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LOCUS HIVV3IAB 297 bp DNA linear VRL 21-NOV-1994
DEFINITION Human immunodeficiency virus type 1 proviral envelope glycoprotein
gene V3 region from B 130/2866 (from infant)
ACCESSION L08278
VERSION L08278.1 GI:291386
KEYWORDS V3 neutralization domain; V3 region; envelope protein; epitope.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Scarlatti,G., Leitner,T., Halapi,E., Wahlberg,J., Marchisio,P.,
Clerici-Schoeller,M.A., Wigzell,H., Fenyo,E.M., Albert,J., Uhlen,M.
and Rossi,P.
TITLE Comparison of variable region 3 sequences of human immunodeficiency
virus type 1 from infected children with the RNA and DNA sequences
of the virus populations of their mothers
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 90 (5), 1721-1725 (1993)
PUBMED 8446584
COMMENT Proviral sequence taken directly from patient's lymphocytes. Any
ambiguous base (except \'n\') indicates that all nucleotides
implied by IUPAC code were found at that position by direct
sequencing. The ambiguous base \'n\' indicates that the base is
unknown. NCBI gi: 291386 V3-ID: B_IT1.ID These 10 sequences are
from infants infected in utero. The sequences came from PCR
amplified DNA of uncultured PBMCs, PCR amplified DNA of cultured
PBMCs, or from RNA from serum collected at or shortly after
delivery. (Scarlatti93). GenBank accession numbers L08277--L08286.
Sequences from the mothers of these infants are also available in
entries with accession numbers L08287--L08372 All mothers in this
study were drug users or sexual partners of drug users.
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="B 130/2866"
/db_xref="taxon:11676"
/note="Specific host: developmental_stage = infant;
tissue_type = blood; cell_type = PBMC"
BASE COUNT 130 a 40 c 59 g 68 t
ORIGIN
1 gaagaagagg tagtatttag gtctgagaat ttcacggaca atactaaaac cataatagta
61 cagctgaatg aatctgtagc aattaattgt acaagaccca acaacaatac aagaagaagt
121 ataagtatag gaccagggag agcattttat gcaacaggag acataatagg agatataaga
181 caagcacatt gtaacattag tgaagcaaaa tggaataaca ctttaaaaca gatagttaaa
241 aaattaggag aacaatttgt gaataaaaca atagtcttta atcactcctc aggaggg
//
last modified: Tue May 31 10:56 2022