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LOCUS KJ362099 1803 bp RNA linear VRL 12-MAY-2014
DEFINITION Simian immunodeficiency virus isolate BH66.Post.P2A9 from USA
nonfunctional envelope glycoprotein (env) gene, partial sequence
ACCESSION KJ362099
VERSION KJ362099.1 GI:633019407
KEYWORDS .
SOURCE Simian immunodeficiency virus (SIV)
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1803)
Show all sequences for reference 1
AUTHORS Mandell,D.T., Kristoff,J., Gaufin,T., Gautam,R., Ma,D., Sandler,N.,
Haret-Richter,G., Xu,C., Aamer,H., Dufour,J., Trichel,A.,
Douek,D.C., Keele,B.F., Apetrei,C. and Pandrea,I.
TITLE Pathogenic Features Associated with Increased Virulence upon Simian
Immunodeficiency Virus Cross-Species Transmission from Natural
Hosts.
JOURNAL J. Virol.. 88(12); 6778-6792 (2014)
PUBMED 24696477
REFERENCE 2 (bases 1 to 1803)
Show all sequences for reference 2
AUTHORS Del Prete,G.Q., Mandell,D.T., Keele,B.F., Hatziioannou,T.,
Apetrei,C. and Pandrea,I.
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2014) AIDS and Cancer Virus Program, Frederick
National Laboratory, 1050 Boyles Street, Frederick, MD 21702, USA
COMMENT ##Assembly-Data-START## Assembly Method Sequencher v. 5.0.1
Sequencing Technology Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1803
/organism="Simian immunodeficiency virus"
/mol_type="genomic RNA"
/strain="SIVagm"
/isolate="BH66.Post.P2A9"
/host="Macaca nemestrina (pigtail macaque)"
/db_xref="taxon:11723"
/country="USA"
gene <1..>1803
/gene="env"
misc_feature <1..>1803
/gene="env"
/note="nonfunctional envelope glycoprotein due to
mutation"
BASE COUNT 575 a 368 c 439 g 420 t 1 other
ORIGIN
1 ggttatgccc ttttgaaatg taatgatcat gattatagag gccataagaa ctgtcaaaat
61 gtatcagtag cagcttgcac aggcttgata aatactacta taagtacagg gatagggatt
121 aatggaagta gagcagaaaa taggacagaa atttggcaag aagatggtga tagcaatgat
181 acagtgatta ttaagttaaa taagtactat aatttaacaa taagatgtaa aagaccagga
241 aacaagacag tgttaccagt caccataatg gctggcctag tgtttcatag tcagaaatat
301 aatactaggt tgaagcaggc ctggtgttgg ttcggaggaa actggacaca agcctggaaa
361 gaagttaggg agacaatagt aaagctgcca aacaccactt ataagggaac caggaacata
421 agtcagatct tcctacaaag gcaatgggga gatccagaat ytgagaattt cttctttaat
481 tgccaaggag aatttttcta ttgtaaaatg gattggtttt tgaattacct caacaaccag
541 tcggtagacc cttaccacaa cccctgtggt aacaaagggg ataaaaagtg ttggcaaaga
601 acctatgtgc cctgccatat taggcaagtg gttaatgact ggtataccct ggccgaaaag
661 acttatgcgc ctcccagaga aggtcacttg gagtgtacct ctacggccac tgcactgtat
721 gtggagctca attataacag taacaacaga acaaatgtga cattgagtcc tcaaataagg
781 tctatttggt cctatgaact aggggactac aaattggtgg aaataaaacc cattggcttt
841 gcaccaacag aagtaaggag atatacgggc ccagaaagac aaaaaagggt gcccttcgtg
901 ctagggttcc taggcttctt aggagctgct ggagctgcaa tgggtgcagc agctacggcg
961 ctgacggtcc agtctcagca attacttgct gggatattgc agcagcagaa gaatctgctt
1021 gcggcagtag agcagcagca acaaatgcta aagctcacca tttggggtgt caaaaacctc
1081 aatgcccgcg tcacagctct tgagaagtac ctagaggatc aggcacggtt gaatatttgg
1141 ggatgcgcct ttaggcaaat atgccacaca acagtgcctt ggaagtttaa taacactcca
1201 gactggaaca atatgacctg gcaagagtgg gagcggcaaa taagtgactt ggaagggaat
1261 atcagtagaa cactggaaga ggctcatgaa caagagcaga aaaatttgga ttcatcaaaa
1321 actggtctcc tggtcagact tctggtcctg gtttgatctc tctcgctggt ttggctggct
1381 aaaaataggt ttcctggtca tagcaggcat tataggacta aggatagtgt tcatagtgat
1441 aggattgttt aggaaattta aggcagggta tgcacctctc tcctccctcc cctcttataa
1501 tcaacagatc catatccacc tggacaagga acagccaggc agagaagaag agccagacaa
1561 aggtgggcca agcagcgaca gcagatcata cacctggcag agagaattct tgaaccacct
1621 cctgagtcca ttgatcaact tgctcaggag cttgatcaat tggttcttga caacttgcag
1681 acacctcctc agacccctcc gccagtgcct ggaaaccacc cgacagggaa caagatcaac
1741 aagagcttac cttgaatatg ggtggcaaga attcaaagca gcagcagcag cgctcgcttt
1801 ggc
//
last modified: Tue May 31 10:56 2022