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LOCUS HIV13294GA 396 bp DNA linear VRL 27-JAN-1995
DEFINITION Human immunodefiency virus type 1 (HIV190SE3294SMI.digPD), proviral
gag gene, p17 region
ACCESSION L39049
VERSION L39049.1 GI:639734
KEYWORDS gag gene.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 396)
Show all sequences for reference 1
AUTHORS Albert,J., Wahlberg,J., Leitner,T., Escanilla,D. and Uhlen,M.
TITLE Analysis of a rape case by direct sequencing of the human
immunodeficiency virus type 1 pol and gag genes
JOURNAL J. Virol. 68 (9), 5918-5924 (1994)
PUBMED 7520096
COMMENT Key to name in Description follows WHO name proposal: HIV1=organism
87=year of sampling SE=Sweden (country were sample was taken)
number=sample code SMI=Swedish Institute for Infectious Disease
Control di=direct sequencing g=gag gene P=uncultured patient PBMC
D=DNA sample source.
FEATURES Location/Qualifiers
source 1..396
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/db_xref="taxon:11676"
/note="Female virus population, 5 weeks after
transmission. The sequence describes a virus population
directly derived from uncultured patient PBMC.
Heterogenous positions are indicated by using the IUPAC
codes, i.e. these positions are not ambiguious."
BASE COUNT 151 a 73 c 87 g 72 t 13 other
ORIGIN
1 ggatgtagta nnnnaaaaca tatagtatgg gcaagcaggg aactagaacg atttgcagtt
61 aatcctggcc tgttagaawc akcagaaggc tgtwgacaaa tactgggaca gctacaacca
121 gcccttcaga caggatcaga agaacttara tcattatata atacagtagc aaccctctat
181 tgtgtgcatc aagagataga gataaaagac accaaggaag ctttagataa gatagaggaa
241 gagcaaaata aaagtaagaa aaaggcacag caggcagcag ccgcaggaac cagcagccag
301 gtcagccaaa attaccctat agtgcwgaac atccakgsgs aaatggtaca tcakgccata
361 tcacctagaa ctttaaatgc atgggtaaaa gtagta
//
last modified: Tue May 31 10:56 2022