HIV molecular immunology database

 

Antibody Epitope Summary

Download antibody epitope summary as CSV or XLS files.

This is a list of all HIV antibody binding sites mapped to within a region of 21 amino acids or less. The epitope sequence, MAb name, HXB2 location, subtype, and host species are provided. Identical entries are shown only once. The epitope sequence is a link to the database that will provide details of all binding sites containing that sequence.

Data last updated at 2014-12-08 14:39:16-07
Epitope MAb Name Protein HXB2 location Subprotein HXB2 DNA Contig Subtype Species
GELDRWEKIRLRPGG L14.17 Gag 11-25 p17(11-25) 820..864 B mouse
ELDRWEKI + ALDKIE 32/5.8.42 Gag 12-19,100-105 p17(12-19)+p17(100-105) 823..846, 1087..1104   mouse
ELDKWEKIRLRPGGKTLY HyHIV-1 Gag 12-29 p17(12-29) 823..876   mouse
ELDKWEKIRLRPGGKTLY? HyHIV-4 Gag 12-29 p17(12-29) 823..876   mouse
EKIRLR 32/1.24.89 Gag 17-22 p17(17-22) 838..855   mouse
IRLPGGKKKYMLKHVVWAA 3B10 Gag 19-38 p17(19-38) 844..903   mouse
NIGPGGRALYTT 10-188 Gag 20-31 p17(20-31) 847..882 A human
GKTHYMINPL polyclonal Gag 25-34 p17(25-34) 862..891   rabbit
LETSEGCRQILGQLQ B4f8 Gag 51-65 p17(51-65) 940..984   rat
GQLQPSLQTGSEELRSL 12H-D3b3 Gag 62-78 p17(62-78) 973..1023   rat
LEKIEEEQNKSKKKA? 11H9 Gag 101-115 p17(101-115) 1090..1134   mouse
KKAQQAAADT 3-H-7 Gag 113-122 p17(113-122) 1126..1155 B mouse
AAGTGNSSQVSQNY 1D9 Gag 119-132 p17(119-132) 1144..1185   mouse
DTGHSSQVSQNY 15-21 Gag 121-132 p17(121-132) 1150..1185   mouse
PIVQNIQGQMVHQAISPRTL 111/182 Gag 133-152 p24(1-20) 1186..1245   mouse
VHQAISPRTLNAWVK ID8F6 Gag 143-157 p24(11-25) 1216..1260   mouse
AISPRTLNAW F5-2 Gag 146-155 p24(14-23) 1225..1254 B mouse
NAWVK CB-13/5 Gag 153-157 p24(21-25) 1246..1260   mouse
SEGATPQDLNTMLNTVG polyclonal Gag 176-192 p24(44-60) 1315..1365 B mouse
EGATPQ 3D3 Gag 177-182 p24(45-50) 1318..1335 B mouse
GATPQDLNTML CD-4/1 Gag 178-188 p24(46-56) 1321..1353   mouse
ATPQDLNTML 15F8C7 Gag 179-188 p24(47-56) 1324..1353   mouse
DLNTMLNTVG 111/052 Gag 183-192 p24(51-60) 1336..1365   mouse
AAMQMLKETINE 91-5 Gag 196-207 p24(64-75) 1375..1410   human
LKETINEEAAEWDRVHPV 1109/01 Gag 201-218 p24(69-86) 1390..1443 B mouse
ETINEEAAEWD 111/073 Gag 203-213 p24(71-81) 1396..1428   mouse
ETINEEAAEWDRVHP 10-E-7 Gag 203-217 p24(71-85) 1396..1440 B mouse
EAAEWDRVHP 1-B-7 Gag 208-217 p24(76-85) 1411..1440   mouse
EAAEWDRVHPVHAGP FF1 Gag 208-222 p24(76-90) 1411..1455 B mouse
DRVHPVHAGP 113/072 Gag 213-222 p24(81-90) 1426..1455   mouse
RVHPVHAGPIAPGQMREPRGS 25.3 Gag 214-234 p24(82-102) 1429..1491   mouse
HPVHAGPIAPG 13-102-100 Gag 216-226 p24(84-94) 1435..1467   mouse
HAGPIAPGQMREPRG RL4.72.1 Gag 219-233 p24(87-101) 1444..1488   mouse
GSDIAGTTSTLQEQIGWMTNN 406/01 Gag 233-253 p24(101-121) 1486..1548   mouse
GSDIAGTTSTLQEQIGWMTNL polyclonal Gag 233-253 p24(101-121) 1486..1548 B mouse
NPPIPVGEIY 38:9.6K Gag 253-262 p24(121-130) 1546..1575 B mouse
NPPIPVGEIYKRWII EB1A9 Gag 253-267 p24(121-135) 1546..1590 B mouse
RMYSPT LH-104-E Gag 275-280 p24(143-148) 1612..1629   mouse
SILDIR 1B2C12 Gag 281-286 p24(149-154) 1630..1647   mouse
DIRQGP + QGVGGP LH-104-A Gag 284-289,351-356 p24(152-157)+p24(219-224) 1639..1656, 1840..1857   mouse
CVKQGPKEPFQSYVDRFYKSL 1.17.3 Gag 284-304 p24(152-172) 1639..1701   mouse
