HIV molecular immunology database

 

Peptide Data

This table shows the peptide data, sorted by HXB2 location. The table also lists the peptides' locations relative to the C clade reference sequence, the number of subject reactions, and number of subjects screened against for each peptide.

The data are also available in a comma-separated value (CSV) file for import to your favorite spreadsheet.

PeptideSequenceProteinHXB2 locRef locReactionsScreens
1 MGARASILRGGKLDKWEK p17 1 18 1 18 2 309
2 RGGKLDKWEKIRLRPGGK p17 9 26 9 26 2 309
3 EKIRLRPGGKKHYMLKHL p17 17 34 17 34 44 309
4 GKKHYMLKHLVWASREL p17 25 41 25 41 23 309
5 KHLWASRELERFAL p17 32 46 32 46 7 309
6 ASRELERFALNPGLL p17 37 51 37 51 8 309
7 ERFALNPGLLETSEGCK p17 42 58 42 58 6 309
8 GLLETSEGCKQIMKQL p17 49 64 49 64 0 309
9 EGCKQIMKQLQPALQTGT p17 55 72 55 72 4 309
10 QLQPALQTGTEELRSLY p17 63 79 63 79 10 309
11 TGTEELRSLYNTVATLY p17 70 86 70 86 45 309
12 SLYNTVATLYCVHAGIEV p17 77 94 77 94 3 309
13 LYCVHAGIEVRDTKEAL p17 85 101 85 101 3 309
14 IEVRDTKEALDKIEEEQNK p17 92 110 92 110 0 309
15 LDKIEEEQNKSQQKTQQA p17 101 118 101 118 2 309
16 NKSQQKTQQKAAADKGKV p17 109 125 109 126 2 309
17 KAAADKGKVSQNYPIV p17-p24 117 3 118 3 7 309
18 GKVSQNYPIVQNLQGQMV p17-p24 126 11 124 11 4 309
19 IVQNLQGQMVHQAISPR p24 2 18 2 18 10 309
20 QMVHQAISPRTLNAWVKV p24 9 26 9 26 33 309
21 PRTLNAWVKVIEEKAF p24 17 32 17 32 20 309
22 WVKVIEEKAFSPEVIPMF p24 23 40 23 40 34 309
23 AFSPEVIPMFSALSEGA p24 31 47 31 47 11 309
24 PMFTALSEGATPQDLNTM p24 38 55 38 55 11 309
25 GATPQDLNTMLNTVGGH p24 46 62 46 62 139 309
26 NTMLNTVGGHQAAMQMLK p24 53 70 53 70 4 309
27 GGHQAAMQMLKDTINEEA p24 60 77 60 77 22 309
28 LKDTINEEAAEWDRLHPV p24 69 86 69 86 18 309
29 AAEWDRLHPVHAGPIA p24 77 92 77 92 9 309
30 LHPVHAGPIAPGQMREPR p24 83 100 83 100 6 309
31 IAPGQMREPRGSDIA p24 91 105 91 105 2 309
32 MREPRGSDIAGTTSTL p24 96 111 96 111 0 309
33 SDIAGTTSTLQEQIAWM p24 102 118 102 118 22 309
34 STLQEQIAWMTSNPPVPV p24 109 126 109 126 12 309
35 WMTSNPPVPVGDIYKRWI p24 117 134 117 134 13 309
36 PVGDIYKRWIILGLNKIV p24 125 142 125 142 26 309
37 WIILGLNKIVRMYSPTSI p24 133 150 133 150 14 309
38 IVRMYSPVSILDIKQGPK p24 141 158 141 158 1 309
39 SILDIKQGPKEPFRDYV p24 149 165 149 165 2 309
40 GPKEPFRDYVDRFFKTLR p24 156 173 156 173 58 309
41 YVDRFFKTLRAEQATQDV p24 164 181 164 181 45 309
42 LRAEQATQDVKNWMTDTL p24 172 189 172 189 17 309
43 EVKNWMTETLLVQNA p24 180 194 180 194 3 309
44 MTETLLVQNANPDCKTIL p24 185 202 185 202 6 309
45 NANPDCKTILRALGPGA p24 193 209 193 209 9 309
46 TILRALGPGASLEEMMTA p24 200 217 200 217 7 309
