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LOCUS HIVFLQ22 351 bp RNA linear VRL 09-JUL-1992
DEFINITION Human immunodeficiency virus type 1, viral sample LC13, V3 region
ACCESSION M90942
VERSION M90942.1 GI:327151
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 351)
Show all sequences for reference 1
AUTHORS Ou,C.-Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
Korber,B.T.M., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., MacInnes,K.A.,
Curran,J.W. and Jaffe,H.W.
TITLE Molecular epidemiology of HIV transmission in a dental practice
JOURNAL Science 256 (5060), 1165-1171 (1992)
PUBMED 1589796
COMMENT Kindly submitted in computer readable form by the CDC (Centers for
Disease Control), Atlanta, GA. There are 236 sequences in this
sample group; all are env V3 sequences or env V4C3V5. They include:
dentist(13), dentist's patients pA(28), pB(34), pC(8), pD(14),
pE(11), pF(13), pG(9), pH(6) and local controls (LC), LC01(28),
LC02(11), LC03(19), LC04(6) and other LC up to LC42 (1-2 sequences
per person).
FEATURES Location/Qualifiers
source 1..351
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/db_xref="taxon:11676"
CDS <1..>351
/note="env polyprotein"
/codon_start="1"
/transl_table="1"
/protein_id="AAA44547.1"
/db_xref="GI:327152"
/translation="GVVIRSDNFTDNAKTIIVQLNKSVEINCTRPSNNTRKSITIGPG
RAFYTTGEVIGDIRQAHCNISRTKWNDTLKQIVRKLGEKFGNETKIIFEPSSGGDPEI
TTHSFNCGGDFSTVI"
BASE COUNT 146 a 50 c 72 g 83 t
ORIGIN
1 ggggtagtaa ttagatctga caatttcacg gacaatgcta aaaccataat agtacagctg
61 aataaatcag tagaaattaa ttgtacaaga cccagcaaca atactagaaa aagtataact
121 ataggaccag gaagagcttt ttatacaaca ggagaagtaa taggagatat aagacaagca
181 cattgtaaca ttagtaggac aaaatggaat gacaccttaa aacagatagt tagaaaatta
241 ggagagaaat ttgggaatga aacaaaaata atctttgagc cctcctcagg aggggaccca
301 gaaattacaa cgcacagttt taattgtgga ggggattttt ctactgtaat a
//
last modified: Tue May 31 10:56 2022