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LOCUS HIVV3AAM 123 bp DNA linear VRL 21-NOV-1994
DEFINITION Human immunodeficiency virus type 1 proviral envelope glycoprotein
gene V3 region from A 130/J2865 (from adult)
ACCESSION L08298
VERSION L08298.1 GI:291310
KEYWORDS V3 neutralization domain; V3 region; envelope protein; epitope.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 123)
Show all sequences for reference 1
AUTHORS Scarlatti,G., Leitner,T., Halapi,E., Wahlberg,J., Marchisio,P.,
Clerici-Schoeller,M.A., Wigzell,H., Fenyo,E.M., Albert,J., Uhlen,M.
and Rossi,P.
TITLE Comparison of variable region 3 sequences of human immunodeficiency
virus type 1 from infected children with the RNA and DNA sequences
of the virus populations of their mothers
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 90 (5), 1721-1725 (1993)
PUBMED 8446584
COMMENT Proviral sequence taken from cultured lymphocytes. Any ambiguous
base (except \'n\') indicates that all nucleotides implied by
IUPAC code were found at that position by direct sequencing. The
ambiguous base \'n\' indicates that the base is unknown. NCBI gi:
291310 V3-ID: B_IT1.ID These 10 sequences are from infants infected
in utero. The sequences came from PCR amplified DNA of uncultured
PBMCs, PCR amplified DNA of cultured PBMCs, or from RNA from serum
collected at or shortly after delivery. (Scarlatti93). GenBank
accession numbers L08277--L08286. Sequences from the mothers of
these infants are also available in entries with accession numbers
L08287--L08372 All mothers in this study were drug users or sexual
partners of drug users.
FEATURES Location/Qualifiers
source 1..123
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="A 130/J2865"
/db_xref="taxon:11676"
/note="Specific host: developmental_stage = adult;
tissue_type = blood; cell_type = PBMC"
BASE COUNT 55 a 18 c 24 g 25 t 1 other
ORIGIN
1 gcaattaatt gtacaagacc caacaacaat acaagaagaa gtataartat aggaccaggg
61 agagcatttt atgcaacagg agacataata ggagatataa gacaagcaca ttgtaacatt
121 agt
//
last modified: Tue May 31 10:56 2022