IRQGPKEPFRDYVDRFYKTL 23A5G4 Gag 285-304 p24(153-172) 1642..1701 B mouse
QGPKEPFRDYVDRFY V10 Gag 287-301 p24(155-169) 1648..1692   mouse
GPKEPF + QGVGGP LH-104-C Gag 288-293,351-356 p24(156-161)+p24(219-224) 1651..1668, 1840..1857   mouse
FRDYVDRFYK 12-B-4 Gag 293-302 p24(161-170) 1666..1695 B mouse
KTLRAEQASQEVKNWMTET 9A4C4 Gag 302-320 p24(170-188) 1693..1749   mouse
TLRAEQASQEVKNWM 11C10B10 Gag 303-317 p24(171-185) 1696..1740 B mouse
QASQEVKNWMTETLL BE3 Gag 308-322 p24(176-190) 1711..1755 B mouse
VKNWMTETLL 108/03 Gag 313-322 p24(181-190) 1726..1755   mouse
ILKALGPAATLEEMM FH2 Gag 333-347 p24(201-215) 1786..1830 B mouse
LGPAATLEEM 13B5 Gag 337-346 p24(205-214) 1798..1827   mouse
LEEMMTACQGVGGPGHKARV 106/01 Gag 343-362 p24(211-230) 1816..1875   mouse
GHKARV LH-104-B Gag 357-362 p24(225-230) 1858..1875   mouse
HKARVL LH-104-I Gag 358-363 p24(226-231) 1861..1878   mouse
LAEAMS LH-104-G Gag 363-368 p24(231)-p2p7p1p6(5) 1876..1893   mouse
NFRNQRKIVK i5B11 Gag 382-391 p2p7p1p6(19-28) 1933..1962   rat
PRKKGCWKCG EC6 Gag 408-417 p2p7p1p6(45-54) 2011..2040 B mouse
RQANFLGKIWPSYKGR DG8 Gag 429-444 p2p7p1p6(66-81) 2074..2121   mouse
YKGRPGNFL AD2 Gag 441-449 p2p7p1p6(78-86) 2110..2136   mouse
PQIYLWQ 1696 Pol 57-63 Protease(1-7) 2253..2273   mouse
MSLPGRWKPKM 10E7 Pol 92-102 Protease(36-46) 2358..2390 B hamster, mouse
LPGRWKPK 13E1 Pol 94-101 Protease(38-45) 2364..2387 B hamster
KKDSTKWRK 1E8 Pol 220-228 RT(65-73) 2742..2768   mouse
KDSWTVNDIQKLVGK polyclonal Pol 404-418 RT(249-263) 3294..3338   human
PLTEEAELE 1.152 B3 Pol 449-457 RT(294-302) 3429..3455   mouse
LTEEAELELA polyclonal Pol 450-459 RT(295-304) 3432..3461   human
KTGKY 1.153 G10 Pol 505-509 RT(350-354) 3597..3611   mouse
TTESIVIW RTMAb8 Pol 531-538 RT(376-383) 3675..3698   mouse
GKIP 1D4A3 Pol 539-542 RT(384-387) 3699..3710   mouse
VDGAANRET 1.160 B3 Pol 597-605 RT(442-450) 3873..3899   mouse
IIEQLIKKEKV polyclonal Pol 676-686 RT(521-531) 4110..4142   human
VPAHKGIGGNEQVD C2003 Pol 691-704 RT(536-549) 4155..4196   rabbit
FLDGIDKAQDEHEKYH 1C4 Pol 716-731 Integrase(1-16) 4230..4277 B mouse
DFNLPPVVAKE 17 Pol 740-750 Integrase(25-35) 4302..4334   mouse
KCQLKGEAMHGQVD 4D6 Pol 757-770 Integrase(42-55) 4353..4394 B mouse
SQGVVESMNKELKKIIGQVR a4 Pol 862-881 Integrase(147-166) 4668..4727   mouse
VESMNKELKKIIG anti-K159 Pol 866-878 Integrase(151-163) 4680..4718   rabbit
KELQKQITKIQNFRVYY 8-6 Pol 926-942 Integrase(211-227) 4860..4910 B mouse
RDSRNPLWK 19 Pol 943-951 Integrase(228-236) 4911..4937 B mouse
GPAKLLWKGEGAVVIQ 8-22 Pol 952-967 Integrase(237-252) 4938..4985 B mouse
DNSDIKVVP 4-20 Pol 968-976 Integrase(253-261) 4986..5012 B mouse
RRKAKIIRD 6-19 Pol 977-985 Integrase(262-270) 5013..5039 B mouse
RRKAKIIRDY 7C3 Pol 977-986 Integrase(262-271) 5013..5042 B mouse
KAKIIRDYGK MAb 35 Pol 979-988 Integrase(264-273) 5019..5048   mouse
KARGWFYRHHYESP? TG002 Vif 34-47   5140..5181   mouse
KPQKTKGHRGSHTMNGH? TG001 Vif 176-192   5566..5616   mouse
MEPVDRPLEPWKHPG polyclonal Tat 1-15   5831..5875 B macaque
MEPVDPRLEPWKHPGSQPKT? polyclonal Tat 1-20,1-20   5831..5890, 5831..5890 B mouse
MEPVDPRLEPGSQPKT TA9 Tat 1-20   5831..5890 B mouse
EPVDPNLEPWNHPS NT3/2D1.1 Tat 2-15   5834..5875   mouse
EPVDPRLEWKHPGSQ 1.2 Tat 2-17   5834..5881   mouse
EPVDPRLEWKHPGSQPKTA 1D9D5 Tat 2-21   5834..5893   mouse