47 GASLEEMMTACQGVGGPSH p24 208 226 208 226 5 309
48 ACQGVGGPSHKARVLAEA p24-p2p7p1p6 217 3 217 3 8 309
49 SHKARVLAEAMSQANSA p24-p2p7p1p6 225 11 225 10 0 309
50 AEAMSQANSAIMMQR p2p7p1p6 1 17 1 15 0 309
51 QANSAIMMQRSNFKGPKR p2p7p1p6 7 25 6 23 2 309
52 QRSNFKGPKRIVKCF p2p7p1p6 16 30 14 28 3 309
53 KGPKRIVKCFNCGKEGHI p2p7p1p6 21 38 19 36 1 309
54 CFNCGKEGHIARNCRAPR p2p7p1p6 29 46 27 44 1 309
55 HIARNCRAPRKKGCWK p2p7p1p6 37 52 35 50 8 309
56 RAPRKKGCWKCGKEGHQM p2p7p1p6 43 60 41 58 0 309
57 WKCGKEGHQMKDCTERQA p2p7p1p6 51 68 49 66 0 309
58 QMKDCTERQANFLGKIW p2p7p1p6 59 75 57 73 2 309
59 RQANFLGKIWPSHKGR p2p7p1p6 66 81 64 79 8 309
60 GKIWPSHKGRPGNFLQSR p2p7p1p6 72 89 70 87 1 309
61 GRPGNFLQSRPEPTA p2p7p1p6 80 94 78 92 0 309
62 FLQSRPEPTAPPAESFRF p2p7p1p6 85 102 83 100 1 309
63 TAPPAESFRFEETTPAPK p2p7p1p6 93 112 91 108 1 309
64 RFEETTPAPKQEPKDREPL p2p7p1p6 103 123 99 117 0 309
65 PKQEPKDREPLTPSLK p2p7p1p6 111 127 107 121 6 309
66 KDREPLTSLKSLFGSDPLSQ p2p7p1p6 118 137 112 131 2 309
145 FFREDLAFPQGKAREF Pol 1 16 1 16 4 214
146 AFPQGEAREFPSEQTRA Pol 7 23 7 23 0 214
147 REFPSEQTRANSPTSREL Pol 14 31 14 31 0 214
148 RANSPTSRELQVRGDNPR Pol 22 40 22 39 0 214
149 ELQVRGDNPRSEAGAER Pol 30 48 30 46 1 214
150 NPRSEAGAERQGTLNF Pol 39 54 37 52 1 214
151 GAERQGTLNFPQITW Pol-Protease 45 6 43 6 0 214
152 TLNFPQITLWQRPLV Pol-Protease 53 11 49 11 0 214
153 QITLWQRPLVSIKVGGQI Protease 2 19 2 19 5 214
154 LVTIKIGGQLKEALL Protease 10 24 10 24 0 214
155 VGGQIKEALLDTGADDTV Protease 15 32 15 32 0 214
156 LLDTGADDTVLEEINL Protease 23 38 23 38 0 214
157 DDTVLEEMNLPGRWKPKM Protease 29 46 29 46 0 214
158 NLPGKWKPKMIGGIGGFI Protease 37 54 37 54 1 214
159 KMIGGIGGFIKVRQYDQI Protease 45 62 45 62 0 214
160 FIKVRQYDQIPIEICGKK Protease 53 70 53 70 0 214
161 QIPIECGKKAIGTVLV Protease 61 77 61 77 1 214
162 GKKAIGTVLVGPTPVNII Protease 68 85 68 85 7 214
163 LVGPTPVNIIGRNMLTQL Protease 76 93 76 93 23 214
164 IIGRNMLTQLGCTLNFPI Protease-RT 84 2 84 2 0 214
165 QLGCTLNFPISPIETVPV Protease-RT 92 10 92 10 0 214
166 PISPIETVPVKLKPGM RT 1 16 1 16 11 214
167 TVPVKLKPGMDGPKVKQW RT 7 24 7 24 0 214
168 GMDGPKVKQWPLTEEKIK RT 15 32 15 32 1 214
169 QWPLTEEKIKALTAI RT 23 37 23 37 1 214
170 EEKIKALTAICEEMEK RT 28 43 28 43 1 214
171 LTAICEEMEKEGKITKI RT 34 50 34 50 0 214
172 MEKEGKITKIGPENPY RT 41 56 41 56 0 214
173 ITKIGPENPYNTPVFAIK RT 47 64 47 64 0 214
174 PYNTPVFAIKKKDSTKWR RT 55 72 55 72 1 214
175 IKKKDSTKWRKLVDFREL RT 63 80 63 80 0 214
176 WRKLVDFRELNKRTQDFW RT 71 88 71 88 0 214
178 FWEVQLGIPHPAGLKKKK RT 87 104 87 104 3 214
