm Rhesus Env 573-581 KL9 KRQQELLRL Mamu-B*03
Class I SIVppm Rhesus Nef 136-146 AL11 ARRHRILDIYL Mamu-B*03
Class I SIVppm Rhesus Nef 136-146 AL11 ARRHRILDMYL Mamu-B*03
Class I SIVppm Rhesus Nef 62-70 QP9 QGQYMNTPW Mamu-B*04
Class I SIVppm Rhesus Nef 62-69 QP8 QGQYMNTP Mamu-B*04
Class I SIVmac239 Rhesus Rev 12-20 KL9 KRLRLIHLL Mamu-B*08
Class I SIVmac239 Rhesus Rev 44-51 RL8 RRRWQQLL Mamu-B*08
Class I SIVmac239 Rhesus Nef 8-16 RL9 RRSRPSGDL Mamu-B*08
Class I SIVmac239 Rhesus Nef 137-146 RL10 RRHRILDIYL Mamu-B*08
Class I SIVmac239 Rhesus Nef 246-254 RL9 RRLTARGLL Mamu-B*08
Class I SIVmac239 Rhesus Vif 123-131 RL9 RRAIRGEQL Mamu-B*08
Class I SIVmac239 Rhesus Vif 172-179 RL8 RRDNRRGL Mamu-B*08
Class I SHIV-HXBc2 Rhesus Env 553-561 NA9 NNLLRAIEA Mamu-B*12
Class I SIVmac239 Rhesus Pol 372-379 MF8 MRHVLEPF Mamu-B*17
Class I SIVmac239 Rhesus Pol 435-443 FW9 FQWMGYELW Mamu-B*17
Class I SIVmac239 Rhesus Pol 604-613 VW10 VWEQWWTDYW Mamu-B*17
Class I SIVmac239 Rhesus Env 241-251 LF11 LRCNDTNYSGF Mamu-B*17
Class I SIVmac239 Rhesus Env 816-825 LY10 LRTELTYLQY Mamu-B*17
Class I SIVmac239 Rhesus Env 830-838 FW9 FHEAVQAVW Mamu-B*17
Class I SIVmac239 Rhesus Nef 165-173 IW9 IRYPKTFGWl Mamu-B*17
Class I SIVppm Rhesus Nef 165-173 IW9 IRFPKTFGWl Mamu-B*17
Class I SIVmac239 Rhesus Nef 195-203 MW9 MHPAQTSQW Mamu-B*17
Class I SIVmac239 Rhesus Nef 199-207 QW9 QTSQWDDPW Mamu-B*17
Class I SIVmac239 Rhesus Vif 44-52 HW9 HFKVGWAWW Mamu-B*17
Class I SIVmac239 Rhesus Vif 66-73 HW8 HLEVQGYW Mamu-B*17
Class I SIVmac239 Rhesus Vif 135-143 CY9 CRFPRAHKY Mamu-B*17
Class I SIVmac239 Burmese-rhesus Gag 206-216 IL11 IINEEAADWDL 90-120-Ia
Class I SIVmac239 Burmese-rhesus Gag 241-249 SW9 SSVDEQIQW 90-120-Ia
Class I SIVmac239 Burmese-rhesus Gag 373-380 AA8 APVPIPFA 90-120-Ia
Class I SIVmac239,SIVmac251,SHIVmn229,SHIV-SF162P3 Pigtail Gag 164-172 KP9 KKFGAEVVP Mane-A*10,Mane-A*16
Class I SIVmac239,SHIVmn229,SHIV-SF162P3 Pigtail Gag 251-258 YP8 YRQQNPIP Mane-A*11,Mane-A*12
Class I SIVmac239,SHIVmn229,SHIV-SF162P3 Pigtail Gag 371-379 AF9 ALAPVPIPF Mane-A*17
Class I SIVmac239,SHIVmn229,SHIV-SF162P3 Pigtail Gag 28-36 KW9 KYMLKHVVW Mane-B*10
Class I SIVmac32H-J5 Cynomolgus Gag 242-250 SM9 SVDEQIQWM Mafa-A*02
Class II SIVmac239 Rhesus Gag 102-111 QE10 QIVQRHLVVE DRBw*606
Class II SIVmac239 Rhesus Gag 103-112 IT10 IVQRHLVVET DRBw*606
Class II SIVmac239 Rhesus Gag 184-193 YV10 YDINQMLNCV DRBw*2104
Class II SIVmac239 Rhesus Gag 197-211 GA15 QAAMQIIRDIINEEA DRB1*0306
Class II SIVmac239 Rhesus Gag 260-274 GC15 GNIYRRWIQLGLQKC DRB*w201
Class II SHIV-89.6(-HXBc2) Rhesus Env 172-191 EY20 EYAFFYKLDIIPIDNDTTSY DRB*w201
Class II SHIV-89.6(-HXBc2) Rhesus Env 242-261 VL20 VSTVQCTHGIRPVVSTQLLL DRB1*0406
Class II SHIV-89.6(-HXBc2) Rhesus Env 486-494 YL9 YKVVKIEPL DRB*w201
Class II SIVmac239 Rhesus Rev 11-23 RT13 RKRLRLIHLLHQT DRB*w201
Class II SIVmac239 Rhesus Rev 13-23 RT11 RLRLIHLLHQT DPB1*06
Class II SIVmac239 Rhesus Nef 138-152 RI15 RHRILDIYLEKEEGI DRBw*606
Class II SIVmac239 Rhesus Vpx 31-40 EL10 EINREAVNHL DRB1*1003
Class II SIVmac239 Rhesus Vpx 32-41 IP10 INREAVNHLP DRB1*1003
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