PKLEPWHP 11H6H1 Tat 6-14   5846..5872   mouse
ACTNCYCKKCCFHCQVCFTT polyclonal Tat 21-40   5891..5950 B mouse
GISYGRKKRRQRRPPQG TB12 Tat 44-60   5960..6010 B mouse
SYGRKKRRQRRRAHQ polyclonal Tat 46-60   5966..6010 B macaque
SYGRKKRRQRRRAHQ? polyclonal Tat 46-60   5966..6010 B mouse
YGRKKRRQRRRPPQ polyclonal Tat 47-60   5969..6010   human
RQRRRAHQNSQTHQAS polyclonal Tat 53-68   5987..6034 B mouse
PTSQPRGDPTGPKE NT2/4D5.24 Tat 73-86   8380..8421   mouse
PTSQPRGDPTGPKE? polyclonal Tat 73-86,73-86   8380..8421, 8380..8421 B mouse
QPRGDPTGPKQKKK polyclonal Tat 76-89   8389..8430 B macaque
SGDSDEELIRT? 4G9 Rev 5-15   5982..6014   mouse
EGTRQARRNRRRWRERQR Ab2 Rev 32-50   8396..8452    
GTRQARRNRRRRWRER? 10.1 Rev 33-48   8399..8446    
RRNRRR 3H6 Rev 38-43   8414..8431   mouse
PVPLQLPPLERLTLD 8E7 Rev 70-84   8510..8554   mouse
PLQLPPLERLTLDCNEDCGT Ab4 Rev 72-91   8516..8575    
GVGSPQILVE 1G10 Rev 96-105   8588..8617   mouse
ILVESPTVLESDKTE Ab3 Rev 102-116   8606..8650    
TEKLWVTVYYGVPVWKEATT 7E2/4 gp160 31-50 gp120(31-50) 6315..6374 B mouse
GVPVWKEATT 4D4#85 gp160 41-50 gp120(41-50) 6345..6374 B mouse, rat
VPVWKEATTTLFCASDAKAY M86 gp160 42-61 gp120(42-61) 6348..6407 B mouse
LFCASDAKAYDTEVHNVWAT polyclonal gp160 52-71 gp120(52-71) 6378..6437 B mouse
YDTEVHNVWA 133/237 gp160 61-70 gp120(61-70) 6405..6434 B mouse
EVHNVWATHACVPTD 133/11 gp160 64-78 gp120(64-78) 6414..6458   mouse
ACVPTDPNPQ D/3G5 gp160 73-82 gp120(73-82) 6441..6470 B mouse
ACVPTDPNPQEVVLVNVTEN D/5E12 gp160 73-92 gp120(73-92) 6441..6500 B mouse
PNPQEVVLVNVTENF L5.1 gp160 79-93 gp120(79-93) 6459..6503   mouse
PQEVVLVNVT 4A7C6 gp160 81-90 gp120(81-90) 6465..6494 B mouse
PQEVVLVNVTENFDMWKNDM 1D10 gp160 81-100 gp120(81-100) 6465..6524 B rat
EVVLVNVTEN B242 gp160 83-92 gp120(83-92) 6471..6500 B mouse
VNVTENFNMWKNNMV ID6 gp160 87-101 gp120(87-101) 6483..6527 B mouse
ENFDMWKNDM 133/192 gp160 91-100 gp120(91-100) 6495..6524 B mouse
NFNMWKNDM GV4D3 gp160 92-100 gp120(92-100) 6498..6524   mouse
FNMW B27 gp160 93-96 gp120(93-96) 6501..6512 B mouse
FNMWKN B35 gp160 93-98 gp120(93-98) 6501..6518   mouse
FNMWKNDMV D/4B5 gp160 93-101 gp120(93-101) 6501..6527 B mouse
VEQMHEDIIS B18 gp160 101-110 gp120(101-110) 6525..6554 B mouse
VEQMHEDIISLWDQSLKPCV 187.2.1 gp160 101-120 gp120(101-120) 6525..6584 B mouse, rat
EQMHEDIISLWDQSLKPCVK 11/65 gp160 102-121 gp120(102-121) 6528..6587 B mouse, rat
HEDIISLWD GV1A8 gp160 105-113 gp120(105-113) 6537..6563   mouse
EDIISLW CA13 gp160 106-112 gp120(106-112) 6540..6560 A mouse
LWDQSLKPCV 11 gp160 111-120 gp120(111-120) 6555..6584 B mouse
LTPLCVSLKCTDLKNDTNTN 6D5 gp160 122-141 gp120(122-141) 6588..6647 B mouse
TPLCVSLKCTDLGNATNTNS B33 gp160 123-142 gp120(123-142) 6591..6650 B mouse
CTDLKNDTNTNSSSGRMMMEK polyclonal gp160 131-151 gp120(131-151) 6615..6677   human
NTKSSNWKEMDGEIK 35D10/D2 gp160 139-155 gp120(139-155) 6639..6689   transgenic mouse
SSNWKE P1H6 gp160 143-148 gp120(143-148) 6651..6668 B mouse
WKEM(D/N)R P3B2 gp160 146-151 gp120(146-151) 6660..6677 B mouse
ISTSIRGKVQKEYAFFYKLD 697-D gp160 161-180 gp120(161-180) 6705..6764   human
STSIRGKV 6C4/S gp160 162-169 gp120(162-169) 6708..6731 B chimpanzee
STSIRGKVQ 10/76b gp160 162-170 gp120(162-170) 6708..6734   rat
TTSIRDKVQKEYALFYK 8.22.2 gp160 162-178 gp120(162-178) 6708..6758   transgenic mouse