179 PHPAGLKKKKSVTVLDV RT 95 111 95 111 1 214
180 KKKSVTVLDVGDAYFSV RT 102 118 102 118 8 214
181 LDVGDAYFSVPLDEDFRK RT 109 126 109 126 3 214
182 SVPLDEDFRKYTAFTI RT 117 132 117 132 1 214
183 DFRKYTAFTIPSINNETPGI RT 123 142 123 142 2 214
184 PSINNETPGIRYQYNVL RT 133 149 133 149 8 214
185 PGIRYQYNVLPQGWK RT 140 154 140 154 0 214
186 QYNVLPQGKGSPAIF RT 145 160 145 160 2 214
187 QGWKGSPAIFQSSMTKIL RT 151 168 151 168 10 214
188 IFQSSMTKILEPFRA RT 159 173 159 173 0 214
189 MTKILEPFAQNPEIVIY RT 164 181 164 181 2 214
190 RAQNPEIVIYQYMDDLYV RT 172 189 172 189 15 214
191 IYQYMDDLYVGSDLEI RT 180 195 180 195 0 214
192 DLYVGSDLEIGQHRAKI RT 186 202 186 202 0 214
193 LEIGQHRAKIEELREHLL RT 193 210 193 210 0 214
194 KIEELREHLLKWGFTTPDK RT 201 219 201 219 2 214
195 LKWGFTTPDKKHQKEPPF RT 210 227 210 227 2 214
196 DKKHQKEPPFLWMGYELH RT 218 235 218 235 3 214
197 PFLWMGYELHPDKWTV RT 226 241 226 241 0 214
198 YELHPDKWTVQPIQLPEK RT 232 249 232 249 0 214
199 TVQPIVLPEKDSWTVNDI RT 240 257 240 257 0 214
200 EKDSWTVNDIQKLVGKL RT 248 264 248 264 6 214
201 NDIQKLVGKLNWASQIY RT 255 271 255 271 3 214
202 SKLNWASQIYPGIKVRQL RT 262 279 262 279 7 214
203 IYPGIKVRQLCKLLRGAK RT 270 287 270 287 4 214
204 QLCKLLRGAKALTDVIPL RT 278 295 278 295 0 214
205 AKALTDIVPLTEEAELEL RT 286 303 286 303 0 214
206 PLTEEAELELAENREILK RT 294 311 294 311 1 214
207 ELAENREILKEPVHGVYY RT 302 319 302 319 5 214
208 LKEPVHGVYYDPSKDLIA RT 310 327 310 327 0 214
209 YYDPSKDLIAEIQKQGQGQW RT 318 337 318 337 0 214
210 EIQKQGHDQWTYQIY RT 328 342 328 342 0 214
211 GHDQWTYQIYQEPFKNLK RT 333 350 333 350 5 214
212 IYQEPFKNLKTGKYAKMR RT 341 358 341 358 8 214
213 LKTGKYAKMRTAHTNDVK RT 349 366 349 366 3 214
214 MRTAHTNDVKQLTEAVQK RT 357 374 357 374 0 214
215 VKQLTEAVQKIAMESIVI RT 365 382 365 382 3 214
216 QKIAMESIVIWGKTPKFR RT 373 390 373 390 6 214
217 VIWGKTPKFRLPIQKETW RT 381 398 381 398 2 214
218 FRLPIQKETWETWWTDYW RT 389 406 389 406 5 214
219 TWETWWTDYWQATWIPEW RT 397 414 397 414 5 214
220 YWQATWIPEWEFVNRPPL RT 405 422 405 422 4 214
221 EWEFVNRPPLVKLWYQL RT 413 429 413 429 3 214
222 PPLVKLWYQLEKEPIAGA RT 420 437 420 437 1 214
223 QLEKEPIAGAETFYVDGA RT 428 445 428 445 5 214
224 GAETFYVDGAANRETKI RT 436 452 436 452 21 214
225 DGAANRETKIGKAGYV RT 443 458 443 458 1 214
226 ETKIGKAGYVTDRGRQKI RT 449 466 449 466 4 214
227 YVTDRGRQKIVSLTETTNQK RT 457 476 457 476 0 214
228 VSLTETTNQKTELQAIQL RT 467 484 467 484 4 214
229 QKTELQAIQLALQDSGSEV RT 475 493 475 493 0 214
230 LALQDSGSEVNIVTDSQY RT 484 501 484 501 3 214
231 EVNIVTDSQYALGII RT 492 506 492 506 3 214
