HIV molecular immunology database

 

CTL/CD8+ Epitope Summary

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This is a list of all experimentally-verified HIV CTL/CD8+ epitopes mapped to within a region of 14 amino acids or less. The protein, HXB2 location, host species, and HLA restriction elements are provided. Identical sequences are shown only once. The epitope sequence is a link to the database that will provide details of all epitopes containing that sequence. There is also a separate summary table for a set of the best-defined HIV CTL/CD8+ epitopes.

Data last updated at 2014-11-04 11:08:57-07
Epitope Protein HXB2 location Subprotein HXB2 DNA Contig Subtype Species HLA
MGARASVLSG Gag 1-10 p17(1-10) 790..819 CRF01_AE human  
ASVLSGGEL Gag 5-13 p17(5-13) 802..828 B human  
ASILRGGKLDK Gag 5-15 p17(5-15) 802..834 C human  
ASVLSGGELDRWEK Gag 5-18 p17(5-18) 802..843 B human  
SVLSGGQLDR Gag 6-15 p17(6-15) 805..834 B human A11
SVLSGGELDRWEKI Gag 6-19 p17(6-19) 805..846 B human  
LSGGELDRWEK Gag 8-18 p17(8-18) 811..843   macaque  
GELDRWEKI Gag 11-19 p17(11-19) 820..846 B human B*4002, B40
GQLDRWEKI Gag 11-19 p17(11-19) 820..846 B human  
GKLDAWEKIRLR Gag 11-22 p17(11-22) 820..855 CRF01_AE human  
GKLDSWEKIRLR Gag 11-22 p17(11-22) 820..855 A, CRF01_AE, CRF02_AG human  
ELDRWEKIRL Gag 12-21 p17(12-21) 823..852 B, C human B63
EKIRLRPGGKKYKL Gag 17-31 p17(17-31) 838..882   human B27, B7
KIRLRPGGK Gag 18-26 p17(18-26) 841..867 A, B, CRF01_AE human, transgenic mouse A*0301, A11, A3, B27, B7
KIRLRPGGKK Gag 18-27 p17(18-27) 841..870 B, C, multiple human A*0301, A*11, A11, A3, B*2705, B27, B35, B7
KIRLRPGGKKKYKL Gag 18-31 p17(18-31) 841..882   human A3, B62
IRLRPGGKK Gag 19-27 p17(19-27) 844..870 B human, scid-hu mouse B*2705, B27
IRLRPGGKKK Gag 19-28 p17(19-28) 844..873 multiple human A11, A3, B62
RLRPGGKKK Gag 20-28 p17(20-28) 847..873 A, A1, B, C, CRF02_AG, multiple human A*0201, A*0301, A11, A3, A30, A31, A68, B42, B62, B7
RPRPGGKKK Gag 20-28 p17(20-28) 847..873   human A3
RLRQGGKKK Gag 20-28 p17(20-28) 847..873 B human A3
LYNTVATL Gag 20-28 p17(20-28) 847..873 B, D human, mouse A24, Cw*1402, Cw14, H-2d
RLRPGGKKKY Gag 20-29 p17(20-29) 847..876 A, A1, B, C, D human A*0301, A3, A30, B*15, B42, B62
RLRPGGKKKKY Gag 20-29 p17(20-29) 847..876 B human A3
RLRPGGKKKK Gag 20-29 p17(20-29) 847..876 B, F human A3
RLRPGGKKHY Gag 20-29 p17(20-29) 847..876 C human A*3002, B*4201
RLRPGGKKHYM Gag 20-30 p17(20-30) 847..879 C human  
RLRPGGKKKYK Gag 20-30 p17(20-30) 847..879   human  
RLRPGGKKRYRL Gag 20-31 p17(20-31) 847..882 A, CRF01_AE, CRF02_AG human  
LRPGGKKKY Gag 21-29 p17(21-29) 850..876 B human  
RPGGKKHY Gag 22-29 p17(22-29) 853..876 A, C, D human B42, B7
RPGGKKHYM Gag 22-30 p17(22-30) 853..879 C human B*0702, B*4201, B*4202
RPGGKKKKYK Gag 22-30 p17(22-30) 853..879 B human B7
RPGGKKRYM Gag 22-30 p17(22-30) 853..879 C human  
RPGGKKKYML Gag 22-31 p17(22-31) 853..882 A, C, D human B*0702, B*4201
RPGGKKKYKL Gag 22-31 p17(22-31) 853..882 B, D human B*5101, Cw4
RPGGKKRYKL Gag 22-31 p17(22-31) 853..882   human B7
PGGKKRYRLKHL Gag 23-34 p17(23-34) 856..891 A, CRF02_AG human  
GGKKKYKL Gag 24-31 p17(24-31) 859..882 A, B, CRF02_AG, D human B*0801, B8
GGKKKYRL Gag 24-31 p17(24-31) 859..882   human B*0801, B8
GGKKKYKLK Gag 24-32 p17(24-32) 859..885 A1, B, F human B*0801, B8
GGKKKYKLKHIV Gag 24-35 p17(24-35) 859..894   human B8
KRYMIKHLV Gag 27-35 p17(27-35) 868..894 C human  
KYKLKHIVW Gag 28-36 p17(28-36) 871..897 A1, B, C, CRF01_AE, F human A*23, A*2402, A*2602, A23, A24
HYMLKHIVW Gag 28-36 p17(28-36) 871..897 A, C human A*2301
HYMLKHLVW Gag 28-36 p17(28-36) 871..897 A1, B, C human A*2301, A*2402
KYMLKHIVW Gag 28-36 p17(28-36) 871..897 C human A24
KYRLKHIVW Gag 28-36 p17(28-36) 871..897 B human A*2402
KYRLKHLVW Gag 28-36 p17(28-36) 871..897 A, B human Cw4
HYMLNHIVW Gag 28-36 p17(28-36) 871..897 A, C, D human  
HYMLKHLVWAS Gag 28-38 p17(28-38) 871..903 C human  
YKLKHIVWA Gag 29-37 p17(29-37) 874..900 B human  
HLVWASREL Gag 33-41 p17(33-41) 886..912 C human Cw*0602, Cw*0804
IVWASRELER Gag 34-43 p17(34-43) 889..918 B human A11
LVWASRELERF Gag 34-44 p17(34-44) 889..921 B, C human A*3002, A30, B*5703, B57
WASRELERF Gag 36-44 p17(36-44) 895..921 B, C, CRF01_AE human B*3501, B35
ERFAVNPGL Gag 42-50 p17(42-50) 913..939 B human B27
ERFAVNPGLL Gag 42-51 p17(42-51) 913..942 B human B27
RFAVNPGLL Gag 43-51 p17(43-51) 916..942 B, C human B63
FAVNPGLLE Gag 44-52 p17(44-52) 919..945 B human  
NPGLLETSE Gag 47-55 p17(47-55) 928..954 B human  
GLLESSEGC Gag 49-57 p17(49-57) 934..960 B human A2
QILEQLQPA Gag 59-67 p17(59-67) 964..990 B human A2
QILEQLQPAL Gag 59-68 p17(59-68) 964..993 B human A2
QLQPSLQTGS Gag 63-72 p17(63-72) 976..1005 B human A2
GSEELKSLY Gag 71-79 p17(71-79) 1000..1026   human A*01
GSEELRSLY Gag 71-79 p17(71-79) 1000..1026 B human A*01, A*0101, A1
GTEELRSLY Gag 71-79 p17(71-79) 1000..1026 A human A*0101
EELRSLYNT Gag 73-81 p17(73-81) 1006..1032 A1 human  
EELRSLYNTV Gag 73-82 p17(73-82) 1006..1035 C human B*4006
ELRSLYNTV Gag 74-82 p17(74-82) 1009..1035 A1, B, CRF01_AE, F human A*0801, B*0801, B8
ELKSLYNTV Gag 74-82 p17(74-82) 1009..1035   human B8
ELKSLFNTI Gag 74-82 p17(74-82) 1009..1035 B human B8
ELRSLYNTVA Gag 74-83 p17(74-83) 1009..1038 multiple human A2
RSLYNTVATLY Gag 76-86 p17(76-86) 1015..1047 A1, B, C, F human, macaque A*0201, A*3002, A30, B57, B58, B63
RSLYNTVAVLY Gag 76-86 p17(76-86) 1015..1047 B, F human A30
RSLYNTATLY Gag 76-86 p17(76-86) 1015..1047   human A30
RLSYNTVATLY Gag 76-86 p17(76-86) 1015..1047 C human A*3002
RSLFNTVATLY Gag 76-86 p17(76-86) 1015..1047 B human  
KSLYNTVCV Gag 76-88 p17(76-88) 1015..1053   mouse H-2Db
SLYNTVATL Gag 77-85 p17(77-85) 1018..1044 A, A1, B, C, CRF02_AG, D, F, G, K human, humanized mouse, mouse, transgenic mouse A*02.01, A*0201, A*0202, A*0205, A*0214, A2, A68
SLFNTVATL Gag 77-85 p17(77-85) 1018..1044 A, B, C human A*0201, A2
SLYNTVAAL Gag 77-85 p17(77-85) 1018..1044   human A*0201
SLYNTIATL Gag 77-85 p17(77-85) 1018..1044 B, CRF01_AE human A*0201, A2
SLYNTVVTL Gag 77-85 p17(77-85) 1018..1044 B human A*0201
SLYNTVAVL Gag 77-85 p17(77-85) 1018..1044 B human A2
SLYNTAVTL Gag 77-85 p17(77-85) 1018..1044   human A2
SLYNTVATLY Gag 77-86 p17(77-86) 1018..1047 B, multiple human A*0201, A2
SLFNTVATLY Gag 77-86 p17(77-86) 1018..1047 C human  
SLYNIVATLWCVH Gag 77-89 p17(77-89) 1018..1056 CRF02_AG human  
TSTLQEQIGW Gag 78-85 p17(78-85) 1021..1044 A1, B, C, CRF01_AE, HIV-2 human A*0201, A2, B*2705, B*5701, B*5703, B*58, B*5801, B57, B58, B63, B7
LYNTVATLY Gag 78-86 p17(78-86) 1021..1047 B, C human A*2902, A29, B*4403, B44
LFNTVATLY Gag 78-86 p17(78-86) 1021..1047 B, C human A*2902
YNIVATLWCVHQ Gag 79-90 p17(79-90) 1024..1059 CRF01_AE, CRF02_AG human  
NTVATLYCV Gag 80-88 p17(80-88) 1027..1053   human, transgenic mouse A2
VATLYCVHQ Gag 82-90 p17(82-90) 1033..1059 B human  
IATLWCVHQR Gag 82-91 p17(82-91) 1033..1062 CRF01_AE human A11
IAVLYCVHQR Gag 82-91 p17(82-91) 1033..1062 B   A*11
VATLYCVHQRI Gag 82-92 p17(82-92) 1033..1065   human A*11
AVLYCVHQR Gag 83-91 p17(83-91) 1036..1062 B human A11
ATLYCVHQR Gag 83-91 p17(83-91) 1036..1062 B human A*11
ATLYCVHQK Gag 83-91 p17(83-91) 1036..1062 B, C human  
ATLWCVHQRIDI Gag 83-94 p17(83-94) 1036..1071 CRF01_AE, CRF02_AG human  
TLYCVHQR Gag 84-91 p17(84-91) 1039..1062 B human A*1101, A11
TLYCVHQK Gag 84-91 p17(84-91) 1039..1062   human A*1101
TLYCVHQRI Gag 84-92 p17(84-92) 1039..1065 B, F human A*11, A11
TLYCVHQKI Gag 84-92 p17(84-92) 1039..1065 B human A*1103
VLYCVHQRI Gag 84-92 p17(84-92) 1039..1065 B human A2
LYCVHQKI Gag 85-92 p17(85-92) 1042..1065 D human A24
LYCVHQRI Gag 85-92 p17(85-92) 1042..1065 B mouse H-2d
YCVHAGIEVRD Gag 86-96 p17(86-96) 1045..1077 C human  
CVHQRIEIK Gag 87-95 p17(87-95) 1048..1074 B human A11
HQRIEIKDTK Gag 89-98 p17(89-98) 1054..1083 B human A11
RIDVKDTKEAL Gag 91-101 p17(91-101) 1060..1092   human  
IEIKDTKEAL Gag 92-101 p17(92-101) 1063..1092 B, F human B*4001, B40, B60, B61
IDIKDTKEAL Gag 92-101 p17(92-101) 1063..1092   human B*4001
EIKDTKEAL Gag 93-101 p17(93-101) 1066..1092 B, CRF01_AE human B*60, B60, B8
EVKDTKEAL Gag 93-101 p17(93-101) 1066..1092 B human B*0801, B8
DVKDTKEAL Gag 93-101 p17(93-101) 1066..1092   human  
KIEEEQNKSK Gag 103-112 p17(103-112) 1096..1125 B human A11
KTQQAAADK Gag 114-122 p17(114-122) 1129..1155 B, F human B57
AADTGNSSQ Gag 119-127 p17(119-127) 1144..1170 B human  
DTGHSNQVSQNY Gag 121-132 p17(121-132) 1150..1185 B human A33
GNSSQVSQNY Gag 123-132 p17(123-132) 1156..1185 B human  
NSSKVSQNY Gag 124-132 p17(124-132) 1159..1185 B human B*3501, B35
NSSQVSQNY Gag 124-132 p17(124-132) 1159..1185 B human B*3501
NSSQVSQNYP Gag 124-133 p17(124)-p24(1) 1159..1188 B human  
GKKVSQNYPIV Gag 125-135 p17(125)-p24(3) 1162..1194 C human  
QVSQNYPIV Gag 127-135 p17(127)-p24(3) 1168..1194 B, D human A*68, A*6802, A68
SQNYPIVQNIQ Gag 129-139 p17(129)-p24(7) 1174..1206   macaque  
NYPIVQNL Gag 131-138 p17(131)-p24(6) 1180..1203 B human A*2402
VQNLQGQMV Gag 135-143 p24(3-11) 1192..1218 A1, B, C human B*1302, B13
LQGQMVHQAI Gag 138-147 p24(6-15) 1201..1230     B*4801
QGQMVHQSL Gag 139-147 p24(7-15) 1204..1230 A1 human  
GQMVHQAI Gag 140-147 p24(8-15) 1207..1230   human B*4801
GQMVHQAIS Gag 140-148 p24(8-16) 1207..1233 B human  
GQMVHQAISP Gag 140-149 p24(8-17) 1207..1236 A, B, C, D human B*5802, B57
GQMVHQAISPR Gag 140-150 p24(8-18) 1207..1239 C human A*7401
GQMVHQAISPRTL Gag 140-152 p24(8-20) 1207..1245   human Cw3
GQMVHQAISPRTLN Gag 140-153 p24(8-21) 1207..1248 B, CRF01_AE human A3, Cw3
QMVHQAISPR Gag 141-150 p24(9-18) 1210..1239 B human A3 supertype
MVHQAISPR Gag 142-150 p24(10-18) 1213..1239 B human A3 supertype
MVHQSMSPRTLNAW Gag 142-155 p24(10-23) 1213..1254 A, CRF02_AG human  
VHQAISPRTL Gag 143-152 p24(11-20) 1216..1245 C human B*1510
VQHAISPRTLNAWV Gag 143-156 p24(11-24) 1216..1257   human  
HQAISPRTL Gag 144-152 p24(12-20) 1219..1245 B chimpanzee, human B*15, B*1510, Patr-B2
HQSLSPRTL Gag 144-152 p24(12-20) 1219..1245 A1 human  
HQPISPRTL Gag 144-152 p24(12-20) 1219..1245 B human  
QAISPRTL Gag 145-152 p24(13-20) 1222..1245 B human Cw*07, Cw3
QAISPRTLNAW Gag 145-155 p24(13-23) 1222..1254 B human A*25, A*2501, A25, B57
QAISPRTLNAV Gag 145-155 p24(13-23) 1222..1254   human A25
SLSPRTLNA Gag 146-154 p24(14-22) 1225..1251 A1 human  
AISPRTLNAW Gag 146-155 p24(14-23) 1225..1254 A1, B, C, CRF02_AG human B57, B58, B63
AISPRTNLAW Gag 146-155 p24(14-23) 1225..1254 C human B*5801, B57
ISPRTLNAW Gag 146-155 p24(14-23) 1225..1254 A, A1, B, C, D human B*15, B*5701, B*5702, B*5703, B*58, B*5801, B57, B58, B63, Cw*0602
AISPRTLNAWV Gag 146-156 p24(14-24) 1225..1257 B human B57
ISPRTNLAW Gag 147-155 p24(15-23) 1228..1254 B human B57
LSPRTLNAW Gag 147-155 p24(15-23) 1228..1254 A, A1, C human B*5703, B*5801, B57, B58
TPQDLNTML Gag 147-155 p24(15-23) 1228..1254 A, A1, B, C, D human, transgenic mouse B*0702, B*3910, B*4201, B*4202, B*5301, B*8101, B39, B42, B53, B7, B81, Cw*0802, Cw8
ISPRTLNAWV Gag 147-156 p24(15-24) 1228..1257 C human B*5702, B*5703
ISPRTLNAWVKV Gag 147-158 p24(15-26) 1228..1263 B, C, M mouse  
SPRTLNAWV Gag 148-156 p24(16-24) 1231..1257 A, A1, B, C, CRF02_AG, D chimpanzee, human, transgenic mouse B*0702, B*8101, B7
SPRTLNAWVKV Gag 148-158 p24(16-26) 1231..1263 A, D human B7
PRTLNAWVKVVE Gag 149-160 p24(17-28) 1234..1269   human  
RLLNAWVKV Gag 150-158 p24(18-26) 1237..1263 A, B, CRF02_AG human, transgenic mouse A*0201, A2
RTLNAWVKV Gag 150-158 p24(18-26) 1237..1263   human, transgenic mouse A2
TLNAWVKW Gag 151-158 p24(19-26) 1240..1263   transgenic mouse A*0201
TLNAWVKVV Gag 151-159 p24(19-27) 1240..1266 B human, transgenic mouse A*02.01, A*0201, A*0202, A2
TLNAWVKVI Gag 151-159 p24(19-27) 1240..1266 A, B, C, D human, transgenic mouse A*0201, A2
TLNAWVKLV Gag 151-159 p24(19-27) 1240..1266   human A*0201
NAWVKIEEK Gag 153-162 p24(21-30) 1246..1275 B human  
NAWVKVVEEKA Gag 153-163 p24(21-31) 1246..1278   macaque  
VKVIEEKAF Gag 156-164 p24(24-32) 1255..1281 B, C human B*1503, B15
VKVVEEKAF Gag 156-164 p24(24-32) 1255..1281 B, C human B*1503
IEEKAFSPEV Gag 159-168 p24(27-36) 1264..1293 C human  
IEEKAFSPEVI Gag 159-169 p24(27-37) 1264..1296 C human B*4501
EEKAFSPEV Gag 160-168 p24(28-36) 1267..1293 A, A1, B, C, D human B*4415, B*4501, B44
EKAFSPEV Gag 161-168 p24(29-36) 1270..1293 C human  
EKAFSPEVIPM Gag 161-171 p24(29-39) 1270..1302   macaque  
KAFSPEVIPMF Gag 161-173 p24(29-41) 1270..1308 A, A1, ACD, B, C, CRF02_AG, D, G human A*0201, B*4801, B*5701, B*5703, B*58, B*5801, B57, B58, B63
KAFSPEVI Gag 162-169 p24(30-37) 1273..1296 A1, B human B*5703, B57
RAFSPEVIP Gag 162-170 p24(30-38) 1273..1299 A, B, C human B57