STSIRGKVQKEYAFFYKLDI 12b gp160 162-181 gp120(162-181) 6708..6767   rat
KSIRGP HGI95 gp160 163-168 gp120(163-168) 6711..6728 AG human
KKKVHALFYKLDIV CH58 gp160 169-182 gp120(169-182) 6729..6770   human
QKEYAFFYKLD G3-136 gp160 170-180 gp120(170-180) 6732..6764   mouse
KEYAFFYKLD BAT085 gp160 171-180 gp120(171-180) 6735..6764   mouse
TVYALFYRLDIVP HGP68 gp160 171-183 gp120(171-183) 6735..6773 A human
EYAFFYKLDI 60b gp160 172-181 gp120(172-181) 6738..6767 B rat
EYAFFYKLDIIPIDNDTTSY 38/12b gp160 172-191 gp120(172-191) 6738..6797 B rat
FYKLDIVPIDNTTTSYRLISC polyclonal gp160 176-196 gp120(176-196) 6750..6812   human
EPIPIHYCAPA 322-151 gp160 211-221 gp120(211-221) 6855..6887 B mouse
EPIPIHYCAPAGFAILKCNN 493-156 gp160 211-230 gp120(211-230) 6855..6914 B mouse
PIPIHYCAPA 110.1 gp160 212-221 gp120(212-221) 6858..6887   human
APAGFAIL GV4H3 gp160 219-226 gp120(219-226) 6879..6902   mouse
GFAILKCNNK J1 gp160 222-231 gp120(222-231) 6888..6917 B mouse
KGSCKNVSTV 1006-30-D gp160 236-245 gp120(236-245) 6930..6959   human
RPVVSTQLLL 213.1 gp160 252-261 gp120(252-261) 6978..7007 B mouse
RPVVSTQLLLNGSLAEEEVV B12 gp160 252-271 gp120(252-271) 6978..7037 B mouse
TQLLLN B21 gp160 257-262 gp120(257-262) 6993..7010   mouse
TQLLLNG B26 gp160 257-263 gp120(257-263) 6993..7013   mouse
NGSLAEEEVVIRSVNFTDNA 110.E gp160 262-281 gp120(262-281) 7008..7067 B mouse
VIRSVNFTDN 110.C gp160 271-280 gp120(271-280) 7035..7064 B mouse
SVEINCTRPNNNTRKSI IIIB-V3-26 gp160 291-307 gp120(291-307) 7095..7145   mouse
INCTRP IIIB-V3-21 gp160 294-299 gp120(294-299) 7104..7121   mouse
CTRPNYNKRKHIGPGRAF 168B8 gp160 296-317 gp120(296-317) 7110..7175 B humanized mouse
PNNNTRKSIR MO97/V3 gp160 299-308 gp120(299-308) 7119..7148   human
NNNTRKRIRIQRGPGR? 55/1l gp160 300-315 gp120(300-315) 7122..7169    
NNNTRKRIRIQRGPGR 8/38c gp160 300-315 gp120(300-315) 7122..7169   rat
NYNKRKRIHIGPGRAFYTTK polyclonal gp160 300-321 gp120(300-321) 7122..7187   human
NNTRKSIRIQRG 9284 gp160 301-312 gp120(301-312) 7125..7160 B mouse
NTRKSIHIGPGRAF polyclonal gp160 302-317 gp120(302-317) 7128..7175 B human
NTRTSINIGPGQVFY CH23 gp160 302-318 gp120(302-318) 7128..7178 AE, B human
NTRTSINIGRGQVFY CH423 gp160 302-318 gp120(302-318) 7128..7178 B, CRF01_AE human
NTRKSIHIGPGRAFY polyclonal gp160 302-318 gp120(302-318) 7128..7178   human
NTRKSIRIQRGPGRAFVTIG MAG 109 gp160 302-321 gp120(302-321) 7128..7187   mouse
TRTSV 1334-D gp160 303-307 gp120(303-307) 7131..7145 CRF01_AE human
TRTSVR 1324-E gp160 303-308 gp120(303-308) 7131..7148 CRF01_AE human
CKRKIHIGPGQAFYT polyclonal gp160 303-319 gp120(303-319) 7131..7181 C mouse
CRRSVRIGPGQTFYATC HR10 gp160 303-321 gp120(303-321) 7131..7187 AG human
RKSIR MO99/V3 gp160 304-308 gp120(304-308) 7134..7148   human
RKRIHIGP C311E gp160 304-313 gp120(304-313) 7134..7163   chimpanzee
RKSIRIQRGPG 907 gp160 304-314 gp120(304-314) 7134..7166   mouse
RRSVRIGPGQTF HGN194 gp160 304-317 gp120(304-317) 7134..7175 AG human
KKGIAIGPGRTLY polyclonal gp160 304-318 gp120(304-318) 7134..7178    
RKSIRIQRGPGRAFV polyclonal gp160 304-318 gp120(304-318) 7134..7178 B human
RKRIHIGPGRAFYTT 10F10 gp160 304-320 gp120(304-320) 7134..7184 A, AE, B, F human, mouse
RKRIRIQRGPGRAFVTIGK? CGP 47 439 gp160 304-322 gp120(304-322) 7134..7190   human
