HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    HIVU50786		    1047 bp    DNA     linear	VRL 09-MAY-1996
DEFINITION  Human immunodeficiency virus type 1 GP120 gene, V1 to V5 region,
	    partial cds
ACCESSION   U50786
VERSION     U50786.1 GI:1314531
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1047)
            Show all sequences for reference 1
  AUTHORS   Zhu,T., Wang,N., Carr,A., Nam,D.S., Moor-Jankowski,R., Cooper,D.A.
	    and Ho,D.D.
  TITLE     Genetic characterization of human immunodeficiency virus type 1 in
	    blood and genital secretions: evidence for viral
	    compartmentalization and selection during sexual transmission
  JOURNAL   J. Virol. 70 (5), 3098-3107 (1996)
  PUBMED    8627789
REFERENCE   2 (bases 1 to 1047)
            Show all sequences for reference 2
  AUTHORS   Zhu,T., Wang,N., Car,A., Nam,D.S., Moor-Jankowski,R., Cooper,D.A.
	    and Ho,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-1996) Tuofu Zhu, The Aaron Diamond AIDS Research
	    Center for City of New York, 455 First Avenue, 7th Floor, New York,
	    NY 10016, USA
FEATURES             Location/Qualifiers
     source	     1..1047
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /strain="AD39PB10"
		     /db_xref="taxon:11676"
     CDS	     <1..>636
		     /codon_start="1"
		     /transl_table="1"
		     /product="GP120, V1 to V5 region"
		     /protein_id="AAC54813.1"
		     /db_xref="GI:1314532"
		     /translation="VKLTPLCVTLNCTDYTNTNSTNSGNVTDTEMKNCSFDITSSIRD
		     KRQKEYALLYKLDVVPIDNDNTSYRLISCNTSVITQACPKVTFEPIPIHYCAPAGFAI
		     LKCNHKTFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSANFSDNTKT
		     IIVQLKEPIEINCTRPNNNTRRSIHIGPGRAFHATGQIIGDIRQAHCNISKA"
BASE COUNT	403 a	 182 c	  199 g    263 t
ORIGIN
       1 gtaaaattaa ccccactctg tgttacttta aattgcactg attatactaa tacaaatagc 
      61 actaattcgg ggaatgttac cgataccgag atgaaaaact gctctttcga tatcacctca 
     121 agcataagag ataagaggca gaaagaatat gcacttttgt ataaacttga tgtagtacca 
     181 atagataatg ataataccag ctataggttg ataagttgta atacctcagt cattacacag 
     241 gcctgtccaa aggtaacctt tgagccaatt cccatacatt attgtgcccc ggctggtttt 
     301 gcgattctaa agtgtaacca taagacgttc aatggaacag gaccttgtaa aaatgtcagc 
     361 acagtacaat gtacacatgg aattaggcca gtagtatcaa ctcaattgct gttaaacggc 
     421 agtctagcag aagaagaggt agtaattaga tctgccaatt tctcagacaa tactaaaacc 
     481 ataatagtac agctgaaaga accaatagaa attaattgta caagacccaa caataataca 
     541 agaagaagta tacatatagg accagggaga gcatttcatg caacaggaca aataatagga 
     601 gatatcagac aggcacattg taatattagt aaagcaaaat ggaataacac tttacaacag 
     661 atagttagca aactaagaga acaatttaat aaaacaataa tctttaatca atcctcagga 
     721 ggggacccag aaattgtaat gcacagtttt aattgtagag gggaattttt ttactgtaat 
     781 acaacacaac tgtttaatag tacttggaat gttaatagta cttgggatat tactaaagag 
     841 ttaaacaaca cagaaggaaa tgccacactc actctcccat gcagaataaa acaaattgta 
     901 aacatgtggc aggaagtagg aaaagcaatg tatgctcctc ctatcgaggg acaaattaga 
     961 tgttcatcaa atattacagg gctgatattg acaagagatg gtggaacgaa caatagcacg 
    1021 aacgagacct tcagacctgg aggagga
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.