KAFSPEVIP Gag 162-170 p24(30-38) 1273..1299 A1 human  
KGFNPEVIPMF Gag 162-172 p24(30-40) 1273..1305   human B*5701
AFSPEVIPMFT Gag 163-173 p24(31-41) 1276..1308 C human  
AFSPEVIPMFSALS Gag 163-176 p24(31-44) 1276..1317 B human  
FSPEVIPMF Gag 164-172 p24(32-40) 1279..1305 A1, B, C human, macaque B57, B58, B63, Mamu A*01
SPEVIPMF Gag 165-172 p24(33-40) 1282..1305 C human  
EVIPMFSAL Gag 167-175 p24(35-43) 1288..1314 A, B, C, CRF01_AE, D human A*26, A*2601, A*2602, A*2603, A26, Cw3
EVIPMFTAL Gag 167-175 p24(35-43) 1288..1314 C human A*2601, A*2638
VIPMFSAL Gag 168-175 p24(36-43) 1291..1314 B, D human Cw*01, Cw*0102, Cw1, Cw2
VIPMSFAL Gag 168-175 p24(36-43) 1291..1314 B human Cw*0102
VIPMFSALS Gag 168-176 p24(36-44) 1291..1317 A1 human  
PMFSALSEG Gag 170-178 p24(38-46) 1297..1323 A1 human  
PMFTALSEGAT Gag 170-180 p24(38-48) 1297..1329 C human  
MFSALSEGA Gag 171-179 p24(39-47) 1300..1326 B mouse H-2d
FSALSEGAT Gag 172-180 p24(40-48) 1303..1329 A1 human  
ALSEGATPQDL Gag 174-184 p24(42-52) 1309..1341 C human  
ALSEGATPQDLNMM Gag 174-187 p24(42-55) 1309..1350 A, CRF01_AE, CRF02_AG human  
LSEGATPQD Gag 175-183 p24(43-51) 1312..1338 A1 human  
LSEGATPQDL Gag 175-184 p24(43-52) 1312..1341 A, B human B*4403, B42, B44
SEGATPQDL Gag 176-184 p24(44-52) 1315..1341 B, CRF02_AG human B*4001, B40, B44, B60, B61
EGATPQDLNMML Gag 177-188 p24(45-56) 1318..1353 A, CRF01_AE, CRF02_AG human  
GATPQDLNM Gag 178-186 p24(46-54) 1321..1347 A1 human  
GATPQDLNMMLNIV Gag 178-191 p24(46-59) 1321..1362 A, CRF01_AE, CRF02_AG human  
GATPQDLNTMLNTV Gag 178-191 p24(46-59) 1321..1362   human  
ATPQDLNTM Gag 179-187 p24(47-55) 1324..1350   human B7
ATPQDLNTML Gag 179-188 p24(47-56) 1324..1353 B human B*58, B7
ATPQDLNMML Gag 179-188 p24(47-56) 1324..1353 A human B53
CTPYDINQML Gag 179-188 p24(47-56) 1324..1353   macaque  
CTPYDINQMLNC Gag 179-190 p24(47-58) 1324..1359 HIV-2 human B58
ATPQDLNTMLNT Gag 179-190 p24(47-58) 1324..1359 B, C, D human B*5802, B58
TPQDLNTM Gag 180-187 p24(48-55) 1327..1350 C human, transgenic mouse B*8101, B7
TPQDLNTMLNT Gag 180-188 p24(48-56) 1327..1353 B, C human B14
TPQDLNTNL Gag 180-188 p24(48-56) 1327..1353 A1 human B*4201
TPQDLNMML Gag 180-188 p24(48-56) 1327..1353 A, CRF02_AG human B*4202, B*5301, B53
TPYDINQML Gag 180-188 p24(48-56) 1327..1353 A, CRF02_AG, HIV-2 human B*5301, B*5801, B53
TPQDLNQML Gag 180-188 p24(48-56) 1327..1353   human B53
TPQDLNTML ? Gag 180-188 p24(48-56) 1327..1353   human B81
TPQDLNTMLN Gag 180-189 p24(48-57) 1327..1356 B, C, D, multiple human B14, B7
TPQDLNMMLN Gag 180-189 p24(48-57) 1327..1356 multiple human B7
TPQDLNQMLNTV Gag 180-191 p24(48-59) 1327..1362 B, G human B58
PQDLNTMLN Gag 181-189 p24(49-57) 1330..1356 B human B14, Cw7, Cw8
PQDLNTMLNTV Gag 181-191 p24(49-59) 1330..1362 B human B14
DLNMMLNIV Gag 183-191 p24(51-59) 1336..1362 A human B14
DLNTMLNTV Gag 183-191 p24(51-59) 1336..1362 B chimpanzee, human B*1402, B14, Cw8
DLNTMLNTVG Gag 183-192 p24(51-60) 1336..1365 multiple human A2, B14
LNMMLNIVG Gag 184-192 p24(52-60) 1339..1365 A1 human  
NTMLNTVGGHQAAM Gag 185-198 p24(53-66) 1342..1383 C human  
MMLNIVGGH Gag 186-194 p24(54-62) 1345..1371 A1 human  
LNIVGGHQA Gag 188-196 p24(56-64) 1351..1377 A1 human  
VGGHQAAMQMLKET Gag 191-204 p24(59-72) 1360..1401 B, C, CRF01_AE human  
GGHQAAMQMLK Gag 192-202 p24(60-70) 1363..1395 C human  
GHQAAMQML Gag 193-201 p24(61-69) 1366..1392 B, C human B*1510, B*3901, B15, B38, B39
GHQAAMQMLKE Gag 193-203 p24(61-71) 1366..1398 B human A2
GHQAAMQMLKD Gag 193-203 p24(61-71) 1366..1398 C, D human A2
GHQAAMEMLKD Gag 193-203 p24(61-71) 1366..1398 A, B human A2
HQAAMQMLK Gag 194-202 p24(62-70) 1369..1395 A1, B human A11, B52
HQAAMQMLKETINE Gag 194-207 p24(62-75) 1369..1410 CRF01_AE human  
AMQMLKET Gag 197-204 p24(65-72) 1378..1401 B mouse H-2d
AMQMLKETI Gag 197-205 p24(65-73) 1378..1404 A, B, CRF01_AE, CRF02_AG human, mouse A2, H-2d, H-2kd, H-2Dd, H-2Kd
AMQMLKDTI Gag 197-205 p24(65-73) 1378..1404 A, B, BC, C human, mouse H-2d, H-2Kd
ANQMLKDTI Gag 197-205 p24(65-73) 1378..1404 C mouse H-2d
AMQMLKETI? Gag 197-205 p24(65-73) 1378..1404   mouse  
AMQILKDTI Gag 197-205 p24(65-73) 1378..1404 B, C mouse  
MQMLKDTINEEAAE Gag 198-211 p24(66-79) 1381..1422 A, CRF01_AE human  
KETINEEAA Gag 202-210 p24(70-78) 1393..1419 B human B*4002, B40
KDTINEEAAEWDRL Gag 202-215 p24(70-83) 1393..1434 A, CRF01_AE human  
ETINEEAAEW Gag 203-212 p24(71-80) 1396..1425 A, B, D human A*25, A*2501, A25, B*5301, B53, B58
ETINEEAAAEW Gag 203-212 p24(71-80) 1396..1425   human A*2501
DTINEEAAEW Gag 203-212 p24(71-80) 1396..1425 A, B, C human B*5301, B*5801, B53
TINEEAAEW Gag 204-212 p24(72-80) 1399..1425 B human B57
EEAAEWDRL Gag 207-215 p24(75-83) 1408..1434 A1, B, F human B40
EEAAEWDRV Gag 207-215 p24(75-83) 1408..1434 B human B40
EAAEWDRLH Gag 208-216 p24(76-84) 1411..1437 A1 human  
AAEWDRLHP Gag 209-217 p24(77-85) 1414..1440 A1 human  
AAEWDRLHPV Gag 209-218 p24(77-86) 1414..1443 B human  
AAEWDRLHPVH Gag 209-219 p24(77-87) 1414..1446 C human  
AEWDRLHPV Gag 210-218 p24(78-86) 1417..1443 B, C, F human A2, B*4002, B*4006, B40
AEWDRVHPV Gag 210-218 p24(78-86) 1417..1443 B human B*4002, B40
EWDRVHPV Gag 211-218 p24(79-86) 1420..1443 B human A2
DRVHPVHAGPI Gag 213-223 p24(81-91) 1426..1458   macaque  
RLHPVHAGP Gag 214-222 p24(82-90) 1429..1455 A1 human  
RLHPVHAGPIA Gag 214-224 p24(82-92) 1429..1461 C human  
LHPVHAGPI Gag 215-223 p24(83-91) 1432..1458 B human  
VHPVHAGPIA Gag 215-224 p24(83-92) 1432..1461   human B55
HPVHAGPI Gag 216-223 p24(84-91) 1435..1458 D human B35
HPVHAGPV Gag 216-223 p24(84-91) 1435..1458 B human B35
HPVHAGPIA Gag 216-224 p24(84-92) 1435..1461 B, C, D, F human B*0702, B*3501, B*3910, B35, B39, B7
HPVHAGPVA Gag 216-224 p24(84-92) 1435..1461 A1, B, C, D human B7, B7 supertype
HVPHAGPIA Gag 216-224 p24(84-92) 1435..1461 B, C, D human, mouse B7 supertype
VHAGPIPPG Gag 218-226 p24(86-94) 1441..1467 A1 human  
GPIAPGQM Gag 221-228 p24(89-96) 1450..1473 C, D human B35
IGPGRARYAR Gag 223-232 p24(91-100) 1456..1485   mouse H-2D
PGQMREPRG Gag 225-233 p24(93-101) 1462..1488 A1 human  
GQMREPRGSDI Gag 226-236 p24(94-104) 1465..1497 B, C human B13
GQMREPRGSDIA Gag 226-237 p24(94-105) 1465..1500 C human  
MREPRGSDI Gag 228-236 p24(96-104) 1471..1497 A1 human  
SDIAGTTST Gag 234-242 p24(102-110) 1489..1515 A1 human  
IAGTTSTLQ Gag 236-244 p24(104-112) 1495..1521 A1 human  
GTTSTLQEQ Gag 238-246 p24(106-114) 1501..1527 A1 human  
TTSTLQEQI Gag 239-247 p24(107-115) 1504..1530 A, B, C mouse H-2Kd
TTSTLQEQIA Gag 239-248 p24(107-116) 1504..1533 C human A*6802
TSTLQEQIAW Gag 240-249 p24(108-117) 1507..1536 B, C human B*5701, B*5702, B*5703, B*58, B*5801, B57, B58
TSTPQEQIGW Gag 240-249 p24(108-117) 1507..1536 A1 human B57
TSTLQEQVGW Gag 240-249 p24(108-117) 1507..1536 B human B*5701
TSTLQEQIGN Gag 240-249 p24(108-117) 1507..1536 B human B*5701
TSTVEEQQIW Gag 240-249 p24(108-117) 1507..1536 HIV-2 human B58
TSTVEEQIQW Gag 240-249 p24(108-117) 1507..1536 HIV-2 human B*5801
TSTLQEQVAW Gag 240-249 p24(108-117) 1507..1536 C human  
TSTLQRQIGW Gag 240-249 p24(108-117) 1507..1536   human  
TSTLQEQIGWF Gag 240-250 p24(108-118) 1507..1539 B, F human B*5801, B57, B58
STLQEQIGW Gag 241-249 p24(109-117) 1510..1536 B, CRF02_AG, D human B*5701, B*5801, B57, B58
STLQEQIAW Gag 241-249 p24(109-117) 1510..1536 B human  
STLQEQIGWM Gag 241-250 p24(109-118) 1510..1539 B human A2
TLQEQIGWM Gag 242-250 p24(110-118) 1513..1539 A1, CRF01_AE human A2
NLQEQIGWM Gag 242-250 p24(110-118) 1513..1539 B human A2
NLQEQIGWMT Gag 242-251 p24(110-119) 1513..1542 B human A2
QEQIGWMTG Gag 244-252 p24(112-120) 1519..1545 A1 human  
KRWIILGLN Gag 244-252 p24(112-120) 1519..1545 A1 chimpanzee, human Patr-B3
WMTNNPPIPV Gag 249-258 p24(117-126) 1534..1563 B human A2
MTNNPPIPV Gag 250-258 p24(118-126) 1537..1563 B, multiple human, mouse A*0201, A2, A2 supertype, A3, B7
MTSNPPIPV Gag 250-258 p24(118-126) 1537..1563 M human, mouse A*0201
NPPIPVGDI Gag 253-261 p24(121-129) 1546..1572 A mouse H-2Dd, H-2Ld
NPPIPVGDIY Gag 253-262 p24(121-130) 1546..1575 C human B*3501
NPPIPVGEIY Gag 253-262 p24(121-130) 1546..1575 B human B*3501
PPIPVGDIY Gag 254-262 p24(122-130) 1549..1575 A, B, C, CRF02_AG human B*3501, B*3502, B35
PPIPVGEIY Gag 254-262 p24(122-130) 1549..1575 A, B, C, D human B*3501, B35, B53, B7 supertype
PPVPVGDIY Gag 254-262 p24(122-130) 1549..1575 C human B35
NPVPVGNIY Gag 254-262 p24(122-130) 1549..1575 A, B, C, CRF02_AG, HIV-2 human B*3501, B35
PPIPVGDIH Gag 254-262 p24(122-130) 1549..1575   human  
PIPVGDIYK Gag 255-263 p24(123-131) 1552..1578 B, C human  
PVGDIYKRWII Gag 257-267 p24(125-135) 1558..1590 C human  
VGEIYKRWIIGLNK Gag 258-272 p24(126-140) 1561..1605 B human  
GDIYWKRWI Gag 259-266 p24(127-134) 1564..1587 C human B*0801
GEIYKRWII Gag 259-267 p24(127-135) 1564..1590 A, B, C, CRF02_AG, D human B*0801, B8
GDIYKRWII Gag 259-267 p24(127-135) 1564..1590   human B*0801
GEIYKRWIIL Gag 259-268 p24(127-136) 1564..1593 B human A24, B*0801, B8
EIYKRWII Gag 260-267 p24(128-135) 1567..1590 B human A*0201, B*0801, B8
DIYKRWII Gag 260-267 p24(128-135) 1567..1590 B, C human B*0801, B8
EIYRKWII Gag 260-267 p24(128-135) 1567..1590   human B8
EIYKRWII ? Gag 260-267 p24(128-135) 1567..1590   human B8
EIYKRWIIL Gag 260-268 p24(128-136) 1567..1593 B, D human A*2402, A2, A24, B8
IYKRWIIL Gag 261-268 p24(129-136) 1570..1593 B human A*2402, A24, B8
IYKRWIILG Gag 261-269 p24(129-137) 1570..1596 B human A*2402
IYKRWIILGL Gag 261-270 p24(129-138) 1570..1599 B, D human, mouse A*2402, A24, B27, H-2d
IYKRWIILGLNK Gag 261-272 p24(129-140) 1570..1605 A, B, C, CRF01_AE human A24
KRWIILGLNK Gag 263-272 p24(131-140) 1576..1605 A, A1, B, C, CRF01_AE, CRF02_AG, D human, macaque, mouse A*0201, B*2705, B27
KRWIILGNK Gag 263-272 p24(131-140) 1576..1605   human B27
KRWIIMGLNK Gag 263-272 p24(131-140) 1576..1605 B human B*2705, B27
KRWIIMGNK Gag 263-272 p24(131-140) 1576..1605   human B27
RRWIQLGLQK Gag 263-272 p24(131-140) 1576..1605   human, macaque B*2703, B*2705, B27
KRWIIMGLHK Gag 263-272 p24(131-140) 1576..1605 B human B27
KIRWIIGLNK Gag 263-272 p24(131-140) 1576..1605 B human B27
KRWIIILGLNK Gag 263-272 p24(131-140) 1576..1605 B human B27
KRWIILGGLNK Gag 263-272 p24(131-140) 1576..1605   human B*2705
KRWILLGLNK Gag 263-272 p24(131-140) 1576..1605 B human  
KRWILGLNKIV Gag 263-274 p24(131-142) 1576..1611   human B27
KRWIILGLNKIV Gag 263-274 p24(131-142) 1576..1611 B human B27
KRWILGLNKIVRMY Gag 263-277 p24(131-145) 1576..1620   human  
RWIILGLNK Gag 264-272 p24(132-140) 1579..1605 B human B27
KWILGLNKIVRMY Gag 264-277 p24(132-145) 1579..1620   human B27
LGLNKIVRM Gag 265-273 p24(133-141) 1582..1608 A, A1 human  
WIILGLNKI Gag 265-273 p24(133-141) 1582..1608 A1 human  
IILGLNKI Gag 266-273 p24(134-141) 1585..1608 B human A2, A3
IILGLNKIV Gag 266-274 p24(134-142) 1585..1611 B human A2
IILGLNKIVR Gag 266-275 p24(134-143) 1585..1614 A, B, C human A*11, A11, A3, A33
ILGLNKIV Gag 267-274 p24(135-142) 1588..1611 B, C, CRF01_AE human A*0201, A2, A3, B27
ILGLNKIVR Gag 267-275 p24(135-143) 1588..1614 B human A11, A3
ILGLNKIVRMY Gag 267-277 p24(135-145) 1588..1620 B human B27, B7, B7 supertype
LGLNKIVRMY Gag 268-277 p24(136-145) 1591..1620 B human B62
LGLNKIVRMYS Gag 268-278 p24(136-146) 1591..1623 C human B62
GLNKIVRMY Gag 269-277 p24(137-145) 1594..1620 A, B human B*15, B*1501, B15, B27, B62
GLNKVRMY Gag 269-277 p24(137-145) 1594..1620 B, CRF01_AE human B62
VRMYSPVSI Gag 274-282 p24(142-150) 1609..1635 B, C, F human Cw*1801, Cw18
RMYSPTSI Gag 275-282 p24(143-150) 1612..1635 B, F human B*52, B*5201, B52
RMYSPTSIL Gag 275-283 p24(143-151) 1612..1638 B, CRF01_AE, CRF02_AG human A2
RMYSPVSIL Gag 275-283 p24(143-151) 1612..1638 A, B human  
RMYSPVIL Gag 275-283 p24(143-151) 1612..1638 A1 human  
MYSPTSIL Gag 276-283 p24(144-151) 1615..1638 B human A24
MYSPTSILDI Gag 276-285 p24(144-153) 1615..1644 B mouse H-2d
YSPVSILDI Gag 277-285 p24(145-153) 1618..1644 CRF01_AE human, macaque Cw*0102
YSPTSILDI Gag 277-285 p24(145-153) 1618..1644 B human Cw12
SILDIRQGPK Gag 281-290 p24(149-158) 1630..1659 B human A11
ILDIRQGPK Gag 282-290 p24(150-158) 1633..1659 A1 human  
DIRQGPKEPFR Gag 284-294 p24(152-162) 1639..1671 B human B27
PKEPFRDYV Gag 289-297 p24(157-165) 1654..1680 A1 human  
EPFRDYVDRF Gag 291-300 p24(159-168) 1660..1689 B, C, D human, mouse A*0201, A2, H-2d, H-2Ld
EPFRDYVDRFF Gag 291-301 p24(159-169) 1660..1692 A, C, D human B81
PFRDYVDRF Gag 292-300 p24(160-168) 1663..1689 D human  
PFRDYVDRFF Gag 292-301 p24(160-169) 1663..1692 C human  
FRDYVDRFY Gag 293-301 p24(161-169) 1666..1692 B human A*0101
FRDYVDRFF Gag 293-301 p24(161-169) 1666..1692 C human Cw*1801, Cw18
FRDYVDRFYK Gag 293-302 p24(161-170) 1666..1695 B, D human, macaque B*1801, B18, B27