RKRIHIGPGRAFYTTKN polyclonal gp160 304-322 gp120(304-322) 7134..7190 multiple human
CKSITIGPGRAFYATGDC P3C5 gp160 304-323 gp120(304-323) 7134..7193 B mouse
KSiRI 178.1 gp160 305-309 gp120(305-309) 7137..7151   mouse
KRIHI 257-D gp160 305-309 gp120(305-309) 7137..7151 B human
KRIHIGP 311-11-D gp160 305-313 gp120(305-313) 7137..7163 B human
KRIHIGPGRAFY 391/95-D gp160 305-318 gp120(305-318) 7137..7178 B human
RSVRIGPGQTFY HZ74 gp160 305-318 gp120(305-318) 7137..7178 AG human
KSITIGPGRAFHAI Aw gp160 305-320 gp120(305-320) 7137..7184   rat
KRIHIGPGRAFYTT DO142-10 gp160 305-320 gp120(305-320) 7137..7184   human
KSITIGSGRAFHAI Dv gp160 305-320 gp120(305-320) 7137..7184   rat
KSITIGPGRAFYATGD polyclonal gp160 305-322 gp120(305-322) 7137..7190   macaque, rabbit
RIHIG 50.1 gp160 306-310 gp120(306-310) 7140..7154   mouse
RIRIQRGPGRAFVTIGK BAT123 gp160 306-322 gp120(306-322) 7140..7190 B mouse
RIRPGRAFVTIGK   gp160 306-322 gp120(306-322) 7140..7190 B human
KSITK 838-D gp160 307-311 gp120(307-311) 7143..7157 B human
KSITKG 1006-15D gp160 307-312 gp120(307-312) 7143..7160 B human
KSITKGP 1027-15D gp160 307-313 gp120(307-313) 7143..7163 B human
IRIQRGPGR V3-13 gp160 307-315 gp120(307-315) 7143..7169    
VRIGPGQTFY HGA9 gp160 307-318 gp120(307-318) 7143..7178   human
IRIQRGPGRAFVT F19.26-4 gp160 307-319 gp120(307-319) 7143..7181 B mouse
IRIQRGPGRAFVTI 13105100 gp160 307-320 gp120(307-320) 7143..7184 B human, mouse
IRIQRGPGRAFVTIG polyclonal gp160 307-321 gp120(307-321) 7143..7187 B chimpanzee
SIHIGPGRAF SP.BAL114 gp160 308-317 gp120(308-317) 7146..7175   mouse
SIYIGPGRAF SP.SF2:104 gp160 308-317 gp120(308-317) 7146..7175    
RIHIGPGRAFYT polyclonal gp160 308-319 gp120(308-319) 7146..7181 B human
SISGPGRAFYTG loop 2 gp160 308-321 gp120(308-321) 7146..7187   human
RIQRGPGRAFVTGK 4G10 gp160 308-322 gp120(308-322) 7146..7190 B mouse
RIQRGPGRAFVTIGK G3-523 gp160 308-322 gp120(308-322) 7146..7190   mouse
RIHIGPGRAFYTTKN MN215 gp160 308-322 gp120(308-322) 7146..7190   human
RIQRGPGRAFVTIGKI Nea 9301 gp160 308-323 gp120(308-323) 7146..7193   mouse
IXIGPGR 4117C gp160 309-315 gp120(309-315) 7149..7169 B human
IHIGPGR 419-D gp160 309-315 gp120(309-315) 7149..7169 B human
IYIGPGR 83.1 gp160 309-315 gp120(309-315) 7149..7169   mouse
IQRGPGra 5023B gp160 309-316 gp120(309-316) 7149..7172   mouse
IxxGPGRA F58/D1 gp160 309-316 gp120(309-316) 7149..7172   mouse
IQRGPGRAF IIIB-13 V3 gp160 309-317 gp120(309-317) 7149..7175   mouse
IQRGPGRAFV A47/B1 gp160 309-318 gp120(309-318) 7149..7178   mouse
IHIGPGRAFYT μ5.5 gp160 309-319 gp120(309-319) 7149..7181   mouse
-I----G--FY-T 19b gp160 309-320 gp120(309-320) 7149..7184   human
HIGPGR 268-D gp160 310-315 gp120(310-315) 7152..7169 B human
QrGPGR 5042A gp160 310-315 gp120(310-315) 7152..7169   mouse
QRGPGr 5042B gp160 310-315 gp120(310-315) 7152..7169   mouse
HIGPGRA 418-D gp160 310-316 gp120(310-316) 7152..7172 B human
QrGPGRa 5021 gp160 310-316 gp120(310-316) 7152..7172   mouse
QRGPGra 5025B gp160 310-316 gp120(310-316) 7152..7172   mouse
QRGPGRA 5042 gp160 310-316 gp120(310-316) 7152..7172   mouse
QRGPGRAF 110.3 gp160 310-317 gp120(310-317) 7152..7175   mouse
HIGPGRAF 58.2 gp160 310-317 gp120(310-317) 7152..7175   mouse
QRGPGRAFV? polyclonal gp160 310-318 gp120(310-318) 7152..7178   mouse
