HIV molecular immunology database

 

Peptide Data

This table shows the peptide data, sorted by HXB2 location. The table also lists the peptides' locations relative to the B reference sequence and the number of subject reactions (out of 150 subjects) for each peptide.

The data are also available in a comma-separated value (CSV) file for import to your favorite spreadsheet.

Peptide Sequence Protein HXB2 loc Reactions
Rch01 MGARASVLSGGELDRWEKIR p17 1 20 1
Rch02 GELDRWEKIRLRPGGKKKYK p17 11 30 13
Rch03 LRPGGKKKYKLKHIVWASRE p17 21 40 14
Rch04 LKHIVWASREELERFAVNPGL p17 31 50 5
Rch05 LERFAVNPGLLETSEGCRQI p17 41 60 1
Rch06 LETSEGCRQILGQLQPSLQT p17 51 70 1
Rch07 LGQLQPSLQTGSEELRSLYN p17 61 80 1
Rch08 GSEELRSLYNTVATLYCVHQ p17 71 90 10
Rch09 RIEIKDTKEALDKIEEEQNK p17 91 110 1
Rch10 QMVHQAISPRTLNAWVKVVE p24 9 28 3
Rch11 TLNAWVKVVEEKASFPEVIP p24 19 38 2
Rch12 EKASFPEVIPMFSALSEGAT p24 29 48 6
Rch13 MFSALSEGATPQDLNTMLNT p24 39 58 10
Rch14 PQDLNTMLNTVGGHQAAMQM p24 49 68 3
Rch15 VGGHQAAMQMLKETINEEAA p24 59 78 2
Rch16 LKETINEEAAEWDRVHPVHA p24 69 88 6
Rch17 EWDRVHPVHAGPIAPGQMRE p24 79 98 2
Rch18 PRGSDIAGTTSTLQEQIGWM p24 99 118 1
Rch19 STLQEQIGWMTNNPPIPVGE p24 109 128 1
Rch20 TNNPPIPVGEIYKRWIILGL p24 119 138 7
Rch21 IYKRWIILGLNKIVRMYSPT p24 129 148 1
Rch22 EPFRDYVDRFYKTLRAEQAS p24 159 178 4
Rch23 YKTLRAEQASQEVKNWMTET p24 169 188 5
Rch24 RVLAEAMSQVTNSAT p24-p2p7p1p6 229 12 1
Rch25 TNSATIMMQRGNFRNQRKIV p2p7p1p6 8 27 1
Rch26 HQMKDCTERQANFLGKIWPS p2p7p1p6 58 77 6
Rch27 ANFLGKIWPSYKGRPGNFLQ p2p7p1p6 68 87 4
Rch28 DKELYPLTSLRSLFGNDPSSQ p2p7p1p6 117 137 1
Rch29 LWQRPLVTIKIGGQLKEALL Protease 5 24 1
Rch30 EICGHKAIGTVLVGPTPVNI Protease 65 84 1
Rch31 VLVGPTPVNIIGRNLLTQIG Protease 75 94 2
Rch32 HPAGLKKKKSVTVLDVGDAY RT 96 115 4
Rch33 VTVLDVGDAYFSVPLDEDFR RT 106 125 3
Rch34 FSVPLDEDFRKYTAFTIPSI RT 116 135 2
Rch35 KYTAFTIPSINNETPGIRYQ RT 126 145 2
Rch36 NNETPGIRYQYNVLPQGWKG RT 136 155 1
Rch37 YNVLPQGWKGSPAIFQSSMT RT 146 165 2
Rch38 SPAIFQSSMTKILEPFRKQN RT 156 175 6
Rch39 KILEPFRKQNPDIVIYQYMD RT 166 185 3
Rch40 PDKWTVQPIVLPEKDSWTVN RT 236 255 1