FRDYVDRFFK Gag 293-302 p24(161-170) 1666..1695   human  
FRDYVDRFFKAL Gag 293-304 p24(161-172) 1666..1701 A human A3
FRDYVDRFYKTLRA Gag 293-306 p24(161-174) 1666..1707 B human  
RDYVDRFFKTL Gag 294-304 p24(162-172) 1669..1701 A human A*2402, A24
RDYVDRFYKTL Gag 294-304 p24(162-172) 1669..1701 B, D human, macaque A*26, A24, A26, B*4402, B*70, B18, B44, B70
DYVDRFYKT Gag 295-303 p24(163-171) 1672..1698 B human A*2402
DYVDRFFKT Gag 295-303 p24(163-171) 1672..1698 A, A1 human  
DYVDRFYKTL Gag 295-304 p24(163-172) 1672..1701   human A24
DYVDRFFKTL Gag 295-304 p24(163-172) 1672..1701   human A24
SYVDRFYKSL Gag 295-304 p24(163-172) 1672..1701   human A24
YVDRFYKTL Gag 296-304 p24(164-172) 1675..1701 B human A*0207, A2, B70
YVDRFFKTL Gag 296-304 p24(164-172) 1675..1701 A, B, C, D human A*2601, A26, B*1503, B*1510, B15, B70, Cw*03, Cw*0303, Cw*0304
YVDRFFKAL Gag 296-304 p24(164-172) 1675..1701 A, CRF01_AE human B15, Cw*0303
YVDRFFKRL Gag 296-304 p24(164-172) 1675..1701 C human B*1510, B70
QATQDVKNW Gag 296-304 p24(164-172) 1675..1701 C human B*5301, B*5702, B*5703, B*5801, B57
YVDRFFKTL ? Gag 296-304 p24(164-172) 1675..1701   human Cw*0304
YVDRFYKTLRAEQA Gag 296-309 p24(164-177) 1675..1716 B mouse  
VDRFYKTLRAEQAS Gag 297-310 p24(165-178) 1678..1719 B human  
VDRFYKLTRAEQAS Gag 297-310 p24(165-178) 1678..1719 B human  
DRFYKTLRA Gag 298-306 p24(166-174) 1681..1707 B, D human B*1402, B14, B27
DRFFKTLRA Gag 298-306 p24(166-174) 1681..1707 A, A1, C human B*1401, B*1402, B*1403, B14, Cw8
DRFWKTLRA Gag 298-306 p24(166-174) 1681..1707   human B14
DRFYKLTRA Gag 298-306 p24(166-174) 1681..1707 B human B14
DRFYKTRAE Gag 298-307 p24(166-175) 1681..1710   human B14
DRFYKTLRAE Gag 298-307 p24(166-175) 1681..1710   human B14
DRFYKTLRAEQ Gag 298-308 p24(166-176) 1681..1713 A, B human B*1402, B14
FYKTLRAEQ Gag 300-308 p24(168-176) 1687..1713   human Cw*0401
FKTLRAEQA Gag 301-309 p24(169-177) 1690..1716 A1 human  
TLRAEQATQD Gag 303-312 p24(171-180) 1696..1725 C human Cw*0304
RAEQASQEV Gag 305-313 p24(173-181) 1702..1728 B human B*5101, Cw*0802, Cw8
RAEQATQEV Gag 305-313 p24(173-181) 1702..1728 A human  
RAEQASQEVK Gag 305-314 p24(173-182) 1702..1731 B human A11
RAEQATQDVKN Gag 305-315 p24(173-183) 1702..1734 C human  
AEQASQDVKNW Gag 306-316 p24(174-184) 1705..1737 B, C, D human B*4402, B44, B57, Cw*04
AEQASQEVKNW Gag 306-316 p24(174-184) 1705..1737 B human B44
AEQASADVKNW Gag 306-316 p24(174-184) 1705..1737 B human B44
AEQATQDVKNW Gag 306-316 p24(174-184) 1705..1737 C human B*4403
AEQASQEVKNWM Gag 306-317 p24(174-185) 1705..1740   human Cw5
AEQASQEVKNWMT Gag 306-318 p24(174-186) 1705..1743   human B44
QASQEVKNW Gag 307-317 p24(175-185) 1708..1740 A1, B, D human B*5301, B*5701, B*5801, B53, B57, B58, Cw4
EQASQEVKNWMT Gag 307-318 p24(175-186) 1708..1743   human B44
QATQEVKNW Gag 308-316 p24(176-184) 1711..1737 A, B, CRF02_AG human B53
QATQEVKNM Gag 308-316 p24(176-184) 1711..1737 A human B53
QASGEVKNW Gag 308-316 p24(176-184) 1711..1737   human Cw4
QATQEVKGW Gag 308-316 p24(176-184) 1711..1737 B, CRF02_AG human  
QASKEVKNWV Gag 308-317 p24(176-185) 1711..1740   human B57
QTDPAVKNWM Gag 308-317 p24(176-185) 1711..1740   human  
ATQEVKNWM Gag 309-317 p24(177-185) 1714..1740   human B53
ASQEVKNWM Gag 309-317 p24(177-185) 1714..1740   human B53
AAVKNWMTQTL Gag 311-321 p24(179-189) 1720..1752   mouse H-2Db
EVKNWMTETL Gag 312-321 p24(180-189) 1723..1752   human B53
EVKNWMTETLL Gag 312-322 p24(180-190) 1723..1755 B human  
VKNWMTETL Gag 313-321 p24(181-189) 1726..1752 B human B*4801
VKNWMTETLL Gag 313-322 p24(181-190) 1726..1755 B human B8
VKNWMTETLLV Gag 313-323 p24(181-191) 1726..1758 B human  
ETLLVQNAN Gag 319-327 p24(187-195) 1744..1770 A1 human  
LVQNANPDC Gag 322-330 p24(190-198) 1753..1779 A1 human  
LVQNSNPDCK Gag 322-331 p24(190-199) 1753..1782 B human A11
VQNSNPDCK Gag 323-331 p24(191-199) 1756..1782 B human A11
VQNANPDCK Gag 323-331 p24(191-199) 1756..1782 B human A3
NANPDSKTI Gag 325-333 p24(193-201) 1762..1788   human B51
NANPDCKTI? Gag 325-333 p24(193-201) 1762..1788   human B51
NANPDCKTI Gag 325-333 p24(193-201) 1762..1788 A, B human B*51, B*5101, B51, B8
NSNPDCKTIL Gag 325-334 p24(193-202) 1762..1791 B human B*51
NANPDCKTILRAL Gag 325-337 p24(193-205) 1762..1800 C human B*3910
ANPDCKTIL Gag 326-334 p24(194-202) 1765..1791 B, C, CRF01_AE human B7
NPDCKTIL Gag 327-334 p24(195-202) 1768..1791 B, C human B*0801, B35, B8
NPDCKSILR Gag 327-335 p24(195-203) 1768..1794 A1 human  
NPDCKTILRAL Gag 327-337 p24(195-205) 1768..1800 C human B*3910
PDCKTILKA Gag 328-336 p24(196-204) 1771..1797 B human  
DCKTILKAL Gag 329-337 p24(197-205) 1774..1800 A1, B human, humanized rabbit A*0801, B*0801, B8
DCKTILRAL Gag 329-337 p24(197-205) 1774..1800 C human B*0801
DCKSILRAL Gag 329-337 p24(197-205) 1774..1800 A, A1 human  
KALGPAATL Gag 335-343 p24(203-211) 1792..1818 B human B15, Cw3
RALGPGATL Gag 335-343 p24(203-211) 1792..1818 A1, B, C, D human Cw8
RALGPGATM Gag 335-343 p24(203-211) 1792..1818 C human  
ALGPGASLEEM Gag 336-346 p24(204-214) 1795..1827 C human  
GPGATLEEM Gag 338-346 p24(206-214) 1801..1827 A, C, D human  
GATLEEMMT Gag 340-348 p24(208-216) 1807..1833 A1 human  
ATLEEMMTA Gag 341-349 p24(209-217) 1810..1836 A, B, CRF01_AE, D human, transgenic mouse A*0206, A2
LEEMMTACQ Gag 343-351 p24(211-219) 1816..1842 A1 human  
EEMMTACQG Gag 344-352 p24(212-220) 1819..1845 A1 human  
EEMMTACQGVG Gag 344-354 p24(212-222) 1819..1851 C human  
EMMTACQGV Gag 345-353 p24(213-221) 1822..1848   human, transgenic mouse A*0201, A2
MMTACQGVG Gag 346-354 p24(214-222) 1825..1851 A1 human  
MTACQGVGG Gag 347-355 p24(215-223) 1828..1854 A1 human  
ACQGVGGPGHK Gag 349-359 p24(217-227) 1834..1866 B, CRF01_AE human A*0201, A*11, A*1101, A*1103, A11
ACQGVGGPSHK Gag 349-359 p24(217-227) 1834..1866 B human  
CQGVGGPGHK Gag 350-359 p24(218-227) 1837..1866 B human A11
QGVGGPGHKARVL Gag 351-363 p24(219-231) 1840..1878 B, C human  
GVGGPGHK Gag 352-359 p24(220-227) 1843..1866   human A11
GVGGPSHK Gag 352-359 p24(220-227) 1843..1866 B human  
GVGGPGHKAR Gag 352-361 p24(220-229) 1843..1872 B, F human A11
VGGPGHKARVL Gag 353-363 p24(221-231) 1846..1878 B, C, CRF01_AE human B7
GGPGHKARV Gag 354-362 p24(222-230) 1849..1875 A1 human  
GPGHKARVL Gag 355-363 p24(223-231) 1852..1878 B, C, D, F human, transgenic mouse A*0201, B*0702, B35, B42, B5, B7
GPSHKARVL Gag 355-363 p24(223-231) 1852..1878 A, B, C, CRF01_AE, D human B*0702, B*4201, B42, B7, B81
RQANFLGKI Gag 355-363 p24(223-231) 1852..1878 B, C human B*1302, B*4801, B13
GPSHKARVLA Gag 355-364 p24(223)-p2p7p1p6(1) 1852..1881 C human B*0702
GPGHKARVLA Gag 355-364 p24(223)-p2p7p1p6(1) 1852..1881 multiple human B7
RVLAEAMSQV Gag 361-370 p24(229)-p2p7p1p6(7) 1870..1899 B human A2
VLAEAMSQV Gag 362-370 p24(230)-p2p7p1p6(7) 1873..1899 A, B, C, D human, mouse, transgenic mouse A*0201, A2, A2 supertype
VLAEAMSQA Gag 362-370 p24(230)-p2p7p1p6(7) 1873..1899   human A2
VLAEAMSQVT Gag 362-371 p24(230)-p2p7p1p6(8) 1873..1902 B human A2
AEAMSQVTNS Gag 364-373 p2p7p1p6(1-10) 1879..1908   human B*4002, B*4501
AEAMSQANS Gag 364-373 p2p7p1p6(1-10) 1879..1908 C human B*4501
SQVTNSATI Gag 368-376 p2p7p1p6(5-13) 1891..1917 B human A2
SQVTNPANI Gag 368-376 p2p7p1p6(5-13) 1891..1917   mouse H-2Db
QVTNSATIM Gag 369-377 p2p7p1p6(6-14) 1894..1920 B human  
VTNSATIMM Gag 370-378 p2p7p1p6(7-15) 1897..1923 B human  
TNSANIMMQR Gag 371-380 p2p7p1p6(8-17) 1900..1929 B human  
NSATIMMQR Gag 372-380 p2p7p1p6(9-17) 1903..1929 B human  
MMQRGNFRN Gag 377-385 p2p7p1p6(14-22) 1918..1944 B human  
QRGNFRNQR Gag 379-387 p2p7p1p6(16-24) 1924..1950 B human  
NFRGPKRIKCFNCG Gag 382-396 p2p7p1p6(19-33) 1933..1977 A human  
KGPKRIIKC Gag 384-392 p2p7p1p6(21-29) 1939..1965 C mouse H-2d
KGPRRIVKC Gag 384-392 p2p7p1p6(21-29) 1939..1965 C mouse H-2d
RNQRKTVKC Gag 384-392 p2p7p1p6(21-29) 1939..1965 B human  
GPKRIVKCF Gag 385-393 p2p7p1p6(22-30) 1942..1968 C human B*4201
SKRIVKCFNCG Gag 386-396 p2p7p1p6(23-33) 1945..1977 C human  
KTVKCFNCGR Gag 388-397 p2p7p1p6(25-34) 1951..1980 B human A11
CGKEGHIAR Gag 395-403 p2p7p1p6(32-40) 1972..1998   human A*3101
IARNCRAPR Gag 401-409 p2p7p1p6(38-46) 1990..2016 C human A*3001
LARNCRAPRK Gag 401-410 p2p7p1p6(38-47) 1990..2019 multiple human A*3101, A3
IAKNCRAPRKK Gag 401-411 p2p7p1p6(38-48) 1990..2022 C human  
CRAPRKKGC Gag 405-413 p2p7p1p6(42-50) 2002..2028 B human B14
CRAPRKKGCW Gag 405-414 p2p7p1p6(42-51) 2002..2031 B human B57
KAPRKKGCW Gag 406-414 p2p7p1p6(43-51) 2005..2031 A1 human  
RAPRKKGCW Gag 406-414 p2p7p1p6(43-51) 2005..2031 C human  
KAPRKKGCWK Gag 406-415 p2p7p1p6(43-52) 2005..2034 B human A11
KCGKEGHQMK Gag 415-424 p2p7p1p6(52-61) 2032..2061 B human A11
HQMKDCNERQAN Gag 421-432 p2p7p1p6(58-69) 2050..2085 B, G human A2
DCTERQANFLG Gag 425-435 p2p7p1p6(62-72) 2062..2094 B, C human  
CTERQANFL Gag 426-434 p2p7p1p6(63-71) 2065..2091 B human B61
TERQANFL Gag 427-434 p2p7p1p6(64-71) 2068..2091 B human B*4002, B40
ERQANFLGKIW Gag 428-438 p2p7p1p6(65-75) 2071..2103 C human  
FLGKIWPS Gag 433-440 p2p7p1p6(70-77) 2086..2109 A, B, CRF02_AG human, transgenic mouse A*0201, A2
FLGKIWPSHK Gag 433-442 p2p7p1p6(70-79) 2086..2115 A1, B, C, CRF01_AE human A*0201, A*0205, A2
FLGKIWPSYK Gag 433-442 p2p7p1p6(70-79) 2086..2115 A1, B, C, D goat, human A*0201, A2
KIWPSYKGR Gag 436-444 p2p7p1p6(73-81) 2095..2121   human A*3101
PPSGKGGNY Gag 438-448 p2p7p1p6(75-85) 2101..2133 HIV-2 human B35
GNFLQSRPTAPPF Gag 446-460 p2p7p1p6(83-97) 2125..2169   human A2
FLQSRPEPTA Gag 448-457 p2p7p1p6(85-94) 2131..2160 B human A2
RPEPTAPPA Gag 452-460 p2p7p1p6(89-97) 2143..2169 CRF01_AE human  
EPTAPPEESF Gag 454-463 p2p7p1p6(91-100) 2149..2178 D human B35, B58
EPTAPPAESFRF Gag 454-465 p2p7p1p6(91-102) 2149..2184 C human B*5801
AESFRFEET Gag 460-470 p2p7p1p6(97-107) 2167..2199 CRF01_AE human  
TPSQKQEPI Gag 471-479 p2p7p1p6(108-116) 2200..2226 B, D human B35, B53
SQKQEQIDK Gag 473-481 p2p7p1p6(110-118) 2206..2232 B human A11
QEPIDKELY Gag 476-484 p2p7p1p6(113-121) 2215..2241 D human B44
EPKDREPL Gag 477-486 p2p7p1p6(114-123) 2218..2247 C human B*0801
EPIDKELYPL Gag 477-486 p2p7p1p6(114-123) 2218..2247 B, D human B35, B53
EPIDKELYPLA Gag 477-487 p2p7p1p6(114-124) 2218..2250 B human  
KELYPLASL Gag 481-489 p2p7p1p6(118-126) 2230..2256 B human A*0201, B40
KELYPLTSL Gag 481-489 p2p7p1p6(118-126) 2230..2256 B human B*4001, B40, B60
LYPLASLRSL Gag 483-492 p2p7p1p6(120-129) 2236..2265 D human A24
YPLTSLRSL Gag 484-492 p2p7p1p6(121-129) 2239..2265 B human B*3501
YPLASLRSL Gag 484-492 p2p7p1p6(121-129) 2239..2265 B, D human B53
YPLASLRSLF Gag 484-493 p2p7p1p6(121-130) 2239..2268 B, D human, mouse, transgenic mouse B*0702, B35, B7, B7 supertype
YPLTSLRSLF Gag 484-493 p2p7p1p6(121-130) 2239..2268 B human B7
PLTSLKSLFGS Gag 485-495 p2p7p1p6(122-132) 2242..2274 C human  
LASLRSLF Gag 486-493 p2p7p1p6(123-130) 2245..2268 D human B58
NLAFPQGEAR Pol 5-14 Gag/Pol-TF(5-14) 2097..2126 C human A*7401
FPQGKAREF Pol 8-16 Gag/Pol-TF(8-16) 2106..2132 A1, B, C human B35
TRANSPTRR Pol 21-29 Gag/Pol-TF(21-29) 2145..2171 B human B27
NSPTRREL Pol 24-31 Gag/Pol-TF(24-31) 2154..2177 B human Cw*0102
PTRRELQVW Pol 26-34 Gag/Pol-TF(26-34) 2160..2186 B human B57
PTSRELQVW Pol 26-34 Gag/Pol-TF(26-34) 2160..2186 A1 human  
AGAERQGTL Pol 44-52 Gag/Pol-TF(44-52) 2214..2240 C mouse H-2d
FSFPQITLW Pol 54-62 Gag/Pol-TF(54)-Protease(6) 2244..2270 B human B57
SFPQITLWQRPLVT Pol 55-68 Gag/Pol-TF(55)-Protease(12) 2247..2288 B human B51, B52
ITLWQRPLV Pol 59-67 Protease(3-11) 2259..2285 A, B, C, D human, transgenic mouse A*6802, A*7401, A19, A2, A28, A28 supertype, A68, A74
QRPLVTIKI Pol 63-71 Protease(7-15) 2271..2297   human A*0101
QRPLVTVKIG Pol 63-72 Protease(7-16) 2271..2300 B human B51
VTIKIGGQLK Pol 67-76 Protease(11-20) 2283..2312 B, C, D human, mouse A*0301, A3, A3 supertype
VTILIGGQLK Pol 67-76 Protease(11-20) 2283..2312   human A3 supertype
TIKIGGQLK Pol 68-76 Protease(12-20) 2286..2312   human A3 supertype
LLDTGADDTV Pol 79-88 Protease(23-32) 2319..2348   transgenic mouse A*0201
LLDTGADDTVL Pol 79-89 Protease(23-33) 2319..2351 B human A2
DTVLEEMNL Pol 86-94 Protease(30-38) 2340..2366 A, B, CRF02_AG, CRF06_cpx, CRF09_cpx human A*6802, A28, A68
DTVLEDINL Pol 86-94 Protease(30-38) 2340..2366 A human A*6802
DTVLEEWNL Pol 86-94 Protease(30-38) 2340..2366 D human A*6802
DTVLEDMNL Pol 86-94 Protease(30-38) 2340..2366 B human  
EEMNLPGRW Pol 90-98 Protease(34-42) 2352..2378 B, C, D human B*4402, B*4403, B18, B40, B44
EEINLPGKW Pol 90-98 Protease(34-42) 2352..2378 C human B*4403, B44
EDMNLPGRW Pol 90-98 Protease(34-42) 2352..2378 B human  
LPGRWKPKMI Pol 94-103 Protease(38-47) 2364..2393 B human Cw3