IGPGR 537-D gp160 311-315 gp120(311-315) 7155..7169 B human, humanized mouse
RGPGRA 5020 gp160 311-316 gp120(311-316) 7155..7172   mouse
IGPGRA RC25 gp160 311-316 gp120(311-316) 7155..7172 B humanized mouse
RgPGRAF 5023A gp160 311-317 gp120(311-317) 7155..7175   mouse
IGPGRAF P3E1 gp160 311-317 gp120(311-317) 7155..7175 B mouse
RGPGRAFV 110.6 gp160 311-318 gp120(311-318) 7155..7178   mouse
IGPGQTFY HGA13 gp160 311-318 gp120(311-318) 7155..7178   human
IGPGRAFY polyclonal gp160 311-318 gp120(311-318) 7155..7178   mouse
IGPGQTFYA HGA49 gp160 311-319 gp120(311-319) 7155..7181   human
RGPGRAFVTIG 10/36e gp160 311-321 gp120(311-321) 7155..7187   rat
IGPGRAFYTTKN polyclonal gp160 311-322 gp120(311-322) 7155..7190   guinea pig
RGPGRAFVTIGKIG 0.5β gp160 311-324 gp120(311-324) 7155..7196 B humanized mouse, mouse
GPGR 447-52D gp160 312-315 gp120(312-315) 7158..7169 B human, mouse
GPGRAF 1026 gp160 312-317 gp120(312-317) 7158..7175   mouse, rabbit
GPGRAFY 10E3 gp160 312-318 gp120(312-318) 7158..7178 A, B, C, D, F, G, O, multiple human, mouse, rabbit
GPGRAFVTI N11-20 gp160 312-320 gp120(312-320) 7158..7184   mouse
pgRAF 5025A gp160 313-317 gp120(313-317) 7161..7175   mouse
PGRAFVTIGKIG 902 gp160 313-324 gp120(313-324) 7161..7196   mouse
GRAF 694/98-D gp160 314-317 gp120(314-317) 7164..7175 B human
RAF 9205 gp160 315-317 gp120(315-317) 7167..7175   mouse
AFVTIGK 110.I gp160 316-322 gp120(316-322) 7170..7190   mouse
FHSQ + WCR anti-HIV-2 polyclonal gp160 317-320,330-332 gp120(317-320)+gp120(330-332) 7173..7184, 7212..7220 HIV-2 guinea pig
HYQ B2C gp160 319-321 gp120(319-321) 7179..7187 HIV-2 mouse
IGKIGNMRQ IIIB-V3-01 gp160 320-328 gp120(320-328) 7182..7208   mouse
RNISFKA 2H1B gp160 357-362 gp120(357-362) 7293..7310 HIV-2 mouse
IFKQSSGGDPEIVTHSFNCGG 4D7/4 gp160 360-380 gp120(360-380) 7302..7364 B mouse
FKQSSGGDPEIVTHSFNCGGE 36.1(ARP 329) gp160 361-381 gp120(361-381) 7305..7367 B mouse
APGK 2F19C gp160 363-365 gp120(363-365) 7311..7319 HIV-2 mouse
GEFFYCNSTQLFNS 110.D gp160 380-393 gp120(380-393) 7362..7403 B mouse
TWFNSTWS 2D7 gp160 394-401 gp120(394-401) 7404..7427   mouse
WFNSTW B15 gp160 395-400 gp120(395-400) 7407..7424   mouse
RIKQIINMWQEVGKAMYAPPI 2D3 gp160 419-439 gp120(419-439) 7479..7541   mouse
IKQI E51 gp160 420-423 gp120(420-423) 7482..7493 B human
KQIINMWQEVGKAMYA JL413 gp160 421-436 gp120(421-436) 7485..7532 B human
QFINMWQEVK 5C2E5 gp160 422-431 gp120(422-431) 7488..7517   mouse
IINMWQKVGKAMYAP G3-211 gp160 423-437 gp120(423-437) 7491..7535   mouse
NMWQEVGKAMYA polyclonal gp160 425-436 gp120(425-436) 7497..7532   mouse
NMWQEVGKAMYAPPISG 1795 gp160 425-441 gp120(425-441) 7497..7547    
MWQEVGKAMYAPPIEG 11A8 gp160 426-441 gp120(426-441) 7500..7547   mouse
EVGKAMYAPP G3-299 gp160 429-438 gp120(429-438) 7509..7538   mouse, rat
EVGKAMYAPPISGQI MO86/C3 gp160 429-443 gp120(429-443) 7509..7553   human
GKAMYAPPIS 13H8 gp160 431-440 gp120(431-440) 7515..7544   mouse
KAMYAPPISGQIRCSSNITG polyclonal gp160 432-451 gp120(432-451) 7518..7577 B mouse
AMYAPPI 1662 gp160 433-439 gp120(433-439) 7521..7541    
AMYAPPISGQ 1794 gp160 433-442 gp120(433-442) 7521..7550    
LTRDGGNNNNESEIFRPGGGD polyclonal gp160 454-474 gp120(454-474) 7584..7646   human
NNNNGSEI polyclonal gp160 460-467 gp120(460-467) 7602..7625 B human
SNNESEIFRL CRA1 gp160 461-470 gp120(461-470) 7605..7634 B mouse, rat
