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LOCUS	    KJ362128		    1491 bp    RNA     linear	VRL 12-MAY-2014
DEFINITION  Simian immunodeficiency virus isolate EC10.P2E4 from USA envelope
	    glycoprotein (env) gene, partial cds
ACCESSION   KJ362128
VERSION     KJ362128.1 GI:633019464
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus (SIV)
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1491)
            Show all sequences for reference 1
  AUTHORS   Mandell,D.T., Kristoff,J., Gaufin,T., Gautam,R., Ma,D., Sandler,N.,
	    Haret-Richter,G., Xu,C., Aamer,H., Dufour,J., Trichel,A.,
	    Douek,D.C., Keele,B.F., Apetrei,C. and Pandrea,I.
  TITLE     Pathogenic Features Associated with Increased Virulence upon Simian
	    Immunodeficiency Virus Cross-Species Transmission from Natural
	    Hosts.
  JOURNAL   J. Virol.. 88(12); 6778-6792 (2014)
  PUBMED    24696477
REFERENCE   2 (bases 1 to 1491)
            Show all sequences for reference 2
  AUTHORS   Del Prete,G.Q., Mandell,D.T., Keele,B.F., Hatziioannou,T.,
	    Apetrei,C. and Pandrea,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2014) AIDS and Cancer Virus Program, Frederick
	    National Laboratory, 1050 Boyles Street, Frederick, MD 21702, USA
COMMENT     ##Assembly-Data-START## Assembly Method Sequencher v. 5.0.1
	    Sequencing Technology Sanger dideoxy sequencing
	    ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..1491
		     /organism="Simian immunodeficiency virus"
		     /mol_type="genomic RNA"
		     /strain="SIVagm"
		     /isolate="EC10.P2E4"
		     /host="Macaca nemestrina (pigtail macaque)"
		     /db_xref="taxon:11723"
		     /country="USA"
     gene	     <1..>1491
		     /gene="env"
     CDS	     <1..>1491
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AHZ44633.1"
		     /db_xref="GI:633019465"
		     /translation="GYALLKCNDHDYRGHKNCQNVSVAACTGLMNTTISTGIGINGSR
		     AENRTEIWQEDGDSNDTVIIKLNKYYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNT
		     RLKQAWCWFGGNWTQAWKEVRETIVKLPNTTYKGTRNISQIFLQRQWGDPEAENFFFN
		     CQGEFFYCKMDWFLNYLNNQSVDPDHNPCKDKGDKKCWQRTYVPCHIRQVVNDWYTLA
		     KKTYAPPREGHLECTSTATALYVELNYNSNNRTNVTLSPQIRSIWSYELGDYKLVEIK
		     PIGFAPTEVRRYTGPERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQ
		     QQKNLLAAVEQQQQMLKLTIWGVKNLNARVTALEKYLEDQARLNIWGCAFRQICHTTV
		     LWKFNNTPDWNNMTWQEWERQIGDLEGNISRTLEEAHEQEQKNLDSYQKLVSWSDFWS
		     WFDLSRWFGWLKIGFLVIAGIIGLRIVFIVIGLLRKFKAGYAPLSSL"
BASE COUNT	478 a	 281 c	  371 g    361 t
ORIGIN
       1 ggttatgccc ttttgaaatg taatgatcat gattatagag gccataagaa ctgtcaaaat 
      61 gtatcagtag cagcttgcac aggcttgatg aatactacta taagtacagg gatagggatt 
     121 aatggaagta gagcagaaaa taggacagaa atttggcaag aagatggtga tagcaatgat 
     181 acagtgatta ttaagttaaa taagtactat aatttaacaa taagatgtag aagaccagga 
     241 aacaagacag tgttaccagt caccataatg gctggcctag tgtttcatag tcagaaatat 
     301 aatactaggt tgaagcaggc ctggtgttgg ttcggaggaa actggacaca agcctggaaa 
     361 gaagttaggg agacaatagt aaagttgcca aacaccactt acaaaggaac caggaacata 
     421 agtcagatct tcctacaaag gcaatgggga gatccagaag ctgagaattt cttctttaat 
     481 tgccaaggag aatttttcta ttgtaaaatg gattggtttt tgaattacct caacaaccag 
     541 tcggtagacc ctgaccacaa cccctgtaag gacaaagggg ataaaaagtg ttggcaaaga 
     601 acctatgtgc cctgccatat taggcaagtg gttaatgact ggtataccct ggccaaaaag 
     661 acttatgcgc ctcccagaga aggtcacttg gagtgtacct ctacggccac tgcactgtat 
     721 gtggagctca attataacag taacaacaga acaaatgtga cattgagtcc tcaaataagg 
     781 tctatttggt cctatgaact aggggactac aaattggtgg aaataaaacc cattggcttt 
     841 gcaccaacag aagtaaggag atatacgggc ccagaaagac agaaaagggt gcccttcgtg 
     901 ctagggttcc taggcttctt aggagctgct ggagctgcaa tgggtgcagc agctacggcg 
     961 ctgacggtcc agtctcagca attacttgct gggatattgc agcagcagaa gaatctgctt 
    1021 gcggcagtag agcagcagca acaaatgcta aagctcacca tttggggtgt caaaaacctc 
    1081 aatgcccgcg tcacagctct tgagaagtac ctagaggatc aggcacggtt gaatatttgg 
    1141 ggatgcgcct ttaggcaaat atgccacaca acagtgcttt ggaagtttaa taacactcca 
    1201 gactggaaca acatgacctg gcaagagtgg gagcggcaaa taggtgactt ggaagggaat 
    1261 atcagtagaa cactggaaga ggctcatgaa caagagcaga aaaatttgga ttcatatcaa 
    1321 aaactggtct cctggtcaga cttctggtcc tggtttgatc tctctcgctg gtttggctgg 
    1381 ctaaaaatag gtttcctggt catagcaggc attataggac taaggatagt gttcatagtg 
    1441 ataggattgc ttaggaaatt taaggcaggg tatgcacctc tctcctccct c
//
last modified: Tue May 31 10:56 2022


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