WKPKMIGGI Pol 98-106 Protease(42-50) 2376..2402 B human Cw3
KMIGGIGGF Pol 101-109 Protease(45-53) 2385..2411 B human B*1501, B62
KMIGGIGGFI Pol 101-110 Protease(45-54) 2385..2414 B human, humanized mouse A*0201, A2, A2 supertype, B62
KVRQYDQIL Pol 111-119 Protease(55-63) 2415..2441 B human A2, Cw6
VRQYDQIPIEI Pol 112-122 Protease(56-66) 2418..2450 B human B13
RQYDQIPIEI Pol 113-122 Protease(57-66) 2421..2450 B human B13
RQYDQILIEI Pol 113-122 Protease(57-66) 2421..2450 B human B13
QYDDAVYKL Pol 114-122 Protease(58-66) 2424..2450   human Cw*04
QYDQIPIEI Pol 114-122 Protease(58-66) 2424..2450   human Cw*0401
ILIEICGHK Pol 118-126 Protease(62-70) 2436..2462 B human A3
IEICGHKAIG Pol 120-129 Protease(64-73) 2442..2471 B human B18, B40, B44
GKKAIGTVL Pol 124-132 Protease(68-76) 2454..2480 B, C human B*15, B*1503
KAIGTVLV Pol 126-133 Protease(70-77) 2460..2483 B, C human B57, B58, B63
VLVGPTPVNI Pol 131-140 Protease(75-84) 2475..2504 B human, humanized mouse, mouse, transgenic mouse A*0201
LVGPTPVNI Pol 131-140 Protease(75-84) 2475..2504 B, C human, mouse A*0201, A2, A2 supertype
LVGPTPANI Pol 132-140 Protease(76-84) 2478..2504   human, macaque A*0205
LVGPTPVNII Pol 132-141 Protease(76-85) 2478..2507 C human, mouse, transgenic mouse A*0205
VGPTPVNI Pol 133-140 Protease(77-84) 2481..2504 C mouse H-2D
VGPTPVNII Pol 133-141 Protease(77-85) 2481..2507 B mouse, transgenic mouse H-2Dd
IGPTPVNII Pol 133-141 Protease(77-85) 2481..2507 C mouse H-2d
VGPTPVNIIG Pol 133-142 Protease(77-86) 2481..2510   mouse, transgenic mouse  
PTPVNIIGRNL Pol 135-145 Protease(79-89) 2487..2519 B, C human B63
TPVNIIGRNML Pol 136-146 Protease(80-90) 2490..2522 C human B*8101, B81
TQIGCTLNF Pol 147-155 Protease(91-99) 2523..2549 B, C, CRF01_AE human B*1501, B*1503
TQICGTLNF Pol 147-155 Protease(91-99) 2523..2549 B human B62, Cw3
CTLNFPISPI Pol 151-160 Protease(95)-RT(5) 2535..2564   human A2 supertype
TLNFPISPI Pol 152-160 Protease(96)-RT(5) 2538..2564   human A2 supertype
FPISPIETV Pol 155-163 Protease(99)-RT(8) 2547..2573 B human B*5401
FPISPIETVP Pol 155-164 Protease(99)-RT(9) 2547..2576 B human B*5401
SPIETVPVKL Pol 158-167 RT(3-12) 2556..2585 B, C, multiple human A2, B*8101, B61, B7, B8
PIETVPVKL Pol 159-167 RT(4-12) 2559..2585 B human  
IETVPVKL Pol 160-167 RT(5-12) 2562..2585 A, B, CRF02_AG, CRF06_cpx, CRF09_cpx human B*4001, B*60, B40
IETVPVKLK Pol 160-168 RT(5-13) 2562..2588 B human  
PGMDGPKVKQ Pol 169-178 RT(14-23) 2589..2618 multiple human A11
GPKVKQWPL Pol 173-181 RT(18-26) 2601..2627 A, B, C, CRF02_AG, CRF06_cpx, CRF09_cpx, D human B*0801, B*4202, B7, B8
GPKVKQWPLT Pol 173-182 RT(18-27) 2601..2630 multiple human B7, B8
ALVEICTEM Pol 188-196 RT(33-41) 2646..2672 A, B, CRF02_AG, CRF06_cpx, CRF09_cpx human, humanized mouse, transgenic mouse A*0201, A2, A3
ALVEICTEL Pol 188-196 RT(33-41) 2646..2672 B human A*0201
ALVEICTEMEK Pol 188-198 RT(33-43) 2646..2678 B human A*0301, A3
ALVICTEMEK Pol 188-198 RT(33-43) 2646..2678   human A3
TEMEKEGKI Pol 194-202 RT(39-47) 2664..2690   mouse H-2Kk
TEMEAEGKI Pol 194-202 RT(39-47) 2664..2690   mouse  
EKEGKISKI Pol 197-205 RT(42-50) 2673..2699 B human B*5101, B51
EDEGKISKI Pol 197-205 RT(42-50) 2673..2699 B human B*5101
NTPVFAIKK Pol 212-220 RT(57-65) 2718..2744   human A*0301, A*6801, A3 supertype
NTPVFAIKKK Pol 212-221 RT(57-66) 2718..2747 B, multiple baboon, chimpanzee, goat, human A11, A68, B8
KLVDFRELNK Pol 228-237 RT(73-82) 2766..2795 B, multiple human A*0301, A3
GIPHPAGLK Pol 248-256 RT(93-101) 2826..2852 B, multiple human A*0301, A3
GIPHPAGLKK Pol 248-257 RT(93-102) 2826..2855 CRF01_AE human A11
SVTVLDVGD Pol 260-268 RT(105-113) 2862..2888 B human  
TVLDVGDAY Pol 262-270 RT(107-115) 2868..2894 B, C human B*3501, B*5701, B35
TVLDVGDIY Pol 262-270 RT(107-115) 2868..2894   human B35
VLDVGDAYFSV Pol 263-273 RT(108-118) 2871..2903 B human, transgenic mouse A*0201, A2
DAYFSVPL Pol 268-275 RT(113-120) 2886..2909   human A24, B*5101, B51
FSVPLDEDF Pol 271-279 RT(116-124) 2895..2921 C human B*5702, B*5703, B35
FSVPLDEGF Pol 271-279 RT(116-124) 2895..2921 C human B*5702, B*5703
SVPLDESFRK Pol 272-281 RT(117-126) 2898..2927 CRF01_AE human A11
VPLDEDFRKY Pol 273-282 RT(118-127) 2901..2930 B, C human B*3501, B35
VPLDKDFRKY Pol 273-282 RT(118-127) 2901..2930 A, B, CRF02_AG, CRF06_cpx, CRF09_cpx human B*3501, B35
VPLDEGFRKY Pol 273-282 RT(118-127) 2901..2930 C human B*3501
PLDEDFRKY Pol 274-282 RT(119-127) 2904..2930 B human  
PLDESFRKY Pol 274-282 RT(119-127) 2904..2930 CRF01_AE human  
KYTAFTIPSI Pol 281-290 RT(126-135) 2925..2954   human A2
YTAFTIPSI Pol 282-290 RT(127-135) 2928..2954 B, C human A*0205, A2, A2 supertype
YTAFTIPSV Pol 282-290 RT(127-135) 2928..2954   human A2
TAFTIPSI Pol 283-290 RT(128-135) 2931..2954 A, B, CRF02_AG, CRF06_cpx, CRF09_cpx human A*0201, A*0217, B*51, B*5101, B51
TAFTIPSV Pol 283-290 RT(128-135) 2931..2954 B human B*51
TAFTIPSIN Pol 283-291 RT(128-136) 2931..2957 B human  
NNETPGIRY Pol 291-299 RT(136-144) 2955..2981 C human B*1801
NNETPGVRY Pol 291-299 RT(136-144) 2955..2981 B human B*1801
NETPGIRYQ Pol 292-300 RT(137-145) 2958..2984 B human  
NETPGIRYQY Pol 292-301 RT(137-146) 2958..2987 B, C human B18
TPGIRYQYNVL Pol 294-304 RT(139-149) 2964..2996 C human B*4202
IRYQYNVL Pol 297-304 RT(142-149) 2973..2996 C human B*1401
LPQGWKGSPA Pol 304-313 RT(149-158) 2994..3023 B human B*5401
LPQGWKGSPAI Pol 304-314 RT(149-159) 2994..3026 C human B*3910
QGWKGSPAI Pol 306-314 RT(151-159) 3000..3026 B human B*5101
WKGSPAIFQSSMT Pol 308-320 RT(153-165) 3006..3044   human B7
GSPAIFQSS Pol 310-318 RT(155-163) 3012..3038 B human  
SPAIFQSSM Pol 311-319 RT(156-164) 3015..3041 A, A1, B, C, CRF01_AE, CRF02_AG, CRF06_cpx, CRF09_cpx, D human B*0702, B*3501, B*4202, B*8101, B35, B7
SPSIFQSSM Pol 311-319 RT(156-164) 3015..3041 A1, B human  
SPAIFQSSMT Pol 311-320 RT(156-165) 3015..3044 B, multiple human, transgenic mouse B35, B7
SPAIFQSSMTK Pol 311-321 RT(156-166) 3015..3047 B human A*11, A*6801, A3, A33, B35, B7
AIFQSSMTK Pol 313-321 RT(158-166) 3021..3047 A, B, C, CRF01_AE, CRF02_AG, D, multiple human, macaque, mouse A*0301, A*11, A*1101, A*6801, A11, A3, A3 supertype, A33, A68
SIFQSSMTK Pol 313-321 RT(158-166) 3021..3047 A1 human A11, A3, A33
AIFQCSMTK Pol 313-321 RT(158-166) 3021..3047 B human  
IFQSSMTKI Pol 314-322 RT(159-167) 3024..3050 A, B, C mouse H-2d, H-2Kd
SMTKILEPF Pol 318-326 RT(163-171) 3036..3062 B human  
MTKILEPFR Pol 319-327 RT(164-172) 3039..3065 B human A*0301, A3 supertype
FRKQNPDIV Pol 326-334 RT(171-179) 3060..3086 B human  
KQNPDIVIY Pol 328-336 RT(173-181) 3066..3092 B human A*3002, A30, B*1503, Cw*1202
AQNPEIVIY Pol 328-336 RT(173-181) 3066..3092 C human A*3002
AQNPEIVIYQY Pol 328-338 RT(173-183) 3066..3098 C human A*3002
KQNPDIVIYQY Pol 328-338 RT(173-183) 3066..3098 B human  
QNPDIVIYQ Pol 329-337 RT(174-182) 3069..3095 B human  
NPDIVIQYQ Pol 330-337 RT(175-182) 3072..3095   human A30
NPDVILIQY Pol 330-337 RT(175-182) 3072..3095 HIV-2 human B35
NPEIVIYQY Pol 330-338 RT(175-183) 3072..3098 C human B*3501, B18, B35
NPDIVIYQY Pol 330-338 RT(175-183) 3072..3098 A1, B, C human B*3501, B35
HPDIVIYQY Pol 330-338 RT(175-183) 3072..3098 A, B human, macaque B*3501, B35
NPDWIYQY Pol 330-338 RT(175-183) 3072..3098 A, CRF02_AG, CRF06_cpx, CRF09_cpx human B35
NPDIVIYQYM Pol 330-339 RT(175-184) 3072..3101 B human B51
VIYQYMDDL Pol 334-342 RT(179-187) 3084..3110 A, B, C, CRF01_AE, D human, humanized mouse, macaque, mouse, transgenic mouse A*0201, A2
VIYQYMMDL Pol 334-342 RT(179-187) 3084..3110 B human A*0202, A2
VIVQYMDDL Pol 334-342 RT(179-187) 3084..3110 B human A2
VIYQYNDDL Pol 334-342 RT(179-187) 3084..3110   human A2
VIYQMDDL Pol 334-342 RT(179-187) 3084..3110   human A2
VIYQYVDDLYV Pol 334-344 RT(179-189) 3084..3116 B human A*0201
VIYQYMDDLYV Pol 334-344 RT(179-189) 3084..3116 B human A*0201
IYQYMDDLYV Pol 335-344 RT(180-189) 3087..3116 B human A*0201
YQYMDDLYV Pol 336-344 RT(181-189) 3090..3116 B human A*0201, A2
YQYVDDLYV Pol 336-344 RT(181-189) 3090..3116 B human A*0201
DLYVGSDLE Pol 341-349 RT(186-194) 3105..3131 B human  
DLEIGQHRTK Pol 347-356 RT(192-201) 3123..3152   human A3
DLEIGQHRTKI Pol 347-357 RT(192-202) 3123..3155 B human A3
KIEELRQHL Pol 356-364 RT(201-209) 3150..3176   human A2
KIEELRQHLL Pol 356-365 RT(201-210) 3150..3179   human B58
IEELRQHLL Pol 357-365 RT(202-210) 3153..3179 A, B, CRF02_AG, CRF06_cpx, CRF09_cpx human B*4001, B*60, B40, B60, B61
EELRQHLLR Pol 358-366 RT(203-211) 3156..3182   human B44
EELRQHLLRW Pol 358-367 RT(203-212) 3156..3185 B human B44
EELREHLLKW Pol 358-367 RT(203-212) 3156..3185 C human B*4403
ELRQHLLRW Pol 359-367 RT(204-212) 3159..3185 B human A*2501
RAHLLSWGF Pol 361-369 RT(206-214) 3165..3191 A, B, C mouse H-2Kd
REHLLKWGF Pol 361-369 RT(206-214) 3165..3191 C human  
RQHLLRWGL Pol 361-369 RT(206-214) 3165..3191 B human  
LLRWGLTTPDKK Pol 364-375 RT(209-220) 3174..3209 B human, humanized mouse A*0201, A2
LRWGFCTPDKK Pol 365-375 RT(210-220) 3177..3209   human B57
LRWGFYTPDKK Pol 365-375 RT(210-220) 3177..3209 B human B57
FTTPDKKHQK Pol 369-378 RT(214-223) 3189..3218 multiple human A11, A68
TTPDKKHQKE Pol 370-379 RT(215-224) 3192..3221 multiple human A11
HQKEPPFLW Pol 376-384 RT(221-229) 3210..3236 CRF02_AG human  
ELHPDKWTV Pol 388-396 RT(233-241) 3246..3272 B, D human  
ELHPDRWTV Pol 388-396 RT(233-241) 3246..3272 B, C human  
TVQPIVLPE Pol 395-403 RT(240-248) 3267..3293 B human  
PIVLPEKDSW Pol 398-407 RT(243-252) 3276..3305 B human B*5701, B57
IVLPEKDSW Pol 399-407 RT(244-252) 3279..3305 A, A1, B, C, CRF02_AG, CRF06_cpx, CRF09_cpx human B*5701, B*58, B*5801, B57, B58
IVLPEKESW Pol 399-407 RT(244-252) 3279..3305 C human B*5801
IQLPEKDSW Pol 399-407 RT(244-252) 3279..3305 C human B*5801
IVPEKDSW Pol 400-407 RT(245-252) 3282..3305   human B57
KLVGKLNWA Pol 414-422 RT(259-267) 3324..3350 A, B, C, D human, mouse A*0201, A2, A2 supertype
LVGKLNWASQIY Pol 415-426 RT(260-271) 3327..3362 B human B*1501, B15, B62
KLNWASQIY Pol 418-426 RT(263-271) 3336..3362 B, C human A*3002, A30
SQIYPGIKVR Pol 423-432 RT(268-277) 3351..3380 C human A*7401
QIYAGIKVK Pol 424-432 RT(269-277) 3354..3380 B, CRF01_AE human A*1101, A11, A3
QIYPGIKVR Pol 424-432 RT(269-277) 3354..3380 B, C human A*0301, A*7401, A3
QIYPGIKVK Pol 424-432 RT(269-277) 3354..3380 B human A3
YPGIKVRQL Pol 426-434 RT(271-279) 3360..3386 B, C human B*4201, B*4202, B42
YPGIKVKQL Pol 426-434 RT(271-279) 3360..3386 A, CRF02_AG, CRF06_cpx, CRF09_cpx human B*4201
YPIGKVRQL Pol 426-434 RT(271-279) 3360..3386 C human B*4201, B*4202
PGIKVRQLC Pol 427-435 RT(272-280) 3363..3389 B human  
VIPLTEEAE Pol 447-455 RT(292-300) 3423..3449 B human  
IPLTEEAEL Pol 448-456 RT(293-301) 3426..3452 A, A1, B, C, CRF02_AG, CRF06_cpx, CRF09_cpx human B*0702, B*1501, B*3501, B*5101, B*5301, B35, B51, B7
VPLTREAEL Pol 448-456 RT(293-301) 3426..3452 B human B51
LTEEAELEL Pol 450-458 RT(295-303) 3432..3458 B human  
AENREILKE Pol 459-467 RT(304-312) 3459..3485 B human  
EILKEPVGHV Pol 463-472 RT(308-317) 3471..3500 B human A*0201
ILKEPVHGV Pol 464-472 RT(309-317) 3474..3500 A, B, C, CRF02_AG, D human, humanized mouse, macaque, mouse, transgenic mouse A*0201, A*0202, A*0205, A2, A2 supertype
ILRIPVHGV Pol 464-472 RT(309-317) 3474..3500 CRF01_AE human A2
ILKDPVHGV Pol 464-472 RT(309-317) 3474..3500 A human A2
ILKEPVHGVY Pol 464-473 RT(309-318) 3474..3503 A, B, D, multiple human A2, B*15, B*1501, B15, B62, Cw*0303, Cw*1202
IKLEPVHGVY Pol 464-473 RT(309-318) 3474..3503 B human B*15, B15, B62
LKEPVHGVY Pol 465-473 RT(310-318) 3477..3503 C human  
KEPVHGVYY Pol 466-474 RT(311-319) 3480..3506 A1, CRF01_AE human  
VYYDPSKDL Pol 472-480 RT(317-325) 3498..3524 B, CRF02_AG human A24
VYYDPSKDIA Pol 472-481 RT(317-326) 3498..3527 C mouse H-2Kd
VYYDPSKDLI Pol 472-481 RT(317-326) 3498..3527 A, B, C mouse H-2Kd
YYDPSKDLI Pol 473-481 RT(318-326) 3501..3527 C mouse H-2D
KQGQGQWTY Pol 486-494 RT(331-339) 3540..3566 B human  
GQGQWTYQI Pol 488-496 RT(333-341) 3546..3572 B human B13
TYQIYQEPF Pol 493-501 RT(338-346) 3561..3587 D human  
QIYQEPFKNLK Pol 495-505 RT(340-350) 3567..3599 CRF01_AE human A11
QIYQEPFKNLKTG Pol 495-507 RT(340-352) 3567..3605 B human A11
IYQEPFKNL Pol 496-504 RT(341-349) 3570..3596 C human A*2301, A*2402, A11
IYQEPFKNLK Pol 496-505 RT(341-350) 3570..3599 B, C human A*11, A*1101, A11
FKNLKTGKY Pol 501-509 RT(346-354) 3585..3611 B human  
RMRGAHTNDV Pol 511-520 RT(356-365) 3615..3644 B human A*3002, A30
RMRGAHTNDVK Pol 511-521 RT(356-366) 3615..3647 B human A*0301, A3
RTRGAHTNDVK Pol 511-521 RT(356-366) 3615..3647 B human A3
RRTTHTNDV Pol 512-520 RT(357-365) 3618..3644 C human A*3001
DVKQLTEVV Pol 519-527 RT(364-372) 3639..3665 A human A*6802, A28, B70
QLTEAVQKI Pol 522-530 RT(367-375) 3648..3674 B, C human  