GGGDMRDNWRSE 9201 gp160 471-482 gp120(471-482) 7635..7670 B mouse
GGGDMRDNWRSELYKYKVVK 1C1 gp160 471-490 gp120(471-490) 7635..7694 B mouse
GGDMRD H11 gp160 472-477 gp120(472-477) 7638..7655 B mouse
GGDMRDNWRSELYKYKVVKI W2 gp160 472-491 gp120(472-491) 7638..7697 B mouse
KYKVVKEIPLGVAPTKAKRR M38 gp160 485-504 gp120(485-504) 7677..7736   mouse
IEPLGVAPTK 110.1 gp160 491-500 gp120(491-500) 7695..7724 B human, mouse
EPLGVAP Chim 1 gp160 492-498 gp120(492-498) 7698..7718 B humanized chimpanzee
KPFSVAPTP 105-306 gp160 492-500 gp120(492-500) 7698..7724 O mouse
LGVAPT GV1G2 gp160 494-499 gp120(494-499) 7704..7721   mouse
APTKAKR 803.15.6 gp160 497-503 gp120(497-503) 7713..7733    
PTKAKRR 450-D gp160 498-504 gp120(498-504) 7716..7736 B human
TKAKRRVVQREKR 158F3 gp160 499-511 gp120(499-511) 7719..7757 B humanized mouse
RRVVQRE 722-D gp160 503-509 gp120(503-509) 7731..7751   human, mouse
dwVVQREKR 1331A gp160 503-511 gp120(503-511) 7731..7757   human
RRVVQREKR polyclonal gp160 503-511 gp120(503-511) 7731..7757   human
VVQREKR 1131-A gp160 505-511 gp120(505-511) 7737..7757 B human
AAGSTMGAASMTLTVQARQ 1A1 gp160 525-543 gp41(14-32) 7797..7853 B human
ASVTLTVQARLLLSGIVQQQ 1G12 gp160 533-552 gp41(22-41) 7821..7880 C mouse
AQQHLLQLTVWGIKQLQARIL α(566-586) gp160 561-581 gp41(50-70) 7905..7967   human
QQHLLQLTVWGIKQL HK20 gp160 562-576 gp41(51-65) 7908..7952 AG human
GIKQLQARILAVERYLKDQQ PC5009 gp160 572-591 gp41(61-80) 7938..7997   human, mouse
LQARILAVERYLKDQQL polyclonal gp160 576-592 gp41(65-81) 7950..8000   human
QARILAV   gp160 577-583 gp41(66-72) 7953..7973 B human, mouse
RILAVERYLKD polyclonal gp160 579-589 gp41(68-78) 7959..7991   mouse, rabbit
RILAVERYLKDQQLLGIWGCS polyclonal gp160 579-599 gp41(68-88) 7959..8021 B human, rabbit
ILAVERYLKDQQLLGIWG polyclonal gp160 580-597 gp41(69-86) 7962..8015   human
AVERYLKD polyclonal gp160 582-589 gp41(71-78) 7968..7991   human
AVERYLKDQQL anti-P1 gp160 582-592 gp41(71-81) 7968..8000 B  
ERYLKDQLLGIWGCSGKLIC polyclonal gp160 584-604 gp41(73-93) 7974..8036   human
DQQLLGIWGCSG 2F11 gp160 589-600 gp41(78-89) 7989..8024 B human
QQLLGIWG 246-D gp160 590-597 gp41(79-86) 7992..8015 B human
QQLLGIWGCSGKLICTTA polyclonal gp160 590-607 gp41(79-96) 7992..8045 B, CRF01_AE human
QLLG 9G5A gp160 591-594 gp41(80-83) 7995..8006   mouse
qLLGIWg 181-D gp160 591-597 gp41(80-86) 7995..8015 B human
LLGIWGCSG 240-D gp160 592-600 gp41(81-89) 7998..8024 B human
LLGIWGCSGKLIC HGK129 gp160 592-604 gp41(81-93) 7998..8036 AG human
LLGIWGCSGKLICTT F240 gp160 592-606 gp41(81-95) 7998..8042   human
LLGIWGCSGKLICTTAV D49 gp160 592-608 gp41(81-97) 7998..8048 B mouse
LGLIWGCSGKLIC 115.8 gp160 593-604 gp41(82-93) 8001..8036   mouse
LGIWGCSGKLIC M-1 gp160 593-604 gp41(82-93) 8001..8036   mouse
GIWGCSGK polyclonal α598-609 gp160 594-601 gp41(83-90) 8004..8027   human
GIWGCSGKLIC 1B8.env gp160 594-604 gp41(83-93) 8004..8036 B human
GIWGCSGKLICTTAVP polyclonal gp160 594-609 gp41(83-98) 8004..8051   human
IWGCSGKLICTTA polyclonal gp160 595-607 gp41(84-96) 8007..8045 B human
GCSGKLICTT clone 3 gp160 597-606 gp41(86-95) 8013..8042 B human
CSGKLIC 4 gp160 598-604 gp41(87-93) 8016..8036   human, mouse, rat
SGKLIC HGN35 gp160 599-604 gp41(88-93) 8019..8036 AG human