232 TDSQYALGIIQAQPDK RT 497 512 497 512 8 214
233 ALGIIQAQPDKSESEL RT 502 517 502 517 2 214
234 AQPDKSESELVNQIIEQL RT 508 525 508 525 0 214
235 ELVNQIIEQLIKKERVYL RT 516 533 516 533 0 214
236 QLIKKERVYLSWVPAWHK RT 524 540 524 540 3 214
237 VYLSWVPAHKGIGGNEQV RT 531 548 531 548 0 214
238 HKGIGGNEQVDKLVSSGI RT 539 556 539 556 0 214
239 QVDKLVSSGIRKVLFL RT-Integrase 547 2 547 2 0 214
240 SSGIRKVLFLDGIDKA RT-Integrase 553 8 553 8 0 214
241 VLFLDGIDKAQEEHEKYH RT-Integrase 559 16 559 16 0 214
242 KAQEEHEKYHSNWRAMA Integrase 7 23 7 23 3 214
243 KYHSNWRAMASEFNLPPI Integrase 14 31 14 31 0 214
244 MASEFNLPPIVAKEIVA Integrase 22 38 22 38 27 214
245 PPIVAKEIVASCDKCQLK Integrase 29 46 29 46 8 214
246 VASCDKCQLKGEAMHGQV Integrase 37 54 37 54 0 214
247 LKGEAMHGQVDCSPGIW Integrase 45 61 45 61 0 214
248 GQVDCSPGIWQLDCTHL Integrase 52 68 52 68 1 214
249 GIWQLDCTHLEGKIILVA Integrase 59 76 59 76 8 214
250 HLEGKIILVAVHVASGYI Integrase 67 84 67 84 0 214
251 VAVHVASGYIEAEVIPA Integrase 75 91 75 91 0 214
252 GYIEAEVIPAETGQETAY Integrase 82 99 82 99 4 214
253 PAETGQETAYFILKLAGR Integrase 90 107 90 107 5 214
254 AYFILKLAGRWPVKVIH Integrase 98 114 98 114 7 214
255 AGRWPVKVIHTDNGSNF Integrase 105 121 105 121 4 214
256 VIHTDNGSNFTSAAVKAA Integrase 112 129 112 129 1 214
257 NFTSAAVKAACWWAGI Integrase 120 135 120 135 1 214
258 VKAACWWAGIQQEFGIPY Integrase 126 143 126 143 10 214
259 GIQQEFGIPYNPQSQGVV Integrase 134 151 134 151 2 214
260 PYNPQSQGVVESMNKELK Integrase 142 159 142 159 0 214
261 VVESMNKELKKIIGQVR Integrase 150 166 150 166 2 214
262 ELKKIIGQVRDQAEHLK Integrase 157 173 157 173 17 214
263 QVRDQAEHLKTAVQMAVF Integrase 164 181 164 181 4 214
264 LKTAVQMAVFIHNFKRK Integrase 172 188 172 188 0 214
265 AVFIHNFKRKGGIGGYSA Integrase 179 196 179 196 24 214
266 RKGGIGGYSAGERIIDII Integrase 187 204 187 204 1 214
267 SAGERIIDIIATDIQTK Integrase 195 211 195 211 0 214
268 DIIATDIQTKELQKQIIK Integrase 202 219 202 219 0 214
269 TKELQKQIIKIQNFRVYY Integrase 210 227 210 227 5 214
270 IKIQNFRVYYRDSRDPIW Integrase 218 235 218 235 6 214
271 YYRDSRDPIWKGPAKLLW Integrase 226 243 226 243 0 214
272 IWKGPAKLLWKGEGAVVI Integrase 234 251 234 251 0 214
273 LWKGEGAVVIQDNSDIKV Integrase 242 259 242 259 1 214
274 VIQDNSDIKVVPRRKAKI Integrase 250 267 250 267 0 214
275 KVVPRRKAKIIKDYGKQM Integrase 258 275 258 275 30 214
276 KIIKDYGKQMAGADCVA Integrase 266 282 266 282 1 214
277 KQMAGADCVAGRQDED Integrase 273 288 273 288 2 214
402 MENRWQVLIVWQVDRMKI Vif 1 18 1 18 0 214
403 IVWQVDRMKIRTWNSLVK Vif 9 26 9 26 0 214