QLTEAVHKI Pol 522-530 RT(367-375) 3648..3674 C human  
VQKITTESI Pol 527-535 RT(372-380) 3663..3689 B human  
KIATESIVIW Pol 529-538 RT(374-383) 3669..3698 B human B*15, B57
KITTESIVIW Pol 529-538 RT(374-383) 3669..3698 B human B*5701, B57
ITTESIVIW Pol 530-538 RT(375-383) 3672..3698 B human B*5701, B*5801, B57
IATESIVIW Pol 530-538 RT(375-383) 3672..3698 B, D human B57
IAMESIVIW Pol 530-538 RT(375-383) 3672..3698 B, C human B*5702, B*5703, B*58, B*5801, B57
IALESIVIW Pol 530-538 RT(375-383) 3672..3698 A1 human  
KLPIWKETW Pol 545-553 RT(390-398) 3717..3743 B human B57
PIQKETWETW Pol 547-556 RT(392-401) 3723..3752 B human A*3201, A32
PIQKETWEAW Pol 547-556 RT(392-401) 3723..3752 B human  
TWETWWTEYW Pol 552-561 RT(397-406) 3738..3767 B human B44
TWEAWWTEYW Pol 552-561 RT(397-406) 3738..3767 A1, B, C human B44, B49
WETWWMDYW Pol 553-561 RT(398-406) 3741..3767 A1 human  
WETWWTEYW Pol 553-561 RT(398-406) 3741..3767 B human  
QATWIPEWEF Pol 562-571 RT(407-416) 3768..3797 B, C human B*5702, B*5703, B57
FVNTPPLV Pol 571-578 RT(416-423) 3795..3818   human, transgenic mouse A2
FVNTPPLVK Pol 571-579 RT(416-424) 3795..3821 CRF01_AE human A*1101, A11
NTPPLVKLW Pol 573-581 RT(418-426) 3801..3827 B human  
TPPLVKLWYQL Pol 574-584 RT(419-429) 3804..3836 C human  
PLVKLWYQL Pol 576-584 RT(421-429) 3810..3836   human, transgenic mouse A*0201, A2
EPIVGAETF Pol 587-595 RT(432-440) 3843..3869 B human B*3501, B35, B51
EPIVGAETFY Pol 587-596 RT(432-441) 3843..3872 B human, mouse B*3501, B35, B51
EPIAGAETFY Pol 587-596 RT(432-441) 3843..3872 C human B*3501
PIVGAETFY Pol 588-596 RT(433-441) 3846..3872 B human  
IVGAETFYVDGAAS Pol 589-602 RT(434-447) 3849..3890 B human A*6802
IVGAETFYVDGAAN Pol 589-602 RT(434-447) 3849..3890 B human  
GAETFYVDGA Pol 591-600 RT(436-445) 3855..3884 B, C human A*6802, A68, B45
GVETFYVDGA Pol 591-600 RT(436-445) 3855..3884   human B45
AETFYVDGA Pol 592-600 RT(437-445) 3858..3884 A, A1, B, CRF02_AG human B*4501, B44
AETFYVDGAAN Pol 592-602 RT(437-447) 3858..3890 B human A28
ETFYVDGA Pol 593-600 RT(438-445) 3861..3884 C human A*6802
ETFYVDGAANR Pol 593-603 RT(438-448) 3861..3893 B, C human A26, A66
RETKLGKAGY Pol 603-612 RT(448-457) 3891..3920   human A29
ETKLGKAGY Pol 604-612 RT(449-457) 3894..3920 B human A*2601, A26
KLGKAGYVV Pol 606-614 RT(451-459) 3900..3926 A, B, CRF02_AG human, transgenic mouse A*0201, A2
KLGKAGYVT Pol 606-614 RT(451-459) 3900..3926   human A2
RGRQKVVPL Pol 616-624 RT(461-469) 3930..3956 CRF01_AE human  
SLTETTTNQK Pol 623-631 RT(468-476) 3951..3977 C human A*7401
LTDTTNQKT Pol 624-632 RT(469-477) 3954..3980 B, C, CRF01_AE human  
TELQAIQLAL Pol 632-641 RT(477-486) 3978..4007 C human B*1801
LQAIYLALQ Pol 634-642 RT(479-487) 3984..4010 B human  
LALQDSGLE Pol 639-647 RT(484-492) 3999..4025 B human  
ALQDSGLEV Pol 640-648 RT(485-493) 4002..4028 B human A*0201, A2
ALQDSGSEVN Pol 640-649 RT(485-494) 4002..4031 B transgenic mouse A2
SGLEVNIVT Pol 644-652 RT(489-497) 4014..4040 B human  
GLEVNIVTD Pol 645-653 RT(490-498) 4017..4043 B human  
SEVNIVTDSQY Pol 646-656 RT(491-501) 4020..4052 C human B*4403
EVNIVTDSQY Pol 647-656 RT(492-501) 4023..4052 B human A*2601
VNIVTDSQYA Pol 648-657 RT(493-502) 4026..4055 B human  
IVTDSQYAL Pol 650-658 RT(495-503) 4032..4058   human Cw*0802
VTDSQYALGI Pol 651-660 RT(496-505) 4035..4064 B human B*1402, B*1503, B14, B15, Cw8
QPDKSESELV Pol 664-673 RT(509-518) 4074..4103 multiple human B7
ELVNQIIEQL Pol 671-680 RT(516-525) 4095..4124   human A2
NQIIEQLIK Pol 674-682 RT(519-527) 4104..4130 B human  
QIIEQLIKK Pol 675-683 RT(520-528) 4107..4133 B, CRF01_AE, multiple human A*1101, A11, A3
IIEQLIKKE Pol 676-684 RT(521-529) 4110..4136 B human  
IKKEKVYLA Pol 681-689 RT(526-534) 4125..4151 B human  
KVYLAWVPA Pol 685-693 RT(530-538) 4137..4163 B human A*0301, A3
KVYLAWVPAHK Pol 685-695 RT(530-540) 4137..4169 B, D human, mouse A*0301, A3, A3 supertype
RVYLSWVPAHK Pol 685-695 RT(530-540) 4137..4169 C human A*0301
YLAWVPAHK Pol 687-695 RT(532-540) 4143..4169 B human, transgenic mouse A2, A3 supertype, B7
STGIRRVLFL Pol 708-717 RT(553)-Integrase(2) 4206..4235 B human  
LFLDGIDKA Pol 715-723 RT(560)-Integrase(8) 4227..4253   human B81
QEEHERYHSNW Pol 724-734 Integrase(9-19) 4254..4286 B human B*4402
QEEHEKYHSNW Pol 724-734 Integrase(9-19) 4254..4286 B, C human B*4402, B*4403
EEHEKYHSNW Pol 725-734 Integrase(10-19) 4257..4286 C human B*4403
EHEKYHSNW Pol 726-734 Integrase(11-19) 4260..4286 B human  
RAMASDFNL Pol 735-743 Integrase(20-28) 4287..4313   human A*0201, A2 supertype
MASDFNLPPV Pol 737-746 Integrase(22-31) 4293..4322   human A2 supertype
LPPVVAKEI Pol 743-751 Integrase(28-36) 4311..4337 B human B*0702, B*51, B*5101, B51
LPPIVAKEI Pol 743-751 Integrase(28-36) 4311..4337 B, C human B*0705, B*4201, B*51, B*5101, B51
EIVASCDKCQL Pol 750-760 Integrase(35-45) 4332..4364 C human B*4201
VASCDKCQL Pol 752-760 Integrase(37-45) 4338..4364 C human B*8101
QVDCSPGI Pol 768-775 Integrase(53-60) 4386..4409 B human  
QLDCTHLEGK Pol 777-786 Integrase(62-71) 4413..4442 multiple human A3
THLEGKIIL Pol 781-789 Integrase(66-74) 4425..4451 B, C human B*1510, B15
THLEGKVIL Pol 781-789 Integrase(66-74) 4425..4451 B, C human B*1510
HLEGKVILV Pol 782-790 Integrase(67-75) 4428..4454 B human  
HVASGYIEA Pol 793-801 Integrase(78-86) 4461..4487 B human B*5401
GYIEAEVI Pol 797-804 Integrase(82-89) 4473..4496 B human A*2402
YIEAEVIPA Pol 798-806 Integrase(83-91) 4476..4502 B human  
IEAEVIPAET Pol 799-808 Integrase(84-93) 4479..4508 B human B*4002
IPAETGQETA Pol 804-813 Integrase(89-98) 4494..4523 multiple human B56, B7
IPAETGQETAY Pol 804-814 Integrase(89-99) 4494..4526 B, C human B*3501
AETGQETAY Pol 806-814 Integrase(91-99) 4500..4526 A1, CRF01_AE human  
AETGQETAYY Pol 806-815 Integrase(91-100) 4500..4529 C human B*4403
ETGQETAY Pol 807-814 Integrase(92-99) 4503..4526 C human A*2601
ETGQETAYY Pol 807-815 Integrase(92-100) 4503..4529 CRF01_AE human  
ETGQETAYFLL Pol 807-817 Integrase(92-102) 4503..4535 B human B*4002
GQETAYFLL Pol 809-817 Integrase(94-102) 4509..4535 B human  
ETAYFILKL Pol 811-819 Integrase(96-104) 4515..4541 A human A*6802
ETAYYILKLA Pol 811-820 Integrase(96-105) 4515..4544 C human A*6802
ILKLAGRWPVK Pol 816-826 Integrase(101-111) 4530..4562 C human A*0301
IHTDNGSNF Pol 828-836 Integrase(113-121) 4566..4592 B human  
HTDNGSNF Pol 829-836 Integrase(114-121) 4569..4592 B human Cw5
SNFTGATVR Pol 834-842 Integrase(119-127) 4584..4610 B human  
STTVKAACW Pol 838-846 Integrase(123-131) 4596..4622   human B57
SAAVKAACW Pol 838-846 Integrase(123-131) 4596..4622 C human B*5801
GATVRAACW Pol 838-846 Integrase(123-131) 4596..4622 B human  
STTVKAACWW Pol 838-847 Integrase(123-132) 4596..4625 B human B*5701, B*5801, B57
SAAVKAACWW Pol 838-847 Integrase(123-132) 4596..4625 C human B*5801
AAVKAACWW Pol 839-847 Integrase(124-132) 4599..4625 CRF02_AG human  
KAACWWAGI Pol 842-850 Integrase(127-135) 4608..4634   human A2 supertype
IQQEFGIPY Pol 850-858 Integrase(135-143) 4632..4658 B, C human B*1503, B15
IQQEFGIPYNPQ Pol 850-861 Integrase(135-146) 4632..4667 C human B*1503
KQEFGIPY Pol 851-858 Integrase(136-143) 4635..4658 B human B*1503
GIPYNPQSQ Pol 855-863 Integrase(140-148) 4647..4673 B human  
IPYNPQSQGW Pol 856-865 Integrase(141-150) 4650..4679 B human B7
IPYNPQSQGVV Pol 856-866 Integrase(141-151) 4650..4682 A, B, C, D human, mouse B*0702, B7 supertype
ELKKIIGQVR Pol 872-881 Integrase(157-166) 4698..4727 B, C human A*3301, A33
QVRDQAEHL Pol 879-887 Integrase(164-172) 4719..4745 C human A*0205
VRDQAEHL Pol 880-887 Integrase(165-172) 4722..4745 C human Cw*1801, Cw18
EHLKTAVQM Pol 885-893 Integrase(170-178) 4737..4763 B human  
HLKTAVQMAV Pol 886-895 Integrase(171-180) 4740..4769 multiple human A2
KTAVQMAVF Pol 888-896 Integrase(173-181) 4746..4772 B, C human, macaque B*5701, B*5703, B*5801, B57
QMAVFIHNFK Pol 892-901 Integrase(177-186) 4758..4787 A, B, C, D human, mouse A*0301, A3, A3 supertype
MAVFIHNFK Pol 893-901 Integrase(178-186) 4761..4787   human A3 supertype
AVFIHNFKR Pol 894-902 Integrase(179-187) 4764..4790   human A*0301, A3 supertype
AVFIHNFKRK Pol 894-903 Integrase(179-188) 4764..4793 B, CRF01_AE, multiple human A*0301, A*11, A*1101, A11, A3, A68
FKRKGGIGGY Pol 900-909 Integrase(185-194) 4782..4811 A1, B, C human B*1503, B*2705, B15, B27
KRKGGIGGY Pol 901-909 Integrase(186-194) 4785..4811 B, C human B*2705, B27
GERIVDII Pol 912-919 Integrase(197-204) 4818..4841 B human B*4002
GERIVDIIA Pol 912-920 Integrase(197-205) 4818..4844 B human  
IIATDIQTK Pol 918-926 Integrase(203-211) 4836..4862 B human A11
TDIQTKEL Pol 921-928 Integrase(206-213) 4845..4868 B human B*4002
TKIQNFRVYY Pol 933-942 Integrase(218-227) 4881..4910 B, C human B*1503
KIQNFRYY Pol 934-941 Integrase(219-226) 4884..4907 C human A*3002
KIQNFRVYY Pol 934-942 Integrase(219-227) 4884..4910 A, B, C, CRF01_AE, CRF02_AG, D human A*01, A*30, A*3002, A1, A30
KIQNFRVYYR Pol 934-943 Integrase(219-228) 4884..4913 A, B, C, D human, mouse A3, A3 supertype
IQNFRVYYR Pol 935-943 Integrase(220-228) 4887..4913 B human  
WKGPAKLLW Pol 950-958 Integrase(235-243) 4932..4958 C human  
LLWKGEGAV Pol 956-964 Integrase(241-249) 4950..4976 B human, mouse, transgenic mouse A*0201, A2
LLWKGEGAW Pol 956-964 Integrase(241-249) 4950..4976   human A*0201, A2
LLWKGEGAVV Pol 956-965 Integrase(241-250) 4950..4979 B human A*0201
KVVPRRKAK Pol 973-981 Integrase(258-266) 5001..5027 A, B, C, CRF02_AG human A3
VVPRRKAKI Pol 974-982 Integrase(259-267) 5004..5030   macaque  
VPRRKVKII Pol 975-983 Integrase(260-268) 5007..5033 B, C human B*4201, B42
VPRRKAKII Pol 975-983 Integrase(260-268) 5007..5033   human B42
RKAKIIRDY Pol 978-986 Integrase(263-271) 5016..5042 B, C human B*1503, B15
RKAKIIKDY Pol 978-986 Integrase(263-271) 5016..5042 C human B*1503
KIIRDYGK Pol 981-988 Integrase(266-273) 5025..5048 B human  
KIIKDYGKQM Pol 981-990 Integrase(266-275) 5025..5054 C human B*4201
IIKDYGKQM Pol 982-990 Integrase(267-275) 5028..5054 C human B*4201
NRWQVMIVW Vif 3-11   5047..5073 B human B*2705, B27
RIRTWKSLVK Vif 17-26   5089..5118 B human A*0301, A3
SLVKHHMYV Vif 23-31   5107..5133 A human, transgenic mouse A*0201, A2
SLVKHHMYI Vif 23-31   5107..5133 B, CRF02_AG human A*0201, A2
HMYISKKAK Vif 28-36   5122..5148 B human A*0301, A3
ISKKAKGWF Vif 31-39   5131..5157 B human B*5701, B*5801, B57
VSKKAKGWI Vif 31-39   5131..5157 B human B57
ISGKAKGWF Vif 31-39   5131..5157 B human B57
SKRASGWFF Vif 32-40   5134..5160 C human B*1503
SKRASGWFY Vif 32-40   5134..5160 C human B*1503
SRKAKGWFY Vif 32-40   5134..5160 B human B27
SPHPRISSEV Vif 46-55   5176..5205   human, transgenic mouse B7
HPRISSEVHI Vif 48-57   5182..5211 B human, transgenic mouse B*0702, B7
HPRVSSEVHI Vif 48-57   5182..5211 B human B*0702, B7
HPKVSSEVHI Vif 48-57   5182..5211 C human B*4201
HPKISSEVHI Vif 48-57   5182..5211 B human B7
HPKVSSEVHIA Vif 48-58   5182..5214 C human B*4201
EVHIPLGEAR Vif 54-63   5200..5229 C human A*6801
IPLGDARLVI Vif 57-66   5209..5238   human, transgenic mouse B7
IPLGDAKLII Vif 57-66   5209..5238 B human B*51, B51
DAKLIITTY Vif 61-69   5221..5247 B human B*3501, B35
DAKLVITTY Vif 61-69   5221..5247   human  
ARLVITTYW Vif 62-70   5224..5250 B human B27
HTGERDWHL Vif 73-81   5257..5283 B human B35
DWHLGHGVSI Vif 78-87   5272..5301 C human  
WHLGHVSI Vif 79-87   5275..5301 B human B15
WHLGHGVSI Vif 79-87   5275..5301 C human B*1510
WHLGQGVSI Vif 79-87   5275..5301 B human B*38, B*3801
LGHGVSIEW Vif 81-89   5281..5307 C human B*5703
GLADQLIHL Vif 101-109   5341..5367 A, B, CRF02_AG human, transgenic mouse A*0201, A2
DLADQLIHLY Vif 101-110   5341..5370 multiple human A2
LADQLIHLHY Vif 102-111   5344..5373 B human B*1801, B18
AIRKAILGR Vif 119-127   5395..5421 B human A*3101
HIVSPRCEY Vif 127-135   5419..5445 B human A29
ALAALITPK Vif 149-157   5485..5511   human, transgenic mouse A2
TPKKIKPPL Vif 155-163   5503..5529   human, transgenic mouse B7
KIKPPLPSV Vif 158-166   5512..5538   human, transgenic mouse A2
KTKPPLPSVKK Vif 158-168   5512..5544 B human A*0301, A11, A3
KIKPPLPSVTK Vif 158-168   5512..5544 B human A3
RRKPPLPSIAK Vif 158-168   5512..5544 B human A3
RIKPPLPSVTK Vif 158-168   5512..5544 B human A3
KPPLPSVTKL Vif 160-169   5518..5547   human, transgenic mouse B7
KPPLPSVKKL Vif 160-169   5518..5547 multiple human B7
VTKLTEDRW Vif 166-174   5536..5562 B human B57
VRKLVEDRW Vif 166-174   5536..5562 C human B*5801
KLTEDRWNK Vif 168-176   5542..5568 multiple human A3
DQGPQREPY Vpr 7-15   5577..5603 B human  
REPHNEWTL Vpr 12-20   5592..5618 B human B*4002, B40
REPWDEWVV Vpr 12-20   5592..5618   human Cw8
REPYNEWTL Vpr 12-20   5592..5618 B human  
TLEILEELKN Vpr 19-28   5613..5642 B human A3?