Rch41 LPEKDSWTVNDIQKLVGKLN RT 246 265 1
Rch42 DIQKLVGKLNWASQIYPGIK RT 256 275 2
Rch43 TKALTEVIPLTEEAELELAE RT 286 305 1
Rch44 QWTYQIYQEPFKNLKTGKYA RT 336 355 1
Rch45 KLTTEAVQKITTESIVIWGK RT 366 385 2
Rch46 TPKFKLPIQKETWETWWTEY RT 386 405 6
Rch47 WQATWIPEWEFVNTPPLVKL RT 406 425 1
Rch48 WYQLEKEPIVGAETFYVDGA RT 426 445 2
Rch49 GAETFYVDGAANRETKLGKA RT 436 455 1
Rch50 ANRETKLGKAGYVTNRGRQK RT 446 465 2
Rch51 ELVNQIIEQLIKKEKVYLAW RT 516 535 1
Rch52 IKKEKVYLAWVPAHKGIGGN RT 526 545 1
Rch53 FNLPPVVAKEIVASCDKCQL Integrase 26 45 2
Rch54 THLEGKVILVAVHVASGYIE Integrase 66 85 1
Rch55 KELKKIIGQVRDQAEHLKTA Integrase 156 175 1
Rch56 VQMAVFIHNFKRKGGIGGYS Integrase 176 195 1
Rch57 KRKGGIGGYSAGERIVDIIA Integrase 186 205 1
Rch58 AGERIVDIIATDIQTKELQK Integrase 196 215 1
Rch59 DIKVVPRRKAKIIRDYGKQM Integrase 256 275 1
Rch60 KIIRDYGKQMAGDDCVASRQ Integrase 266 285 1
Rch61 LLMICSAT gp160 24 31 1
Rch62 EKLWVTVYYGVPVWKEATTT gp160 32 51 3
Rch63 VPVWKEATTTLFCASDAKAY gp160 42 61 4
Rch64 NFNMWKNNMVEQMHEDIISLL gp160 92 112 1
Rch65 PKISFEPIPIHYCAPAGFAI gp160 206 225 1
Rch66 HYCAPAGFAILKCNDKKFSG gp160 216 235 1
Rch67 CTRPNYNKRKRIHIGPGRAF gp160 296 317 1
Rch68 RIHIGPGRAFYTTKNIIGTI gp160 308 326 1
Rch69 ERYLKDQQLLGF gp160 584 595 2
Rch70 IWVDLRSLFLFSYH gp160 756 769 1
Rch71 EVLKYWWNLLQYWSQELKSS gp160 791 810 3
Rch72 LHIPTRIRQGLERALL gp160 841 856 3
Rch73 GGKWSKSSVVGWPTVRERMR Nef 2 21 1
Rch74 GWPTVRERMRRAEPAADGVG Nef 12 31 1
Rch75 AASRDLEKHGAITSSNTAAT Nef 32 51 1
Rch76 NAACAWLEAQEEEEVGFPVT Nef 52 71 1
Rch77 EEEEVGFPVTPQVPLRPMTY Nef 62 81 5
Rch78 PQVPLRPMTYKAAVDLSHFL Nef 72 91 12
Rch79 KAAVDLSHFLKEKGGLEGLI Nef 82 101 5
Rch80 KEKGGLEGLIHSQRRQDILD Nef 92 111 4
Rch81 HSQRRQDILDLWIYHTQGYF Nef 102 121 6
Rch82 PDWQNYTPGPGVRYPLTFGW Nef 122 141 4
Rch83 GVRYPLTFGWCYKLVPVEPD Nef 132 151 14
Rch84 CYKLVPVEPDKVEEANKGEN Nef 142 161 1
Rch85 TSLLHPVSLHGMDDPEREVL Nef 162 181 4
Rch86 GMDDPEREVLEWRFDSRLAF Nef 172 191 5
Rch87 EWRFDSRLAFHHVARELHPE Nef 182 201 6

Last modified: Thu Jun 9 09:09:27 MDT 2005

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