404 KIRTWNSLVKHHMYVSRR Vif 17 34 17 34 0 214
405 VKHHMYVSRRANGWFYRH Vif 25 42 25 42 0 214
406 RRANGWFYRHHYESRHPK Vif 33 50 33 50 0 214
407 RHHYESRHPKVSSEVHI Vif 41 57 41 57 19 214
408 HPKVSSEVHIPLGEARLV Vif 48 65 48 65 2 214
409 HIPLGEARLVIKTYWGL Vif 56 72 56 72 1 214
410 RLVIKTYWGLQTGERDWHL Vif 63 81 63 81 0 214
411 LQTGERDWHLGHGVSIEW Vif 72 89 72 89 32 214
412 HLGHGVSIEWRLRRY Vif 80 94 80 94 2 214
413 VSIEWRLRRYSTQVDPGL Vif 85 102 85 102 1 214
414 RYSTQVDPGLADQLIHMH Vif 93 110 93 110 1 214
415 GLADQLIHMHYFDCF Vif 101 115 101 115 1 214
416 LIHMHYFDCFADSAIRKA Vif 106 123 106 123 0 214
417 CFADSAIRKAILGHIV Vif 114 129 114 129 1 214
418 IRKAILGHIVIPRCDYQA Vif 120 137 120 137 0 214
419 IVIPRCDYQAGHNKVGSL Vif 128 145 128 145 0 214
420 QAGHNKVGSLQYLALTAL Vif 136 153 136 153 0 214
421 SLQYLALTALIKPKKIK Vif 144 160 144 160 0 214
422 TALIKPKKIKPPLPSVRK Vif 151 168 151 168 5 214
423 IKPPLPSVRKLVEDRWNK Vif 159 176 159 176 3 214
424 RKLVEDRWNKPQKTRGRR Vif 167 184 167 184 0 214
425 NKPQKTRGRRGNHTMNGH Vif 175 192 175 192 0 214
278 MEQAPEDQGPQREPYNEW Vpr 1 18 1 18 0 214
279 GPQREPYNEWTLELLEEL Vpr 9 26 9 26 2 214
280 EWTLELLEELKQEAVRHF Vpr 17 34 17 34 0 214
281 ELKQEAVRHFPRPWLHGL Vpr 25 42 25 42 39 214
282 HFPRPWHGLGQYIYETY Vpr 33 50 33 50 1 214
283 GLGQYIYETYGDTWTGV Vpr 41 57 41 57 7 214
284 ETYGDTWTGVEALIRIL Vpr 48 64 48 64 2 214
285 TGVEALIRILQQLFIHF Vpr 55 72 55 71 0 214
286 ILQQLFIHFRIGCQHSR Vpr 63 80 63 79 0 214
287 HFRIGCQHSRIGILRQRR Vpr 71 88 70 87 0 214
288 SRIGILRQRRARNGASRS Vpr 79 96 78 95 0 214
111 MEPVDPNLEPWNHPGSQPK Tat 1 19 1 19 5 309
112 PWNHPGSQPKTACNKCY Tat 10 26 10 26 0 309
113 QPKTACNKCYCKKCSYH Tat 17 33 17 33 0 309
114 KCYCKKCSYHCLVCFQTK Tat 24 41 24 41 1 309
115 YHCLVCFQTKGLGISYGR Tat 32 49 32 49 2 309
116 TKGLGISYGRKKRRQRRS Tat 40 57 40 57 2 309
117 GRKKRRQRRSAPPSSEDH Tat 48 65 48 65 0 309
118 RRAPQDSQTHQVSLSK Tat 56 71 56 71 0 309
119 HQNLISKQPLPRTQGDPT Tat 65 82 65 82 0 309
120 PLPRTQGDPTGSEESKK Tat 73 89 73 89 0 309
121 DPTGSEESKKKVESK Tat 80 94 80 94 0 309
122 EESKKKVESKTETDPFDQ Tat 85 101 85 102 1 309
94 MAGRSGDSDEALLQAVRI Rev 1 18 1 18 1 309
95 DEALLQAVRIIKILY Rev 9 23 9 23 4 309
96 QAVRIIKILYQSNPY Rev 14 28 14 28 11 309
97 IKILYQSNPYPEPEGTRQAR Rev 19 38 19 38 0 309
98 EPEGTRQARKNRRRW Rev 30 45 30 45 0 309
99 QARKNRRRRWRARQRQIH Rev 36 53 36 53 0 309
100 RWRARQRQIHSISERIL Rev 44 60 44 60 11 309
101 QIHSISERILSTCLGRPA Rev 51 68 51 68 6 309
102 ILSTCLGRPAEPVPLQL Rev 59 75 59 75 8 309
103 RPAEPVPLQLPPIERL Rev 66 81 66 81 2 309
104 PLQLPPIERLHLHIDCSES Rev 72 88 72 88 0 309