EAVRHFPRI Vpr 29-37   5643..5669 B human B*51, B*5101, B51
AVRHFPRIW Vpr 30-38   5646..5672 B, C human B*5701, B*5801, B27, B57, B63
AVRHFPRPW Vpr 30-38   5646..5672 C human B*5801
AVRHRPRIW Vpr 30-38   5646..5672   human  
AVRHFRPIW Vpr 30-38   5646..5672 B human  
VRHFPRIWL Vpr 31-39   5649..5675 B, C human B*2705, B27
HFPRIWLHGLG Vpr 33-43   5655..5687 B human  
FPRPWLHGL Vpr 34-42   5658..5684 B, C human, transgenic mouse A2, B*0702, B*4201, B*4202, B*8101, B7
FPRIWLHGL Vpr 34-42   5658..5684 B human, transgenic mouse B*0702, B*8101, B7, B81
FPRWLHGL Vpr 34-42   5658..5684 C human B*0702, B*4201, B*8101
FPRIWLHSL Vpr 34-42   5658..5684 B human B*0702
FPRTWLHGL Vpr 34-42   5658..5684 B human B7
FPRPWLHSL Vpr 34-42   5658..5684 C human  
SLGQHIYET Vpr 41-49   5679..5705   human, transgenic mouse A2
IYETYGDTW Vpr 46-54   5694..5720 B human A*2501
ETYGDTWTGV Vpr 48-57   5700..5729 C human A*6802
ETYGDTWAGV Vpr 48-57   5700..5729 B human  
DTWAGVEAIIR Vpr 52-62   5712..5744 B human A*6801, A68
TWAGVEAIIRI Vpr 53-63   5715..5747 B human A*11
TWAVEAIIRI Vpr 53-63   5715..5747   human  
AIIRILQQL Vpr 59-67   5733..5759 B human A*0201, A2, A2 supertype
ALIRILQQL Vpr 59-67   5733..5759 B, C human A*0201, A2
IIRILQQLLFI Vpr 60-70   5736..5768 B human A2, B27
RILQQLLFI Vpr 62-70   5742..5768 A, B, C, D, M human, humanized mouse, mouse, transgenic mouse A*0201, A2, A2 supertype
RILQQLFI Vpr 62-70   5742..5768   human  
RIGCRHSRIGV Vpr 73-83   5775..5807 B human  
EPVDPRLEPW Tat 2-11   5834..5863 B human B*5301, B53
EPVDPNLEPW Tat 2-11   5834..5863 B, C human B*5301, B58
EPIDPNLEPW Tat 2-11   5834..5863 C human B*5801
WPVDPRLEPW Tat 2-11   5834..5863 B human  
PVDPRLEPW Tat 3-11   5837..5863 A1, B human A*2501, B57
KHPGSQPKTA Tat 12-21   5864..5893 B human  
QPKTACTNC Tat 17-25   5879..5905   mouse H-2d
QPKTACTTCY Tat 17-26   5879..5908 B human B35
QPKTPCNKCY Tat 17-26   5879..5908 C human  
PKTACTNCY Tat 18-26   5882..5908 B human  
TACNNCYCK Tat 20-28   5888..5914 multiple human A3
TACNKCHCK Tat 20-28   5888..5914 B human  
TACNNCYCKK Tat 20-29   5888..5917 multiple human A68
NCYCKKCCY Tat 24-32   5900..5926 B human A*2902
NCYCKRCCF Tat 24-32   5900..5926 B human A*2902
NCYCKKCCF Tat 24-32   5900..5926   human  
CCFHCQVC Tat 30-37   5918..5941 B human Cw*1203, Cw12
CLHCQVCFI Tat 31-39   5921..5947 B human A2
FHCQVCFMTK Tat 32-41   5924..5953 B human  
FHCQVCFITK Tat 32-41   5924..5953   human  
VCFTTKGLGI Tat 36-45   5936..5965 B human B*15
VCFMTKGLGI Tat 36-45   5936..5965 B human B*1501
VCFITKALGI Tat 36-45   5936..5965   human  
FQTKGLGISY Tat 38-47   5942..5971 C human B*1503, B15
FMTKGLGISY Tat 38-47   5942..5971 B human B*1501
FQKKGLGISY Tat 38-47   5942..5971 C human B*1503
FMKKGLGISY Tat 38-47   5942..5971 B human  
MTKGLGISY Tat 39-47   5945..5971 B human B*1501, B15
ITKALGISY Tat 39-47   5945..5971   human  
QTKGLGISY Tat 39-47   5945..5971 B, CRF01_AE human  
ITKGLGISYGR Tat 39-49   5945..5977 B human A*68, A*6801, A68
MKKGLGISYGR Tat 39-49   5945..5977 B human  
TKGLGISY Tat 40-47   5948..5971 B human B*1503
TKALGISYGR Tat 40-49   5948..5977 B human  
RKKRRQRRR Tat 49-57   5975..6001   mouse H-2d
PPQGSQTHQV Tat 58-67   6002..6031   human, transgenic mouse B7
APQGHPNNQVSI Tat 58-69   6002..6037 B human  
GPKESKKKVE Tat 83-92   8410..8439   human B58
EELLKTVRL Rev 10-18   5997..6023 B human B*4402, B*4403
KAVRRLIKFLY Rev 11-23   6000..6038 B human B*5701, B*5801, B57
LRAVRIIKI Rev 13-21   6006..6032 A, B human B*5701, B*5703
KTVRLIKFLY Rev 14-23   6009..6038 B, C human B*3501, B57, B58, B63
QAVRIIKILY Rev 14-23   6009..6038 C human B*3501, B*5703
KTGRLIKLLY Rev 14-23   6009..6038 B human B57
KAVRLIKFLY Rev 14-23   6009..6038 B human B*5701, B*5801, B57, B63
RTVRLIKLLY Rev 14-23   6009..6038 B human B57
KTVRLIKRLY Rev 14-23   6009..6038   human B*5701
KAVRIKLFLY Rev 14-23   6009..6038   human B*5701, B*5801
AVRIIKIM Rev 15-22   6012..6035 C human  
AVRIIKIL Rev 15-22   6012..6035 C human  
TVRLIKFLY Rev 15-23   6012..6038 B human A3
KILYQSNPY Rev 20-28   6027..6045, 8379..8386 multiple human A3
GTRQARKNR Rev 33-41   8399..8425 C human A*3001
ARRNRRRRW Rev 37-45   8411..8437 B human B27
ARRNRRRW Rev 37-45   8411..8437 B human B*2705
RRRWRERQRQ Rev 42-51   8426..8455 B human B27
QRQRQIQSL Rev 47-55   8441..8467 B human  
RQIHSISER Rev 50-58   8450..8476 C human A*7401
KLDKWEKIR Rev 50-58   8450..8476 C human A*7401
QIRTYSGWI Rev 51-59   8453..8479 B human A2
QIRSISERIL Rev 51-60   8453..8482 B human A*3101
QIRSLSGWIL Rev 51-60   8453..8482 B human  
IHSISERIL Rev 52-60   8456..8482 C human B*1510
ISERILSTY Rev 55-63   8465..8491 B human A*0101, A1
ISTERILSTY Rev 55-63   8465..8491   human A1
ISERILSTYL Rev 55-64   8465..8494 B human A1
SEWILSTHL Rev 56-64   8468..8494 B human  
ERILSTYLGR Rev 57-66   8471..8500 B human A*0301, A3
RILSTYLGR Rev 58-66   8474..8500 B human A*0301
YLGGSEEPV Rev 63-71   8489..8515 B human A2
RSAEPVPL Rev 66-73   8498..8521   transgenic mouse A2
RPAEPVPLQL Rev 66-75   8498..8527 A, B, C, D, F, G human B*0702, B*4202, B7
RSAEPVPLQL Rev 66-75   8498..8527 B human  
RPAELVLQL Rev 66-75   8498..8527 B human  
SAEPVPLQL Rev 67-75   8501..8527 B human B14, Cw*0501, Cw5, Cw8
PVPFQLPPL Rev 70-78   8510..8536 B human A2
VPLQLPPL Rev 71-78   8513..8536 A, B, C, D human, mouse B*0702, B*5101, B7, B7 supertype
LQLPPLERL Rev 73-81   8519..8545 B human A2
LQLPPIERL Rev 73-81   8519..8545   human, transgenic mouse A2
LPLPPLDRL Rev 73-81   8519..8545   human, transgenic mouse B7
QLPPLERLT Rev 74-82   8522..8548 B human A2
LPPLDRLTL Rev 75-83   8525..8551   human, transgenic mouse B7
LPPLERLTL Rev 75-83   8525..8551 B human  
GMGSPQILV Rev 96-104   8588..8614   human, transgenic mouse A2
QILGEPPTV Rev 101-109   8603..8629 B human A2
QVLGESPTVL Rev 101-110   8603..8632 B human  
ILVESPAVL Rev 102-110   8606..8632 B human, transgenic mouse A2
ILGEPPTVL Rev 102-110   8606..8632 B human A2
PTVLESGTKE Rev 107-116   8621..8650 multiple human A68
QPIQIAIAAL Vpu 2-12   6065..6097   human, transgenic mouse B7
LVILAIVALV Vpu 4-13   6071..6100 multiple human B7
YRLGVGALI Vpu 5-13   6074..6100 C human Cw*1801, Cw18
LAIVALVVA Vpu 7-15   6080..6106 B human  
VVAAIIAIV Vpu 13-21   6098..6124   human A2
EYRKILRQR Vpu 29-37   6146..6172 B human A*3303, A33
ALVEMGHHV Vpu 67-75   6260..6286 A, B, CRF02_AG human, transgenic mouse A*0201, A2
ALVEMGHHA Vpu 67-75   6260..6286   human  
HAPWDVNDL Vpu 74-82   6281..6307 B human Cw*01, Cw*0102
VAPWNSDAL Vpu 74-82   6281..6307 B human  
RVKEKYQHL gp160 2-10 gp120(2-10) 6228..6254   human B*0801, B8
RKNYQHLWK gp160 4-12 gp120(4-12) 6234..6260 B human  
TQMNWPNLWK gp160 6-12 gp120(6-12) 6240..6260 CRF01_AE human A11
AAENLWVTVYY gp160 30-40 gp120(30-40) 6312..6344   human B44
AENLVWTVYY gp160 30-40 gp120(30-40) 6312..6344   human B44
AENLWVTVY gp160 31-39 gp120(31-39) 6315..6341 B human B*1801, B*4403, B44
AENLWVTVYY gp160 31-40 gp120(31-40) 6315..6344   human B*4402
DNLWVTVYY gp160 32-40 gp120(32-40) 6318..6344 B, CRF01_AE human B44
ENLWVTVYY gp160 32-40 gp120(32-40) 6318..6344 B human  
KLWVTVYYGV gp160 33-42 gp120(33-42) 6321..6350 B human A*0201, A2, A2.1
NLWVTVYYGV gp160 33-42 gp120(33-42) 6321..6350 multiple human A2
LWVTVYYGV gp160 34-42 gp120(34-42) 6324..6350 B human A*0201
VTVYYGVPV gp160 36-44 gp120(36-44) 6330..6356   human A2
VTVYYGVPVWK gp160 36-46 gp120(36-46) 6330..6362 A, B, C, D human, mouse A*0301, A*6801, A11, A3, A3 supertype
VTVYYGVPVWR gp160 36-46 gp120(36-46) 6330..6362 CRF01_AE human A11
VTVYYGVPVWKE gp160 36-47 gp120(36-47) 6330..6365 B human A*11, A*6801, A3, Cw*07
TVYYGVPVW gp160 37-45 gp120(37-45) 6333..6359 A, B, C, D human A*11, A3, B*5703, B*5801
TVYYGVPMW gp160 37-45 gp120(37-45) 6333..6359   human  
TVYYGIPVW gp160 37-45 gp120(37-45) 6333..6359   human  
TVYYGVPVWK gp160 37-46 gp120(37-46) 6333..6362 A, A1, B, C, D, multiple human, transgenic mouse A*0301, A*6801, A11, A2, A3, A3 supertype, B18
TVYYGVPVMK gp160 37-46 gp120(37-46) 6333..6362     A11, A3, A68
AVYYGVPVWK gp160 37-46 gp120(37-46) 6333..6362 A human A3
VYYGVPVWKEA gp160 38-48 gp120(38-48) 6336..6368   human Cw7
GVPVWKEATTT gp160 41-51 gp120(41-51) 6345..6377 B human B35
VPVWKEATT gp160 42-50 gp120(42-50) 6348..6374 B human  
VPVWKEATTT gp160 42-51 gp120(42-51) 6348..6377 B human B*5501, B55
VPVWKEATTTL gp160 42-52 gp120(42-52) 6348..6380 B human B*3501, B35
VPVWKKATTTL gp160 42-52 gp120(42-52) 6348..6380 C human B*3501
VPVWKEAKTTL gp160 42-52 gp120(42-52) 6348..6380 C human B*5301
VWKEATTTLF gp160 44-53 gp120(44-53) 6354..6383 B human B55
VWKDAETTLF gp160 44-53 gp120(44-53) 6354..6383   human  
VWKDAKTTLF gp160 44-53 gp120(44-53) 6354..6383   human  
VWKEAKTTLF gp160 44-53 gp120(44-53) 6354..6383   human  
TTLFCASDAK gp160 50-59 gp120(50-59) 6372..6401 A, B, C, D human, mouse A*0301, A3, A3 supertype
TLFCASDAK gp160 51-59 gp120(51-59) 6375..6401 D human A*0301, A3, A3 supertype
LFCASDAKAY gp160 52-61 gp120(52-61) 6378..6407 A, B human A*2402, A24
LFCASCAKAY gp160 52-61 gp120(52-61) 6378..6407 B human A24, B38
AKAYETEKHNVW gp160 58-69 gp120(58-69) 6396..6431 A, CRF02_AG human  
KAYEKEVHNVW gp160 59-69 gp120(59-69) 6399..6431 C human B*5703, B*5801
KAYETEVHNVW gp160 59-69 gp120(59-69) 6399..6431 C human B*5801, B58
KAHDPEVHNVW gp160 59-69 gp120(59-69) 6399..6431 B human B*5801
KAYDTEVHNVW gp160 59-69 gp120(59-69) 6399..6431 B human  
YETEVHNVW gp160 61-69 gp120(61-69) 6405..6431 B human B*1801
KEVHNVWAT gp160 63-71 gp120(63-71) 6411..6437 C, D human  
EVHNVWATHA gp160 64-73 gp120(64-73) 6414..6443 A, B, C, CRF01_AE, D human A*2603
NIWATHACV gp160 67-75 gp120(67-75) 6423..6449 A, B, CRF02_AG human, transgenic mouse A*0201, A2
NVWATHACV gp160 67-75 gp120(67-75) 6423..6449   human A2
ACVPTDPNP gp160 73-81 gp120(73-81) 6441..6467   human  
VPTDPNPPEV gp160 75-84 gp120(75-84) 6447..6476   human A2
VPADPNPQEMV gp160 75-85 gp120(75-85) 6447..6479 B, C mouse  
PADPNPQEM gp160 76-84 gp120(76-84) 6450..6476 C mouse H-2D
PTDPNPQEI gp160 76-84 gp120(76-84) 6450..6476 CRF01_AE, D human  
DPNPQEVVL gp160 78-86 gp120(78-86) 6456..6482 A1, B, C human B*3501, B35, B51
DPNPQEMVL gp160 78-86 gp120(78-86) 6456..6482 C human B*3501, B35
DPNPQEVAL gp160 78-86 gp120(78-86) 6456..6482   human B35
NVTENFNMW gp160 88-96 gp120(88-96) 6486..6512 B human A*2501
VTENFNMWK gp160 89-97 gp120(89-97) 6489..6515 CRF01_AE human  
VTEEFNMWK gp160 89-97 gp120(89-97) 6489..6515 A, B, C, D human  
VTENFNMWKN gp160 89-98 gp120(89-98) 6489..6518 multiple human A11, A68 supertype
QMHEDIISL gp160 103-111 gp120(103-111) 6531..6557 A, B, C, CRF01_AE human, transgenic mouse A*0201, A2
QMQEDIISL gp160 103-111 gp120(103-111) 6531..6557 B, D human  
MHEDIISLW gp160 104-112 gp120(104-112) 6534..6560 B human B*3801, B38
HEDIISLWDQSLK gp160 105-117 gp120(105-117) 6537..6575   chimpanzee, human A2
IISLWDQSL gp160 108-116 gp120(108-116) 6546..6572 B human A*0201, A2.1
ISLWDQSLK gp160 109-117 gp120(109-117) 6549..6575 CRF01_AE human A11
SLWDQSLKP gp160 110-118 gp120(110-118) 6552..6578 multiple human A3
KPCVKLIPL gp160 117-125 gp120(117-125) 6573..6599 C human B*4202
KPCVKLTPL gp160 117-125 gp120(117-125) 6573..6599 D human  
KPCVKLTPLC gp160 117-126 gp120(117-126) 6573..6602 multiple human, transgenic mouse B7
KLTPLCVTL gp160 121-129 gp120(121-129) 6585..6611 A, B, C, D human, humanized mouse, mouse, transgenic mouse A*0201, A2, A2 supertype
KLTPLCVSL gp160 121-129 gp120(121-129) 6585..6611   human, transgenic mouse A*0201, A2
KTLPLCVTL gp160 121-129 gp120(121-129) 6585..6611   human A2
TYNETYNEI gp160 146-154 gp120(146-154) 6660..6686 BC human  
KNCSFNMTT gp160 155-163 gp120(155-163) 6687..6713 A, B, C, D human  
NCSFNISTSI gp160 156-165 gp120(156-165) 6690..6719   human Cw8
IRDKVQKEY gp160 165-173 gp120(165-173) 6717..6743 B human B27
YSENSSEYY gp160 183-191 gp120(183-191) 6771..6797 B, C human A*01
YRLINCNTSV gp160 191-200 gp120(191-200) 6795..6824 CRF01_AE human A2
RLISCNTSV gp160 192-200 gp120(192-200) 6798..6824 B human A2
KLTSCNTSV gp160 192-200 gp120(192-200) 6798..6824   human A2
TLTSCNTSV gp160 192-200 gp120(192-200) 6798..6824   human A*0201, A2
ILRSCNTSV gp160 192-200 gp120(192-200) 6798..6824   human A2
SVITQACPK gp160 199-207 gp120(199-207) 6819..6845 B human A*11, A*1101, A11
CPKVSFEPI gp160 205-213 gp120(205-213) 6837..6863 A, B, D human, mouse B*0702, B7, B7 supertype
KMSFEPIPIH gp160 207-216 gp120(207-216) 6843..6872 A human A29
VSFEPIPIH gp160 208-216 gp120(208-216) 6846..6872 multiple human A3
VSFEPIPIHY gp160 208-217 gp120(208-217) 6846..6875 B human A29
VSFEPIPPHYCA gp160 208-219 gp120(208-219) 6846..6881 B human A2
SFDPIPIHY gp160 209-217 gp120(209-217) 6849..6875 C human A29
SFEPIPIHY gp160 209-217 gp120(209-217) 6849..6875 B, D human, mouse A*2902, A29
IPIHYCAPA gp160 213-221 gp120(213-221) 6861..6887 A, B, C, D human, mouse B*0702, B7, B7 supertype
HYCAPAGFAIL gp160 216-226 gp120(216-226) 6870..6902 B human  
YCAPAGFAIL gp160 217-226 gp120(217-226) 6873..6902 B human Cw*01, Cw*0102, Cw1
CAPAGFAIL gp160 218-226 gp120(218-226) 6876..6902 A, B, C, D human Cw1
CTPAGYAILKC gp160 218-228 gp120(218-228) 6876..6908 CRF01_AE human  
GPCKNVSTVQ gp160 237-246 gp120(237-246) 6933..6962   human B56
GTCKSVSTVQCTH gp160 237-249 gp120(237-249) 6933..6971 CRF02_AG human  
CKNVSTVQC gp160 239-247 gp120(239-247) 6939..6965 B human Cw*0802
CTNVSTVQC gp160 239-247 gp120(239-247) 6939..6965 B human Cw8
RPIVSTQLL gp160 252-260 gp120(252-260) 6978..7004   human B*3501, B35
RPVVSTQLL gp160 252-260 gp120(252-260) 6978..7004   human  
RPVVSTQLLL gp160 252-261 gp120(252-261) 6978..7007 multiple human, transgenic mouse B7, B8
KPVVSTQLLL gp160 252-261 gp120(252-261) 6978..7007 multiple human B7, B8
KIAIRSENISNNA gp160 269-281 gp120(269-281) 7029..7067 CRF02_AG human  
NAKTIIVHL gp160 280-288 gp120(280-288) 7062..7088 CRF01_AE human Cw*0602
AKTIIVHL gp160 281-288 gp120(281-288) 7065..7088 C human Cw*0602
AKTIIVQLTEPVE gp160 281-293 gp120(281-293) 7065..7103 CRF02_AG human  
VEINCTR gp160 292-298 gp120(292-298) 7098..7118 B human A2
CTRPNNNTRK gp160 296-305 gp120(296-305) 7110..7139 B, CRF01_AE, multiple human A2, A3
RPNNNTRKS gp160 298-306 gp120(298-306) 7116..7142 A human B7
RPYNNTRQS gp160 298-306 gp120(298-306) 7116..7142   human  
RPYNNTRRS gp160 298-306 gp120(298-306) 7116..7142   human  
RPYNNTRKS gp160 298-306 gp120(298-306) 7116..7142   human  
RPNNNTRKSI gp160 298-307 gp120(298-307) 7116..7145 B, C human, transgenic mouse B*0702, B*4201, B*4202, B7, B7?