KGRLICYT 105-732 gp160 599-606 gp41(88-95) 8019..8042   mouse
SGKLICTTAVPWNAS 3D6 gp160 599-613 gp41(88-102) 8019..8063   human
GKLICTTAVPW P1G9 gp160 600-610 gp41(89-99) 8022..8054 B mouse
CTTAVPWNASWS? F172-D8 gp160 604-615 gp41(93-104) 8034..8069   human
NNMTWMEWEREREIGNY P2D2 gp160 624-638 gp41(113-127) 8094..8138 B mouse
TNLIYTLIEESQN HGF24 gp160 639-651 gp41(128-140) 8139..8177 D human
SLIEESQNQQEKNEQELLEL 120-16 gp160 644-663 gp41(133-152) 8154..8213 B human
ELLELDKWASLW polyclonal gp160 659-670 gp41(148-159) 8199..8234 B guinea pig
ELDEWA 14D9 gp160 662-667 gp41(151-156) 8208..8225 B, CRF01_AE, O mouse
ELDKWA 18F11 gp160 662-667 gp41(151-156) 8208..8225 B goat, guinea pig, human, mouse, rabbit
ELNKWA TH-Ab1 gp160 662-667 gp41(151-156) 8208..8225   rabbit
LDKW m66 gp160 663-666 gp41(152-155) 8211..8222   human
WASLWNWFDITN Z13e1 gp160 666-677 gp41(155-166) 8220..8255 B human
NWFDIT 4E10 gp160 671-676 gp41(160-165) 8235..8252 B human
NWFDISNWLWYIK 10E8 gp160 671-683 gp41(160-172) 8235..8273 B human
HLPIPRGPDRPEGIE B30 gp160 720-734 gp41(209-223) 8382..8426   mouse
RPPVPRGPDRPEGIEEEGGE 60.1.1 gp160 721-740 gp41(210-229) 8385..8444   mouse
RGPDRPEGIEEEGGERDRDRS 41S-2 gp160 725-745 gp41(214-234) 8397..8459   mouse
PDRPEG C8 gp160 727-732 gp41(216-221) 8403..8420 B mouse
PDRPEGIE B31 gp160 727-734 gp41(216-223) 8403..8426   mouse
DRPEGIEEEGGERDRDRS 1575 gp160 728-745 gp41(217-234) 8406..8459   mouse
GIEEEGGERDRDRSIR 88-158/02 gp160 732-747 gp41(221-236) 8418..8465   mouse
IEEE polyclonal gp160 733-736 gp41(222-225) 8421..8432   mouse
IEEEGGERD B8 gp160 733-741 gp41(222-230) 8421..8447   mouse
GERDRDR SAR1 gp160 738-744 gp41(227-233) 8436..8456 B mouse
ERDRD 1577 gp160 739-743 gp41(228-232) 8439..8453 B mouse
SVIGWLTVRERMRRAE polyclonal Nef 9-24   8821..8868   mouse
VGWPTVRERM 13/042 Nef 11-20   8827..8856   mouse
TVRERMRRAE 13/035 Nef 15-24   8839..8868   mouse
ERMRRAEPA? A6 Nef 18-26   8848..8874   mouse
DGVGAVSRDLEKHGAITS? A7 Nef 28-45   8878..8931 B mouse
VGAASRDLEKHGAI 25/03 Nef 30-43   8884..8925   mouse
GAASRDLEKH 3F2 Nef 31-40   8887..8916   mouse
GAASRDLEKHGAITSSNTAA 3D12 Nef 31-50   8887..8946   mouse
AATNAACAWLEAQEEE polyclonal Nef 49-64   8941..8988   mouse
TNAACAWLEAQEEEEVGFPVT 3G12 Nef 51-71   8947..9009   mouse
AQEEEEVGFPVTPQ 13/058 Nef 60-73   8974..9015   mouse
QEEEEVGFPVT polyclonal Nef 61-71   8977..9009   rabbit
AAVDLS F14.11 Nef 83-88   9043..9060   mouse
AAVDLSHFLKEKGGLEGLIHS 31/03 Nef 83-103   9043..9105   mouse
FLKEKGGLE polyclonal Nef 90-98   9064..9090   human, rabbit
YHTQGYFPDWQN? F4 Nef 115-126   9139..9174   mouse
QGYFPDWQNYTPGPGV polyclonal Nef 118-133   9148..9195   mouse
TPGPGVRYPL? F3 Nef 128-137   9178..9207 B mouse
FKLVPVSEAE polyclonal Nef 143-151   9223..9249   rabbit
VEPDKVEEAN F1 Nef 148-157   9238..9267   mouse
DKVEEANKGENTSLLHPVSL 2F2 Nef 151-170   9247..9306   mouse
NTSLLHPVSLHGMDDPEREV 3E6 Nef 161-180   9277..9336   mouse
LHGMDDPEREVL? E5 Nef 170-181   9304..9339   mouse
HGMDDPEREVLEWRFDSRLA 2A3 Nef 171-190   9307..9366   mouse
DSRLAFHHVARELHPEYFKNC polyclonal Nef 186-206   9352..9414 B mouse
HHVARELHPEYFKNC E7 Nef 192-206   9370..9414   mouse
VARELHPEYFKNC AE6 Nef 194-206   9376..9414 B mouse
MARELHPEYYKDC EH1 Nef 194-206   9376..9414   mouse
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