105 ERLHIDCSESGGTSGTQ Rev 79 95 79 95 0 309
106 SESGGTSGTQQSQGTTEGV Rev 86 104 86 104 0 309
107 QQSQGTTEGVGSP Rev 95 107 95 107 0 309
108 QILVESPAVLESGTKEE Rev 101 116 101 117 1 309
123 MLDLLAKVDYRLGVGALI Vpu 1 13 1 18 1 214
124 DYRLGVGALIVALIIAIV Vpu 4 21 9 26 0 214
125 LIVALIIAIVVWTIAYIEY Vpu 12 30 17 35 0 214
126 VVWTIAYIERKLLRQRKI Vpu 21 39 26 44 0 214
127 YRKLLRQRKIDWLIKRIR Vpu 30 47 35 52 5 214
128 KIDWLIKRIRERAEDSGNES Vpu 38 57 43 62 0 214
129 ERAEDSGNESEGDTEELSA Vpu 48 66 53 71 1 214
130 SEGDTEELSTMVDMGHL Vpu 57 74 62 78 0 214
131 STMVDMGHLRLLDVNDL Vpu 66 82 70 86 1 214
289 MRVMGIQRNCQQWWRW gp160 1 17 1 16 1 214
290 QRNCQQWWRWGILGFWML gp160 7 25 7 24 0 214
291 RWGILGFWMLMICNVM gp160 16 31 15 30 0 214
292 FWMLMICCNMGNLWVTVY gp160 22 39 21 38 1 214
293 VMGNLWVTVYYGVPVWK gp160 30 46 29 45 1 214
294 TVYYGVPVWKEAKTTTLF gp160 37 53 36 52 9 214
295 VWKEATTTLFCASDACAY gp160 44 61 43 60 0 214
296 FCASDACAYETEVHNVW gp160 53 69 52 68 3 214
297 AYETEVHNVWATHACV gp160 60 75 59 74 0 214
298 HNVWATHACVPTDPNPQEM gp160 66 84 65 83 0 214
299 VPTDPNPQEMVLENV gp160 75 89 74 88 3 214
300 NPQEVMLENVTENFNMWK gp160 80 97 79 96 0 214
301 NVTENFNMWKNNMVEQMH gp160 88 105 87 104 0 214
302 WKNDMVDQMHEDIISLW gp160 96 112 95 111 0 214
303 QMHEDIISLWDQSLKPCV gp160 103 120 102 119 1 214
304 LWDQSLKPCVKLTPLCV gp160 111 127 110 126 1 214
305 PCVKLTPLCVTLNCTNV gp160 118 134 117 133 0 214
306 LCVTLNCTNLVNTTNTNN gp160 125 142 124 141 0 214
307 NVNTTSNTNNSMGGEI gp160 133 148 132 147 0 214
308 NTNNSMGGEIKNCSF gp160 139 159 138 152 0 214
309 MGGEIKNCSFNITTELR gp160 150 166 143 159 0 214
310 CSFNITTELRDKKQVYA gp160 157 173 150 167 1 214
311 LRDKKQKYALFYRLDIV gp160 165 182 158 175 1 214
312 YALFYRLDIVPLNENNSSEY gp160 173 192 166 185 2 214
313 PLNENNSSEYRLINCNTSA gp160 182 200 176 194 0 214
314 YRLINCNTSAITQACPKV gp160 191 208 185 202 0 214
315 SAITQACPKVSFDPIPIH gp160 199 216 193 210 0 214
316 KVSFDPIPIHYCAPAGYA gp160 207 224 201 218 17 214
317 IHYCAPAGYAILKCNNKTF gp160 215 233 209 227 2 214
318 YAILKCNNKTFNGTGPCNNV gp160 223 242 217 236 0 214
319 FNGTGPGCNNVSTVQCTH gp160 233 249 227 243 0 214
320 NNVSTVQCTHGIKPVV gp160 240 255 234 249 0 214
321 QCTHGIKPVVSTQLLL gp160 246 261 240 255 1 214
322 KPVVSTQLLLNGSLA gp160 252 266 246 260 2 214
323 TQLLLNGSLAEEEIIIR gp160 257 273 251 267 0 214
324 SLAEEEIIIRSENLTNNA gp160 264 281 258 275 0 214
325 IRSENLTNNAKTIIVHL gp160 272 288 266 282 7? 214
326 NNAKTIIVHLNESVEI gp160 279 294 273 288 0 214
327 IVHLNESVEIVCTRPNNNTR gp160 285 304 279 298 0 214