RPNNNTRRGI gp160 298-307 gp120(298-307) 7116..7145 B human B7
RIGPGQTFY gp160 308-318 gp120(308-318) 7146..7178 B, D human  
RIQRGPGRAFVTIG gp160 308-321 gp120(308-321) 7146..7187 B mouse H-2Dd
RIQRGPGRAFVTIK gp160 308-321 gp120(308-321) 7146..7187   mouse  
RIQRGPGRAFTIGK gp160 308-322 gp120(308-322) 7146..7190 B mouse  
IYIGPGRAF gp160 309-317 gp120(309-317) 7149..7175 B human A*2402
ITVGPGQVFY gp160 309-318 gp120(309-318) 7149..7178 CRF01_AE human A11
HIGPGRAFY gp160 310-318 gp120(310-318) 7152..7178 B human A*3002, A2, A30
TLGPGRVLY gp160 310-318 gp120(310-318) 7152..7178 B human  
HIGPGRAFYTTKNI gp160 310-323 gp120(310-323) 7152..7193   mouse H-2Dd
IGPGRAFY gp160 311-318 gp120(311-318) 7155..7178   mouse H-2Dd
RGPGRAFVT gp160 311-319 gp120(311-319) 7155..7181 B transgenic mouse A2
IGPGRAFHT gp160 311-319 gp120(311-319) 7155..7181 B mouse H-2Dd
IFPFRAFYA gp160 311-319 gp120(311-319) 7155..7181 B human  
RGPGRAFYTT gp160 311-320 gp120(311-320) 7155..7184 B human A2
RGPGRAFVTI gp160 311-320 gp120(311-320) 7155..7184 A, B, C human, humanized mouse, macaque, mouse, transgenic mouse A*0201, A2, H-2d17, H-2d, H-2p, H-2u, H-2Dd, H-2Kd, H-2Ld, H-2d
MGPKRAFYAT gp160 311-320 gp120(311-320) 7155..7184   human A2
IGPGRAFYTT gp160 311-320 gp120(311-320) 7155..7184   mouse H-2Dd
RGPGRAFTVTI gp160 311-320 gp120(311-320) 7155..7184   mouse H-2Dd
IGPGRAFYAR gp160 311-320 gp120(311-320) 7155..7184 B human, mouse H-2Dd
IGPGRAFYAT gp160 311-320 gp120(311-320) 7155..7184   mouse H-2Dd
LGPGRVWYTT gp160 311-320 gp120(311-320) 7155..7184 B human  
GPGRAFVTI gp160 312-320 gp120(312-320) 7158..7184 B mouse H-2d, H-2Ld
GRAFVTIGK gp160 314-322 gp120(314-322) 7164..7190 B human B*2705, B27
EIIGDIRQAY gp160 321-330 gp120(321-330) 7185..7214 B human A*2501
SRAKWNNTL gp160 334-342 gp120(334-342) 7224..7250 B human B27
RVLKQVTEK gp160 340-348 gp120(340-348) 7242..7268 CRF01_AE human A11
NTLKQIVIKL gp160 340-349 gp120(340-349) 7242..7271   chimpanzee Patr-B14
TLSQIVTKL gp160 341-349 gp120(341-349) 7245..7271 B human A*0201
QFRNKTIVF gp160 352-361 gp120(352-361) 7278..7307 B human Cw*0401
PSSGGDLEITTHSF gp160 363-376 gp120(363-376) 7311..7352 C human B18
PEIVTHS gp160 369-375 gp120(369-375) 7329..7349   human A2
HSFNCGGEF gp160 374-382 gp120(374-382) 7344..7370 multiple human A3
SFNCGGEFF gp160 375-383 gp120(375-383) 7347..7373 A, B, C human B*1516, B15, B63, Cw*04, Cw*0401, Cw*0407, Cw4
SFTCGGEFF gp160 375-383 gp120(375-383) 7347..7373   human B15
SFNCGGEFFY gp160 375-384 gp120(375-384) 7347..7376 B human A29
SFNCRGEFFY gp160 375-384 gp120(375-384) 7347..7376 C human A29
FNCGGEFF gp160 376-383 gp120(376-383) 7350..7373   human Cw4
FNCGGEFFY gp160 376-384 gp120(376-384) 7350..7376 B human A29, B8
PNCGGEFFY gp160 376-384 gp120(376-384) 7350..7376   human A29
KNCGGEFFYCNS gp160 376-387 gp120(376-387) 7350..7385 B human A2
NCGGEFFYCN gp160 377-386 gp120(377-386) 7353..7382 B human  
NSGGEFFYSNS gp160 377-387 gp120(377-387) 7353..7385   human A2
GEFFYCDTS gp160 380-388 gp120(380-388) 7362..7388 A1 human  
FYCNTTQLF gp160 383-391 gp120(383-391) 7371..7397 B human A*2402, A24
FYCNSTQLF gp160 383-391 gp120(383-391) 7371..7397 CRF01_AE human  
STWNVNGTW gp160 393-400 gp120(393-400) 7401..7424 B human B27
LPCRIKQII gp160 416-424 gp120(416-424) 7470..7496 B human B*5101, B51
LPCRIKWII gp160 416-424 gp120(416-424) 7470..7496 B human B51
LPCRIKQFINMWQE gp160 416-429 gp120(416-429) 7470..7511   human DR4
RIKQIINMW? gp160 419-427 gp120(419-427) 7479..7505   human A29, A32
RIKQIINMW gp160 419-427 gp120(419-427) 7479..7505 A, B, C, CRF02_AG, D human A*3201, A32
RIKQFINMW gp160 419-427 gp120(419-427) 7479..7505 B human A32
NMWQEVGKAM gp160 425-434 gp120(425-434) 7497..7526 multiple human A2
WQEVGKAMY gp160 427-435 gp120(427-435) 7503..7529 CRF01_AE human  
MYAPPIGGQI gp160 434-443 gp120(434-443) 7524..7553   mouse H-2Kd
YAPPISGQI gp160 435-443 gp120(435-443) 7527..7553 B macaque Mamu-A1
RCSSNITGLL gp160 444-453 gp120(444-453) 7554..7583   human B56
EVFRPGGGDM gp160 466-475 gp120(466-475) 7620..7649 B human A*2601
NWRSELYKY gp160 478-486 gp120(478-486) 7656..7682 B human  
YKVVKIEPL gp160 486-494 gp120(486-494) 7680..7706 B human  
LGVAPTTTKRRWER gp160 494-508 gp120(494-508) 7704..7748 C human  
APTKAKRRV gp160 497-505 gp120(497-505) 7713..7739 CRF01_AE human  
APTKAKRRVV gp160 497-506 gp120(497-506) 7713..7742   human, transgenic mouse B7
RAVGMGALIFEFL gp160 511-523 gp120(511)-gp41(12) 7755..7793 CRF02_AG human  
GSTNGAASMTL gp160 527-537 gp41(16-26) 7803..7835   macaque  
TMGAASITL gp160 529-537 gp41(18-26) 7809..7835   human A2
LLRAIEAQQHL gp160 555-565 gp41(44-54) 7887..7919 CRF01_AE human A11.1
RAIEAQQM gp160 557-564 gp41(46-53) 7893..7916 C human Cw*0801
RAIEAQQHL gp160 557-565 gp41(46-54) 7893..7919 A, B, C, D human B*1501, B*51, B*5101, B15, B51, B57, B58, B63, Cw*03, Cw*0304, Cw12, Cw15, Cw3
RAIEAQQWQ gp160 557-565 gp41(46-54) 7893..7919   human B*5101, B51
RAIEAQQHM gp160 557-565 gp41(46-54) 7893..7919 C human Cw*0801, Cw8
RAIEVQQHL gp160 557-565 gp41(46-54) 7893..7919   human  
KAIEAQQHM gp160 557-565 gp41(46-54) 7893..7919   human  
RAIETQQHL gp160 557-565 gp41(46-54) 7893..7919   human  
RAIEAQQQM gp160 557-565 gp41(46-54) 7893..7919   human  
RAIEAQQHML gp160 557-566 gp41(46-55) 7893..7922 B human  
LLQLTVWGI gp160 565-573 gp41(54-62) 7917..7943 B, C human, transgenic mouse A2, A2 supertype
QTRVLAIERYL gp160 577-587 gp41(66-76) 7953..7985 C human B*5801, B*5802
ARVLAVERY gp160 578-586 gp41(67-75) 7956..7982 B human B27
VLALERYLKDQQL gp160 580-592 gp41(69-81) 7962..8000 CRF02_AG human  
VERYLKDQQL gp160 583-592 gp41(72-81) 7971..8000 B human A*0201, B14
ERYLKDQQL gp160 584-592 gp41(73-81) 7974..8000 A, A1, B, C, D human A*32, A32, B*0801, B*1401, B*1402, B14, B44
ERYLRDQQL gp160 584-592 gp41(73-81) 7974..8000 A, B, C, D human B*1401, B*1402, B14
ERYLKDQQLLG gp160 584-594 gp41(73-83) 7974..8006   human  
RYLRDQQL gp160 585-592 gp41(74-81) 7977..8000 B human A*2402
RYLKDQQL gp160 585-592 gp41(74-81) 7977..8000 B human B27
RYLKDQQLL gp160 585-593 gp41(74-82) 7977..8003 B, C human A*23, A*2301, A*2402, A23, A24, Cw*0702
RYLRDQQLL gp160 585-593 gp41(74-82) 7977..8003 B human A*2402
RYLRDQQLLGI gp160 585-595 gp41(74-84) 7977..8009 B human A*2402
YLKDQQLL gp160 586-593 gp41(75-82) 7980..8003 A, B, CRF01_AE human, macaque A*2402, A24, B*0801, B8
YLRDQQLL gp160 586-593 gp41(75-82) 7980..8003   human A24
YLRDQQLLGIWGC gp160 586-598 gp41(75-87) 7980..8018   human Cw7
LGIWGCSGKLICTT gp160 593-606 gp41(82-95) 8001..8042 A, C human  
TTTVPWNVSW gp160 605-614 gp41(94-103) 8037..8066 B human B*5701
TAVPWNASW gp160 606-614 gp41(95-103) 8040..8066 B human B*3501, B35
TAVPWNSSW gp160 606-614 gp41(95-103) 8040..8066 B, C human B*3501
TTVPWNVSW gp160 606-614 gp41(95-103) 8040..8066   human B*5701
TNVPWNSSW gp160 606-614 gp41(95-103) 8040..8066 B human  
VAPWNSFAL gp160 607-616 gp41(96-105) 8043..8072 B human  
NYTSLIYNL gp160 637-645 gp41(126-134) 8133..8159 B human Cw*0702
NYTQIIYNL gp160 637-645 gp41(126-134) 8133..8159 A human  
QELLALDKW gp160 658-666 gp41(147-155) 8196..8222 D human  
WLWYIKIFI gp160 678-686 gp41(167-175) 8256..8282 B human A*0201, A2, A2.1
WLWYIRIFI gp160 678-686 gp41(167-175) 8256..8282 B human  
WYIKIFIMI gp160 680-688 gp41(169-177) 8262..8288 B, C, CRF01_AE human A*2402
WYIRIFIMI gp160 680-688 gp41(169-177) 8262..8288 C human  
WYIKIFIII gp160 680-688 gp41(169-177) 8262..8288 B, C, CRF01_AE human  
YIKIFIMIV gp160 681-689 gp41(170-178) 8265..8291   human, transgenic mouse A2
RAFVTIPNPLLGLD gp160 683-696 gp41(172-185) 8271..8312   macaque  
FIMIVGGLV gp160 685-693 gp41(174-182) 8277..8303 B human A*0201
VFAVLSIVNR gp160 698-707 gp41(187-196) 8316..8345 B human A*3303, B7
AVLSVVNRV gp160 700-708 gp41(189-197) 8322..8348   human A2
IVNRVRQGY gp160 704-712 gp41(193-201) 8334..8360   human A*3002, A30
IVNRNRQGY gp160 704-712 gp41(193-201) 8334..8360 B human A*3002, A30
VINRVRQGY gp160 704-712 gp41(193-201) 8334..8360   human  
IVNRVRQGYSP gp160 704-714 gp41(193-203) 8334..8366 B human  
YSPLSLQTL gp160 712-720 gp41(201-209) 8358..8384 B human Cw*01, Cw*0102
RSIRLVSGFL gp160 744-753 gp41(233-242) 8454..8483   human  
RLVSGFLAL gp160 747-755 gp41(236-244) 8463..8489 CRF01_AE human A2
RLVNGSLAL gp160 747-755 gp41(236-244) 8463..8489   human A2
VTGFLALAW gp160 749-757 gp41(238-246) 8469..8495   human  
VNGFLALAW gp160 749-757 gp41(238-246) 8469..8495   human  
VSGFLALAW gp160 749-757 gp41(238-246) 8469..8495 A, B, C, D human  
LRSLFLFS gp160 760-767 gp41(249-256) 8502..8525   human A*2301
SYRRLRDLL gp160 767-775 gp41(256-264) 8523..8549 B human A*2402
SYHRLRDFI gp160 767-775 gp41(256-264) 8523..8549 A mouse H-2Kd
SYHRLRDLLLIVTR gp160 767-780 gp41(256-269) 8523..8564 B human A3, A31
HRLRDLLLI gp160 769-777 gp41(258-266) 8529..8555   human  
RLRDLLLIV gp160 770-778 gp41(259-267) 8532..8558 A, B, C human, transgenic mouse A*0201, A2
RLRDLLLIVTR gp160 770-780 gp41(259-269) 8532..8564 B, C human A*0301, A*3101, A3, A31
IVTRIVELL gp160 777-785 gp41(266-274) 8553..8579 B human A*6802, A68
GRRGWEALK gp160 786-794 gp41(275-283) 8580..8606 B human B*2705, B27, B57
GRRGWEALKY gp160 786-795 gp41(275-284) 8580..8609 B human B*2705, B27
GRRGWEVLKY gp160 786-795 gp41(275-284) 8580..8609 B human B27
RRGWEVLKY gp160 787-795 gp41(276-284) 8583..8609 B human A*01, A*0101, A1
QRGWEVLKY gp160 787-795 gp41(276-284) 8583..8609 B human A1
KYCWNLLQY gp160 794-802 gp41(283-291) 8604..8630 B human A*3002, A30
KYLGSLVQY gp160 794-802 gp41(283-291) 8604..8630 A1, D human, macaque A*3002
KYCWNLLQY ? gp160 794-802 gp41(283-291) 8604..8630   human A*3002
KYWWNLLQY gp160 794-802 gp41(283-291) 8604..8630 B, C human  
KYLWNLLQY gp160 794-802 gp41(283-291) 8604..8630 B human  
LLQYWSQEL gp160 799-807 gp41(288-296) 8619..8645 B human A*0201
LLLYWGRELK gp160 799-808 gp41(288-297) 8619..8648   human  
VQYWGLELK gp160 800-808 gp41(289-297) 8622..8648 CRF01_AE human  
QELKNSAVSL gp160 805-814 gp41(294-303) 8637..8666 B human B*4001, B40, B60, B61
QELKNSAVNL gp160 805-814 gp41(294-303) 8637..8666 B human B40
SAISLLDTI gp160 810-818 gp41(299-307) 8652..8678 C human B*5801
SLLNATAIAV gp160 813-822 gp41(302-311) 8661..8690 B, CRF01_AE human, transgenic mouse A2
SLLNATDIAV gp160 813-822 gp41(302-311) 8661..8690 B human, mouse A*0201, A2, A68
LLNATAIAV gp160 814-822 gp41(303-311) 8664..8690 B human A*0201, A2
LLNATDIAV gp160 814-822 gp41(303-311) 8664..8690 B human A*0201
LLDTIAIAV gp160 814-822 gp41(303-311) 8664..8690 C human A*0201, A*0205
VAEGTDRVIEI gp160 822-832 gp41(311-321) 8688..8720   human  
EGTDRIVIEI gp160 824-832 gp41(313-321) 8694..8720 B human  
RVIEVLQRA gp160 828-836 gp41(317-325) 8706..8732 B human A*0201
RVIEVAQRV gp160 828-836 gp41(317-325) 8706..8732 B human A*0201
KVIEVAQGA gp160 828-836 gp41(317-325) 8706..8732 CRF01_AE human A2
EVAQRAYR gp160 831-838 gp41(320-327) 8715..8738 B human A*3303
EVVQRAYR gp160 831-838 gp41(320-327) 8715..8738 B human  
VQRTCRAIL gp160 833-841 gp41(322-330) 8721..8747 B human  
RAYRAILHI gp160 835-843 gp41(324-332) 8727..8753   human B*5101, B51
IPRRIRQGL gp160 843-851 gp41(332-340) 8751..8777 A, A1, B, C, CRF01_AE, D human, transgenic mouse A*0201, B*0702, B7
IPRRIRQGF gp160 843-851 gp41(332-340) 8751..8777 A, A1, B, C, CRF01_AE, CRF06_cpx human B*4201, B7
IPRRRIRQGL gp160 843-851 gp41(332-340) 8751..8777   human B7
IPRRIRQGA gp160 843-851 gp41(332-340) 8751..8777   human  
IPTRIRQGL gp160 843-851 gp41(332-340) 8751..8777 B human  
IPRRIRQGLA gp160 843-852 gp41(332-341) 8751..8780 C human B*0702
RRIRQGLERILL gp160 845-856 gp41(334-345) 8757..8792 B human A30, B7, B8
RIRQGLERA gp160 846-854 gp41(335-343) 8760..8786 B human A*0205, A2
RQGLERALL gp160 848-856 gp41(337-345) 8766..8792 B human B8
QGLERALL gp160 849-856 gp41(338-345) 8769..8792 B human B8
WSKSSIIGW Nef 5-13   8809..8835 B human A*2501
WSKRSVPGW Nef 5-13   8809..8835 B human  
SKRSVPGWS Nef 6-14   8812..8838 B human  
SKRSVVGWPTVRER Nef 6-19   8812..8853 B human  
SVPGWSTVR Nef 9-17   8821..8847 B human  
VEWPAVRERM Nef 11-20   8827..8856 B human  
WPAIRERM Nef 13-20   8833..8856 B, C human B*0801, B8
WPTVRERM Nef 13-20   8833..8856 B human B*0801, B8
WPAVRERI Nef 13-20   8833..8856 C human B*0801
WSMVRERM Nef 13-20   8833..8856 B human  
AVRERIRRT Nef 15-23   8839..8865 C human B*0702
AVRERMRRT Nef 15-23   8839..8865 C human B7, B8
TVRERMRRA Nef 15-23   8839..8865 B human  
DRVRRTEPA Nef 18-26   8848..8874 B human  
RMRRAEPAA Nef 19-27   8851..8877 B human B*15, B15, B62
