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LOCUS HIV1U23670 609 bp DNA linear VRL 27-AUG-1996
DEFINITION Human immunodeficiency virus type 1 patient 594 sample 1985 clone
6PRE from the Netherlands, envelope glycoprotein (env) gene V3-V5
region, partial cds
ACCESSION U23670
VERSION U23670.1 GI:799066
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 609)
Show all sequences for reference 1
AUTHORS Shpaer,E.G., Delwart,E.L., Kuiken,C.L., Goudsmit,J., Bachmann,M.H.
and Mullins,J.I.
TITLE Conserved V3 loop sequences and transmission of human
immunodeficiency virus type 1
JOURNAL AIDS Res. Hum. Retroviruses 10 (12), 1679-1684 (1994)
PUBMED 7888227
REFERENCE 2 (bases 1 to 609)
Show all sequences for reference 2
AUTHORS Delwart,E.L., Busch,M.P., Kalish,M.L., Mosley,J.W. and Mullins,J.I.
TITLE Rapid molecular epidemiology of human immunodeficiency virus
transmission
JOURNAL AIDS Res. Hum. Retroviruses 11 (9), 1081-1093 (1995)
PUBMED 8554905
REFERENCE 3 (bases 1 to 609)
Show all sequences for reference 3
AUTHORS Shpaer,E.G.
TITLE Direct Submission
JOURNAL Submitted (28-MAR-1995) Eugene G. Shpaer, Applied Biosystems,
Perkin-Elmer, 850 Lincoln Centre Dr., Foster City, CA 94404, USA
COMMENT Sample was collected close to the time of seroconversion. NCBI gi:
799066
FEATURES Location/Qualifiers
source 1..609
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="594 sample 1985"
/db_xref="taxon:11676"
/clone="6PRE"
gene 1..609
/gene="env"
CDS <1..>609
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein, V3-V5 region"
/protein_id="AAB06650.1"
/db_xref="GI:799067"
/translation="EEEVVIRSENFTNNAKTIIVHLNESVEINCTRPNNNTRKSIHIG
PGRAFYATGDIIGDIRQAHCNISRAKWNNTLKQIVRKLRDQFGDTKTIIFKQSSGGDP
EIVMHSFNCGGEFFYCNTTQLFNSTWNGTXGTNNIXGNNTITLPCRIKQIINRWQEVG
KAMYAPPIRGQIRCSSNITGLLLTRDGGRNMTRNETFRPEGGD"
BASE COUNT 249 a 97 c 126 g 134 t 3 other
ORIGIN
1 gaagaagagg tagtaattag atctgaaaat ttcacgaaca atgctaaaac cataatagta
61 catctgaatg aatctgtaga aattaattgt acaagaccca acaacaatac aagaaaaagc
121 atacatatag gaccagggag agcattttat gcaacaggag acataatagg agatataaga
181 caagcacatt gtaacattag cagagcaaaa tggaataaca ctttaaaaca gatagttaga
241 aaattaagag accaatttgg ggatactaaa acaataatct ttaaacaatc ctcaggaggg
301 gacccagaaa ttgtaatgca cagttttaat tgtggagggg aatttttcta ctgtaataca
361 acacagctgt ttaatagcac ttggaatggt acgnaaggga caaataacat tgnnggaaat
421 aacactatca cactcccatg cagaataaaa caaattataa acaggtggca ggaagtagga
481 aaagcaatgt atgcccctcc catcagggga caaattagat gttcatcaaa tattacaggg
541 ctgctattaa caagagatgg tgggcgtaac atgaccagga acgagacctt cagacctgaa
601 ggaggagat
//
last modified: Tue May 31 10:56 2022