328 VCTRPNNNTRKSIRI gp160 295 309 289 303 3 214
329 NNNTRKSIRIGPGQTFY gp160 300 318 294 310 1 214
330 IRIGPGQTFYATGDII gp160 307 324 301 316 2 214
331 QTFYATGDIIGDIRQAH gp160 315 330 307 323 0 214
332 DIIGDIRQAHCNISGTKW gp160 321 338 314 331 1 214
333 AHCNIGTKWETLKQRV gp160 329 346 322 338 0 214
334 TKWNETLQRVSKKLAEHF gp160 336 353 329 346 0 214
335 RVSKKLAEHFPNKTIKF gp160 344 361 337 353 1 214
336 EHFPNKTIKFAPSSGGDLEI gp160 351 371 344 363 1 214
337 PSSGGDLEITTHSF gp160 363 376 355 368 2 214
338 GDLEITTHSFNCRGEFFY gp160 367 384 359 376 2 214
339 SFNCRGEFFYCNTSKLF gp160 375 391 367 383 1 214
340 FFYCNTSKLFNSTYNSTS gp160 382 400 374 391 0 214
341 LFNSTYNSTSTSNSTI gp160 390 407 382 397 0 214
342 TSNSTITLPCRIKQI gp160 409 423 392 406 0 214
343 ITLPCRIKQIINMWQGV gp160 414 430 397 413 0 214
344 CRIKQIINMWQEVGKAMY gp160 418 435 401 418 0 214
345 MWQGVGRAMYAPPIAGNI gp160 426 443 409 426 0 214
346 MYAPPIAGNITCKSNI gp160 434 449 417 432 0 214
347 AGNITCKSNITGLLLTR gp160 440 456 423 439 2 214
348 SNITGLLLTRDGDTTTNT gp160 447 464 430 447 0 214
349 TRDGTTTNTTETFR gp160 455 469 438 452 0 214
350 TTTNTTETFRPGGGDMR gp160 460 476 443 459 0 214
351 TFRPGGGDMRRNWRSELY gp160 467 484 450 467 0 214
352 MRRNWRSELYKYKVVEI gp160 475 491 458 474 0 214
353 ELYKYKVVEIKPLGVA gp160 482 497 465 480 0 214
354 VVEIKPLGVAPTKAKRRV gp160 488 505 471 488 1 214
355 VAPTKAKRRVVEREKRAV gp160 496 513 479 496 1 214
356 RVVEREKRAVGIGAVFL gp160 504 520 487 503 0 214
357 RAVGIGAVFLGFLGAA gp160 511 526 494 509 1 214
358 AVFLGFLGAAGSTMGAA gp160 517 533 500 516 0 214
359 GAAGSTMGAASITLTVQA gp160 524 541 507 524 0 214
360 AASMTLTVQARQLLSGIV gp160 532 549 515 532 2 214
361 QARQLLSGIVQQQSNLLR gp160 540 557 523 540 1 214
362 IVQQQSNLLRAIEQQHM gp160 548 565 531 548 2 214
363 LRAIEQQHMQLTVWGI gp160 556 573 539 555 1 214
364 HMQLTVWGIKQLQTRVL gp160 565 581 547 563 0 214
365 GIKQLQTRVLAIERYLK gp160 572 588 554 570 11 214
366 RVLAVERYLKDQQLLGIW gp160 579 596 561 578 3 214
367 LKDQQLLGIWGCSGKLI gp160 587 603 569 585 0 214
368 GIWGCSGKLICTTAVPW gp160 594 610 576 592 0 214
369 KLICTTAVPWNSSWSNK gp160 601 617 583 599 1 214
370 VPWNSSWSNKSQEEIW gp160 608 623 590 605 0 214
371 WSNKSQEEIWDNMTWMQW gp160 614 631 596 613 8 214
372 IWDNMTWMQWDREISNY gp160 622 638 604 620 3 214
373 MQWDREISNYTNTIYRLL gp160 629 646 611 628 0 214
374 NYTNTIYRLLEDSQNQQEK gp160 637 655 619 637 5 214
375 LEDSQNQQEKNEKDLLAL gp160 646 663 628 645 1 214
376 EKNEKDLLALDSWQNLW gp160 654 670 636 652 2 214
377 LALDSWQNLWNWFDITNW gp160 661 678 643 660 0 214
378 LWNWFDITNWLWYIKIFI gp160 669 686 651 668 0 214