RVRRTEPAA Nef 19-27   8851..8877 B human  
VRRTEPAAV Nef 20-28   8854..8880 B human  
RAEPAADGV Nef 22-30   8860..8886 B human  
GVGAVSRDL Nef 29-37   8881..8907 B human A2
GVGAASQDL Nef 29-37   8881..8907 C human A*0205
GVGAASRDL Nef 29-37   8881..8907 B human  
RDLEKHGAI Nef 35-43   8899..8925 B human  
LEKHGAITS Nef 37-45   8905..8931 B human B*4001, B40, B50
ALTSSNTAH Nef 42-50   8920..8946 C human A*0201
ALTSSNTAA Nef 42-50   8920..8946 C human, humanized mouse, mouse A*0201, A2
TAATNADCA Nef 48-56   8938..8964 B mouse H-2b
AATNADCAW Nef 49-57   8941..8967 B human  
EEGVGFPVRPQ Nef 63-73   8983..9015 C human B*4501
GEVGFPVRPQV Nef 64-74   8986..9018 C human B45
EEVGFPVKPQV Nef 64-74   8986..9018 C human B*4501
EEVGFPVRPQV Nef 64-74   8986..9018 C human B*4501
VGFPVRPQV Nef 66-74   8992..9018 B human A*0201
VGFPVTPQVPLRMT Nef 66-80   8992..9036   human A1, B8
FPVTPQVPL Nef 68-76   8998..9024 B human, transgenic mouse B*0702, B35, B7, B7 supertype
FPVRPQVPL Nef 68-76   8998..9024 A, B, C, D human, mouse B*0702, B*3501, B35, B7, B7 supertype
FPVKPQVPL Nef 68-76   8998..9024 B human B35, B7
FPVTPQVPLR Nef 68-77   8998..9027 B human, transgenic mouse B*0702, B35, B7
FPVRPQVPLR Nef 68-77   8998..9027 B human B7
FPVTPQVPLRMTY Nef 68-81   8998..9039 B human  
RPQVPLRPM Nef 69-79   9001..9033 A1, B, C, CRF06_cpx, D human B*0702, B*4201, B*4202, B*8101, B42, B7, B81
RPMTFKGAF Nef 69-79   9001..9033 C human B*4201, B*4202
TPQVPLRPM Nef 71-79   9007..9033 B human B*0702, B35, B42, B7, B7 supertype
RPQQVPLRPM Nef 71-79   9007..9033 C human B*4201, B*8101
RPQVPLRPM ? Nef 71-79   9007..9033   human B81
RPQVPLRPMTY Nef 71-81   9007..9039 A, B, D human, macaque B*3501, B35, B51
TPQVPLRPMTY Nef 71-81   9007..9039 B human B35, B7, B7 supertype
PQVPLRPMTY Nef 72-81   9010..9039 B, C human B*51, B35, B51
QVPLRPMTY Nef 73-81   9013..9039 A, B, C, CRF02_AG, D human A1, B*3501, B7
QVPLRPMTYK Nef 73-82   9013..9042 A, B, C, CRF01_AE, CRF02_AG, D human, macaque A*0201, A*0301, A*11, A*1101, A*31, A11, A2, A3, A3 supertype, A30, B27, B35, B8
QVPLRPMYTK Nef 73-82   9013..9042 C human A11, A3
QVPLRRMTYK Nef 73-82   9013..9042   human A3
SVPLRPMTYK Nef 73-82   9013..9042 B human B35, C*04, Cw4
QVPLRPMTYKA Nef 73-83   9013..9045 B human A3
VPLRPMTY Nef 74-81   9016..9039 A, B, C, D, HIV-2 human, macaque A11, A3, B*3501, B35, B42
VPLRPMTF Nef 74-81   9016..9039 C human B*3501
VPLRPMTYK Nef 74-82   9016..9042   human A11
PLRPMTYK Nef 75-82   9019..9042 B human A*1101, A11
PLRPMYTK Nef 75-82   9019..9042 C human A11
LRPMTYKAA Nef 76-84   9022..9048 B human B*2703
RPMTYKAAL Nef 77-85   9025..9051 B human, transgenic mouse B*0702, B7
RPMTYKAAV Nef 77-85   9025..9051 B, C, CRF01_AE, CRF02_AG human B*0702, B7
RPMTYKGAL Nef 77-85   9025..9051 B, C human B7, B7 supertype
MTYKAAFDL Nef 79-87   9031..9057 C human A*0201
MTYKAALDL Nef 79-87   9031..9057   human, humanized mouse, mouse A*0201, A2
MTYKAAVDL Nef 79-87   9031..9057 B, C human B63
TYKAAVDL Nef 80-87   9034..9057 B, CRF02_AG human A24
YKGALDLSHFL Nef 81-91   9037..9069 B human  
KAAVDLSHF Nef 82-90   9040..9066 B human B*5801, B57
KAAFDLSFF Nef 82-90   9040..9066 C human B*5701, B*5702, B*5703, B*5801, B57
KAALDLSHF Nef 82-90   9040..9066 B human B*5701, B57
KSALDLSHF Nef 82-90   9040..9066 B human B57
KGALDLSHF Nef 82-90   9040..9066   human B*5801, B57
KGAFDLSFF Nef 82-90   9040..9066 C human B57
KAAVDLSFF Nef 82-90   9040..9066 C human  
KAALDLSHFL Nef 82-91   9040..9069 B human A2
KAAVDLSHFL Nef 82-91   9040..9069 B human Cw*0802, Cw8
KAAFDLSFFL Nef 82-91   9040..9069 C human Cw*0804
KAAVDLSMFL Nef 82-91   9040..9069   human Cw8
AAVDLSHF Nef 83-90   9043..9066 B, CRF01_AE human B62
AAVDLSHFL Nef 83-91   9043..9069 A1, B, CRF01_AE, CRF02_AG human A2, A68, B60, B62, Cw*03, Cw*0802, Cw8
AALDLSHFL Nef 83-91   9043..9069 B human, humanized mouse, mouse A*0201, A2, Cw3
GAFDLSFFL Nef 83-91   9043..9069 B, C human A*0205, A3
GAFDLSFFL ? Nef 83-91   9043..9069   human A*0205
GALDLSHFL Nef 83-91   9043..9069 A1, B, C, CRF02_AG human A2
AAFDLSFFL Nef 83-91   9043..9069 C human B*5703, Cw*0602
AALDMSHFL Nef 83-91   9043..9069   human Cw3
GALDLSFFL Nef 83-91   9043..9069 B human  
GAVDLSHFL Nef 83-91   9043..9069 B human  
GAFDLSFFLK Nef 83-92   9043..9072 CRF01_AE human A11
AAVDLSHFLK Nef 83-92   9043..9072 B human A11
AAVDLSHFLKEK Nef 83-94   9043..9078   human A11
ALDLSHFL Nef 84-91   9046..9069 B human A2
AVDLSHFL Nef 84-91   9046..9069 B, CRF02_AG human A2, B62
AVDLSHFLK Nef 84-92   9046..9072 A, A1, B, CRF01_AE, CRF02_AG, D, F human, macaque A*0301, A*11, A*1101, A11, A3, Cw8
ALDLSHFLK Nef 84-92   9046..9072 A1, B, D human A*1101
AFDLSFFLK Nef 84-92   9046..9072 B, C, CRF01_AE human  
DLSHFLKEK Nef 86-94   9052..9078 A, B, CRF01_AE, D, F human, macaque A*0301, A11, A3
DLSFLKEK Nef 86-94   9052..9078 C human A11, A3
LSHFLKEKGGLEG Nef 87-99   9055..9093   human  
SHFLKEKGGLEGL Nef 88-100   9058..9096 C human  
HFLKEKGGL Nef 89-97   9061..9087 B human  
FLKEKGGL Nef 90-97   9064..9087 A, AE, B, C, CRF02_AG, D, F, G, H human, macaque A*0201, A2, A3, B*0801, B8
SLKEKGGL Nef 90-97   9064..9087 B human B8
LLKEKGGL Nef 90-97   9064..9087 B human B8
FLKEKGGL ? Nef 90-97   9064..9087   human B8
FLKEMGGL Nef 90-97   9064..9087 B human B8
FLKEKGGLEGL Nef 90-100   9064..9096 B human A2
KEKGGLEGL Nef 92-100   9070..9096 A, AE, B, C, D, F, G, H human A11, B*4001, B*4002, B*4403, B40, B60, B61
KEKGGLEGLVYSQK Nef 92-105   9070..9111 B human  
EKGGLEGLIHSQRR Nef 93-106   9073..9114   human A1, B8
IHSQRRQDI Nef 101-109   9097..9123 B human A24
IYSQKRQDI Nef 101-109   9097..9123 B human  
HSQRRQDIL Nef 102-110   9100..9126 C human  
HSKRRQDIL Nef 102-110   9100..9126 C human  
HSQKRQDIL Nef 102-110   9100..9126 B human  
HSQRRQDILDLWIY Nef 102-115   9100..9141 B human B7
QRRQDILDL Nef 104-112   9106..9132 B human  
KRRQDILDLWVY Nef 104-115   9106..9141 C human CW*0702, Cw*0701
KRQEILDLW Nef 105-113   9109..9135 C human  
RRQDILDLWI Nef 105-114   9109..9138 B human, macaque B*2705, B27
RRQDILDLWVY Nef 105-115   9109..9141 B, C human B*1801, B18, Cw*07, Cw*0701, Cw*0702
KRQEILDLWVY Nef 105-115   9109..9141 B, C human B*1801, B*4403, B18, Cw*07, Cw*0701, Cw*0702, Cw7
KRQDILDLWIY Nef 105-115   9109..9141 C human Cw*0701, Cw*0702
KRQDILDLWVY Nef 105-115   9109..9141 B, C human Cw*0701, Cw7
KRQDILDWVY Nef 105-115   9109..9141 B human Cw*0702
KRQEILDWVY Nef 105-115   9109..9141 B human Cw*0702
KKQEILDLWVY Nef 105-115   9109..9141 C human Cw7
RRQDILDLWIY Nef 105-115   9109..9141 B human Cw7
RQDILDLWI Nef 106-114   9112..9138 B human B13, B7
RQDILDLWV Nef 106-114   9112..9138 B, C human B*1302, B13
RQDILDLWIY Nef 106-115   9112..9141   human B7
RQDILDLWVY Nef 106-115   9112..9141 B, C human B7, Cw7
QDILDLWIY Nef 107-115   9115..9141 B, C human B18
QEILDLWVY Nef 107-115   9115..9141 A, A1, B, C, CRF01_AE, CRF02_AG human B44
DILDLWIY Nef 108-115   9118..9141 B human Cw*0701, Cw7
DILDLWVH Nef 108-115   9118..9141 B human  
ILDLWVYHT Nef 109-117   9121..9147 B, C human A*0201, A2
ILDLWIYHT Nef 109-117   9121..9147 B human  
WIYHTQGYF Nef 113-121   9133..9159 B human A1
WIYHTQGYFPDWQ Nef 113-125   9133..9171   human B17
VYHTQGYFPDWQNY Nef 114-127   9136..9177   human  
YHTQGYFPDW Nef 115-124   9139..9168 C human B17
YHTQGYFPDWQ Nef 115-125   9139..9171   human B17
HTQGYFPDW Nef 116-124   9142..9168 B, C, CRF02_AG human B*5701, B*5703, B*58, B*5801, B57, B58
HTQGFFPDW Nef 116-124   9142..9168 C human B*5703, B*5801
HTQGYFPDWQ Nef 116-125   9142..9171 B, C human B57, B63
TQGYFPDWQNY Nef 117-127   9145..9177 B, C human B*15, B*1501, B15, B62
TQGYFPDWQNYT Nef 117-128   9145..9180   human B17, B37
QGYFPDWQNY Nef 118-127   9148..9177 B human B62
GYFPDWQNY Nef 119-127   9151..9177 B, C, CRF02_AG, D human A24
YFPDWQNY Nef 120-127   9154..9177 B, C human A*2902, A*3002, A29, B*5801, B57
YFPDWQNYT Nef 120-128   9154..9180 A1, B, C human A1, A29, B*3501, B*3701, B*51, B*5701, B*5801, B37, B57, B58, B63, Cw6
FFPDWKNYT Nef 120-128   9154..9180   human B15, B51
YFPDWQDYT Nef 120-128   9154..9180 B human B57
YFPDWQNYTP Nef 120-129   9154..9183 B human B57
FPDWQNYT Nef 121-128   9157..9180 B, CRF01_AE human A*01, A1
FPDWQNYTP Nef 121-129   9157..9183 B human B*5401
NYTPGPGVRY Nef 126-135   9172..9201 B human A24
NYTPGPGVRYPLT Nef 126-138   9172..9210   human B7
YTPGPGIRY Nef 127-135   9175..9201 B, C human B57, B58, B63
YTPGPGVRY Nef 127-135   9175..9201 C human B*5801
YTPGPGTRY Nef 127-135   9175..9201 C, CRF01_AE human  
TPGPGVRY Nef 128-135   9178..9201 B human B*0702, B7 supertype
TPGPGVRYP Nef 128-136   9178..9204 B human B7
TPGPGVKYPL Nef 128-137   9178..9207   human, transgenic mouse B7
TPGPGVRYPL Nef 128-137   9178..9207 B, C human, macaque B*0702, B*4201, B*4202, B*8101, B35, B42, B7, B7 supertype
TPGPGIRYPL Nef 128-137   9178..9207 B human B*0702, B42
TPGPGTRYPL Nef 128-137   9178..9207 B human B35
TPGPGRFPL Nef 128-137   9178..9207 B human  
GPGVRYPLTF Nef 130-139   9184..9213 B, C human B35
GPGVRYPLTFGWCY Nef 130-143   9184..9225 B human B57
GPGIRYPLTFGWCF Nef 130-143   9184..9225   human B*5801, B57
GIRYPLTFGWCFK Nef 132-144   9190..9228   human  
TRYPLTFGW Nef 133-141   9193..9219 B human A33
VRYPLTFGW Nef 133-141   9193..9219 C human B27
GRFPLTFGW Nef 133-141   9193..9219 B human  
IRYPLTFGWC Nef 133-142   9193..9222 B human B27
RYPLTFGW Nef 134-141   9196..9219 B, C human A*2301, A*2402, A23, A24, A33, B27, B35, B53
RFPLTFGW Nef 134-141   9196..9219 B human  
RYPLTFGWCF Nef 134-143   9196..9225 B, C human A*2301, A*2402, A11, A24
RYPLTFGWCY Nef 134-143   9196..9225 B, CRF01_AE, CRF02_AG human A*2402, A24, B35
RYPLTFGWCFY Nef 134-144   9196..9228 B human A11
RYPLTFGWCYK Nef 134-144   9196..9228 B human B18
YPLTFGWCF Nef 135-143   9199..9225 B, C, D human A2, B*0702, B*1801, B*3501, B*53, B*5301, B18, B35, B53
YPLTFGWCY Nef 135-143   9199..9225 B, CRF02_AG human B*0702, B*1801, B*3501, B*5301, B18, B35, B49, B53, B7, B7 supertype
YPLTGWCF Nef 135-143   9199..9225 B human B*1801
YLPTFGWCY Nef 135-143   9199..9225 B human B49
PLTFGWCYK Nef 136-144   9202..9228 B human A3
PLTFGWCYKL Nef 136-145   9202..9231 B, CRF01_AE human A*0201, A2
PLTFGWCFKL Nef 136-145   9202..9231 B human, transgenic mouse A*0201, A2
PLTFGWCYKLV Nef 136-146   9202..9234 B human A*0201
LTFGWCFKL Nef 137-145   9205..9231 A, B, C human, mouse A*0201, A2, A2 supertype, B*1517, B57, B63
LTFGWCYKL Nef 137-145   9205..9231 B human A2
LTFGWCFKLV Nef 137-146   9205..9234 B human A2, A2 supertype
LTFGWCYKLV Nef 137-146   9205..9234 B human  
WCFKLVPV Nef 141-148   9217..9240   human, transgenic mouse A2
VPVEPEKVEEA Nef 146-156   9232..9264 B human B*5401
HPVSLHGMDDPE Nef 166-177   9292..9327   human B35
IEDPEKEVL Nef 173-181   9313..9339 B human  
DPEKEVLEW Nef 175-183   9319..9345 B human  
DPEKEVLQWK Nef 175-184   9319..9348 B human B7
EREVLVWKF Nef 177-185   9325..9351 B human B27
VLEWRFDSRL Nef 180-189   9334..9363 B, CRF01_AE human, mouse A*0201, A2
VLMWQFDSRL Nef 180-189   9334..9363 B transgenic mouse A*0201
VLMWKFDSRL Nef 180-189   9334..9363 B human  
LEWRFDITL Nef 181-189   9337..9363 B human A*0201
LEWRFDSRL Nef 181-189   9337..9363   human A2
EWRFDSRL Nef 182-189   9340..9363 B human B8
WVFDSSLAR Nef 183-191   9343..9369 C human A*0123
WRFDSRLAF Nef 183-191   9343..9369 A, B human B*15, B*1503, B15
WKFDSRLAF Nef 183-191   9343..9369 A, B, C human B*1503
WRFDSKLAF Nef 183-191   9343..9369 B human  
WRFDSRLAFH Nef 183-192   9343..9372 B human A1
WRFDSRLAHH Nef 183-193   9343..9375 B human A1
RFDSRLAF Nef 184-191   9346..9369 B, CRF01_AE human A1
RFDSRLAFH Nef 184-192   9346..9372 B human A*01
DSRLAFHH Nef 186-193   9352..9375 B human B35
DSRLAFHHM Nef 186-194   9352..9378 B human A24
DSRLAFHHV Nef 186-194   9352..9378 B human B*51, B51
RLAFHHVAR Nef 188-196   9358..9384 B human A11, A3, B52
SLAFRHVAR Nef 188-196   9358..9384 B human A*3101
SLARRHLAR Nef 188-196   9358..9384 C human A*7401
KLAFHHVAR Nef 188-196   9358..9384 B human  
RLAFHHMAR Nef 188-196   9358..9384 B human  
RLAFHHVARELHPE Nef 188-201   9358..9399 B human B35, Cw4
LAFHHVAREL Nef 189-198   9361..9390 B human  
AFHHVAREL Nef 190-198   9364..9390 B, CRF01_AE human A*0201, A*0202, A2, A24, A3, B*0801, B52
ALKHRAYEL Nef 190-198   9364..9390 A human, macaque A*0201, A2
ALHHVAREL Nef 190-198   9364..9390 B human A2
AFHHVAREK Nef 190-198   9364..9390 B human A3, B51
AFHHMAREL Nef 190-198   9364..9390 B human B*0801
ARELHPEY Nef 195-202   9379..9402 B, CRF02_AG human A1
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