HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    HIV1U16883		     627 bp    DNA     linear	VRL 22-MAR-1995
DEFINITION  Human immunodeficiency virus type 1 clone D88-4 nef gene, complete
	    cds
ACCESSION   U16883
VERSION     U16883.1 GI:722100
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 627)
            Show all sequences for reference 1
  AUTHORS   Huang,Y., Zhang,L. and Ho,D.D.
  TITLE     Characterization of nef sequences in long-term survivors of human
	    immunodeficiency virus type 1 infection
  JOURNAL   J. Virol. 69 (1), 93-100 (1995)
  PUBMED    7983771
REFERENCE   2 (bases 1 to 627)
            Show all sequences for reference 2
  AUTHORS   Huang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-1994) Yaoxing Huang, Aaron Diamond AIDS Research
	    Center, 455 First Avenue, New York, NY 10016, USA
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Cao,Y., Qin,L., Zhang,L., Safrit,J. and Ho,D.D.
  TITLE     Virologic and immunologic characterization of long-term survivors
	    of human immunodeficiency virus type 1 infection.
  JOURNAL   N. Engl. J. Med.. 332(4); 201-8 (1995)
  PUBMED    7808485
COMMENT     NCBI gi: 722100
FEATURES             Location/Qualifiers
     source	     1..627
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /db_xref="taxon:11676"
		     /clone="D88-4"
     gene	     1..627
		     /gene="nef"
     CDS	     1..627
		     /gene="nef"
		     /codon_start="1"
		     /transl_table="1"
		     /protein_id="AAA63819.1"
		     /db_xref="GI:722101"
		     /translation="MGGKWSKSSIVGWPAVRERMRRARAEPAADGVGAASRDLEKHGA
		     LTNSNTAANNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGL
		     IFSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPEKVEEANA
		     GENNCLLHPISLHGMDDPEKEVLQWKFDSRLAFHHMARELHPEYYKDC"
BASE COUNT	193 a	 133 c	  175 g    126 t
ORIGIN
       1 atgggtggta agtggtcaaa aagtagtatt gttggatggc ctgctgtaag ggaaagaatg 
      61 agacgagctc gagctgagcc agcagcagat ggggtgggag cagcatctcg agacctagaa 
     121 aaacatggag cactcacaaa tagcaataca gcagctaaca atgctgattg tgcctggcta 
     181 gaagcacaag aggaggagga agtgggtttt ccagtcagac ctcaggtacc tttaagacca 
     241 atgacttaca agggagcttt agatcttagc cactttttaa aagaaaaggg gggactggaa 
     301 gggctaattt tctcccagaa aagacaagat atccttgatc tgtgggtcta ccacacacag 
     361 ggctacttcc ctgattggca gaactacaca ccagggccag ggatcagata tccactgacc 
     421 tttggatggt gcttcaagct agtaccagta gagccagaga aggtagaaga ggccaatgca 
     481 ggagagaaca actgcctgct acaccctata agcctgcatg ggatggatga cccagagaaa 
     541 gaagtgctgc agtggaagtt tgacagccgc ctagcatttc atcacatggc ccgagagctg 
     601 catccggagt actacaaaga ctgctga
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.