379 LWNWYIKIFIMIVGGLI gp160 677 693 659 675 0 214
380 IFIMIVGGLIGLRIIFAV gp160 684 701 666 683 1 214
381 LIGLRIIFAVLSIVNRVR gp160 692 709 674 691 0 214
382 AVLSIVNRVRQGYSPLSF gp160 700 717 682 699 2 214
383 VRQGYSPLSFQTRLPAPR gp160 708 725 690 707 0 214
384 SFQTLTPNPRGPDRLGRI gp160 716 733 698 715 1 214
385 PRGPDRLGRIEEEGGEQDR gp160 724 742 706 724 0 214
386 IEEEGGEQDRDRSIRLV gp160 733 749 715 731 0 214
387 QDRDRSIRLVSGFLALA gp160 740 756 722 738 0 214
388 RLVSGFLALAWDDLRSL gp160 747 763 729 745 1 214
389 ALAWDDLRSLCLFSYHRL gp160 754 771 736 753 0 214
390 SLCLFSYHRLRDLILIA gp160 762 778 744 760 0 214
391 HRLRDLILIAARAVELL gp160 769 785 751 767 1 214
392 LIAARAVELLGRSSLRGL gp160 776 793 758 775 0 214
393 LLGRSSLRGLQRGWEALKYL gp160 777 796 766 785 2 214
394 QRGWEALKYLGSLVQYWGL gp160 787 805 776 794 5 214
395 LGSYLVSQYWGLELKKSAVSLL gp160 794 815 785 804 1 214
396 ELKKSAVSLLDTIAIAVA gp160 806 823 795 812 4 214
397 LLDTIAIAVAEGTDRII gp160 814 830 803 819 3 214
398 AVAEGTDRIIELIQRICR gp160 821 838 810 827 1 214
399 IIELIQRICRAIRNIPRR gp160 829 846 818 835 0 214
400 CRAILHIPRRIRQGL gp160 837 851 826 838 2 214
401 NIPRRQGFEAALQ gp160 842 856 831 843 1 214
67 MGGKWSKCSIVGWPAIR Nef 1 17 1 17 0 309
68 CSIVGWPAIRERMMR Nef 8 22 8 22 7 309
69 WPAIRERMRRTEPAAEGV Nef 13 30 13 30 1 309
70 RRTEPAAEGVGAASQDL Nef 21 37 21 37 0 309
71 EGVGAASQDLDKYGAL Nef 28 43 28 43 1 309
72 SQDLDKYGALTSSNTDTTNA Nef 34 53 34 53 0 309
73 GALTSSNTDTTNADCAWL Nef 41 58 41 58 4 309
74 DTTNADCAWLRAQEEEEEV Nef 49 67 49 67 1 309
75 WLRAQEEEGEVGFPVRPQV Nef 57 74 57 75 3 309
76 EVGFPVRPQVPLRPMTFK Nef 65 82 66 83 75 309
77 QVPLRPMTFKGAFDLSFF Nef 73 90 74 91 11 309
78 FKGAFDLSFFLKEKGGL Nef 81 97 82 98 86 309
79 SFFLKEKGGLEGLIYSKK Nef 88 105 89 106 4 309
80 GLEGLIYSKKRQEILDLW Nef 96 113 97 114 4 309
81 KKRQEILDLWVYHTQGYF Nef 104 121 105 122 59 309
82 LWVYHTQGYFPDWQNY Nef 112 127 113 128 22 309
83 QGYFPDWQNYTPGPGVRY Nef 118 135 119 136 13 309
84 NYTPGPGVRYPLTFGWCF Nef 126 143 127 144 61 309
85 RYPLTFGWCFKLVPV Nef 134 148 135 149 25 309
86 FGWCFKLVPVDPREVEEA Nef 139 156 140 157 1 309
87 PVDPREVEEANEGEDNCL Nef 147 164 148 165 0 309
88 EANEGEDNCLLHPVCQH Nef 155 171 156 172 3 309
89 NCLLHPVCQHGMEDEHR Nef 162 178 163 179 0 309
90 CQHGMEDEHREVLQWKF Nef 169 185 170 186 2 309
91 EHREVLQWKFDSQLARRH Nef 176 193 177 194 0 309
92 KFDSQLARRHMARELH Nef 184 199 185 200 0 309
93 ARRHMARELHPEFYKDC Nef 190 206 191 207 2 309

Last modified: Thu Jun 9 09:10:39 MDT 2005

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