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LOCUS	    HIV13294GA		     396 bp    DNA     linear	VRL 27-JAN-1995
DEFINITION  Human immunodefiency virus type 1 (HIV190SE3294SMI.digPD), proviral
	    gag gene, p17 region
ACCESSION   L39049
VERSION     L39049.1 GI:639734
KEYWORDS    gag gene.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 396)
            Show all sequences for reference 1
  AUTHORS   Albert,J., Wahlberg,J., Leitner,T., Escanilla,D. and Uhlen,M.
  TITLE     Analysis of a rape case by direct sequencing of the human
	    immunodeficiency virus type 1 pol and gag genes
  JOURNAL   J. Virol. 68 (9), 5918-5924 (1994)
  PUBMED    7520096
COMMENT     Key to name in Description follows WHO name proposal: HIV1=organism
	    87=year of sampling SE=Sweden (country were sample was taken)
	    number=sample code SMI=Swedish Institute for Infectious Disease
	    Control di=direct sequencing g=gag gene P=uncultured patient PBMC
	    D=DNA sample source.
FEATURES             Location/Qualifiers
     source	     1..396
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /db_xref="taxon:11676"
		     /note="Female virus population, 5 weeks after
		     transmission. The sequence describes a virus population
		     directly derived from uncultured patient PBMC.
		     Heterogenous positions are indicated by using the IUPAC
		     codes, i.e. these positions are not ambiguious."
BASE COUNT	151 a	  73 c	   87 g     72 t     13 other
ORIGIN
       1 ggatgtagta nnnnaaaaca tatagtatgg gcaagcaggg aactagaacg atttgcagtt 
      61 aatcctggcc tgttagaawc akcagaaggc tgtwgacaaa tactgggaca gctacaacca 
     121 gcccttcaga caggatcaga agaacttara tcattatata atacagtagc aaccctctat 
     181 tgtgtgcatc aagagataga gataaaagac accaaggaag ctttagataa gatagaggaa 
     241 gagcaaaata aaagtaagaa aaaggcacag caggcagcag ccgcaggaac cagcagccag 
     301 gtcagccaaa attaccctat agtgcwgaac atccakgsgs aaatggtaca tcakgccata 
     361 tcacctagaa ctttaaatgc atgggtaaaa gtagta
//
last modified: Tue May 31 10:56 2022


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