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LOCUS	    KJ362099		    1803 bp    RNA     linear	VRL 12-MAY-2014
DEFINITION  Simian immunodeficiency virus isolate BH66.Post.P2A9 from USA
	    nonfunctional envelope glycoprotein (env) gene, partial sequence
ACCESSION   KJ362099
VERSION     KJ362099.1 GI:633019407
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus (SIV)
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1803)
            Show all sequences for reference 1
  AUTHORS   Mandell,D.T., Kristoff,J., Gaufin,T., Gautam,R., Ma,D., Sandler,N.,
	    Haret-Richter,G., Xu,C., Aamer,H., Dufour,J., Trichel,A.,
	    Douek,D.C., Keele,B.F., Apetrei,C. and Pandrea,I.
  TITLE     Pathogenic Features Associated with Increased Virulence upon Simian
	    Immunodeficiency Virus Cross-Species Transmission from Natural
	    Hosts.
  JOURNAL   J. Virol.. 88(12); 6778-6792 (2014)
  PUBMED    24696477
REFERENCE   2 (bases 1 to 1803)
            Show all sequences for reference 2
  AUTHORS   Del Prete,G.Q., Mandell,D.T., Keele,B.F., Hatziioannou,T.,
	    Apetrei,C. and Pandrea,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2014) AIDS and Cancer Virus Program, Frederick
	    National Laboratory, 1050 Boyles Street, Frederick, MD 21702, USA
COMMENT     ##Assembly-Data-START## Assembly Method Sequencher v. 5.0.1
	    Sequencing Technology Sanger dideoxy sequencing
	    ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..1803
		     /organism="Simian immunodeficiency virus"
		     /mol_type="genomic RNA"
		     /strain="SIVagm"
		     /isolate="BH66.Post.P2A9"
		     /host="Macaca nemestrina (pigtail macaque)"
		     /db_xref="taxon:11723"
		     /country="USA"
     gene	     <1..>1803
		     /gene="env"
     misc_feature    <1..>1803
		     /gene="env"
		     /note="nonfunctional envelope glycoprotein due to
		     mutation"
BASE COUNT	575 a	 368 c	  439 g    420 t      1 other
ORIGIN
       1 ggttatgccc ttttgaaatg taatgatcat gattatagag gccataagaa ctgtcaaaat 
      61 gtatcagtag cagcttgcac aggcttgata aatactacta taagtacagg gatagggatt 
     121 aatggaagta gagcagaaaa taggacagaa atttggcaag aagatggtga tagcaatgat 
     181 acagtgatta ttaagttaaa taagtactat aatttaacaa taagatgtaa aagaccagga 
     241 aacaagacag tgttaccagt caccataatg gctggcctag tgtttcatag tcagaaatat 
     301 aatactaggt tgaagcaggc ctggtgttgg ttcggaggaa actggacaca agcctggaaa 
     361 gaagttaggg agacaatagt aaagctgcca aacaccactt ataagggaac caggaacata 
     421 agtcagatct tcctacaaag gcaatgggga gatccagaat ytgagaattt cttctttaat 
     481 tgccaaggag aatttttcta ttgtaaaatg gattggtttt tgaattacct caacaaccag 
     541 tcggtagacc cttaccacaa cccctgtggt aacaaagggg ataaaaagtg ttggcaaaga 
     601 acctatgtgc cctgccatat taggcaagtg gttaatgact ggtataccct ggccgaaaag 
     661 acttatgcgc ctcccagaga aggtcacttg gagtgtacct ctacggccac tgcactgtat 
     721 gtggagctca attataacag taacaacaga acaaatgtga cattgagtcc tcaaataagg 
     781 tctatttggt cctatgaact aggggactac aaattggtgg aaataaaacc cattggcttt 
     841 gcaccaacag aagtaaggag atatacgggc ccagaaagac aaaaaagggt gcccttcgtg 
     901 ctagggttcc taggcttctt aggagctgct ggagctgcaa tgggtgcagc agctacggcg 
     961 ctgacggtcc agtctcagca attacttgct gggatattgc agcagcagaa gaatctgctt 
    1021 gcggcagtag agcagcagca acaaatgcta aagctcacca tttggggtgt caaaaacctc 
    1081 aatgcccgcg tcacagctct tgagaagtac ctagaggatc aggcacggtt gaatatttgg 
    1141 ggatgcgcct ttaggcaaat atgccacaca acagtgcctt ggaagtttaa taacactcca 
    1201 gactggaaca atatgacctg gcaagagtgg gagcggcaaa taagtgactt ggaagggaat 
    1261 atcagtagaa cactggaaga ggctcatgaa caagagcaga aaaatttgga ttcatcaaaa 
    1321 actggtctcc tggtcagact tctggtcctg gtttgatctc tctcgctggt ttggctggct 
    1381 aaaaataggt ttcctggtca tagcaggcat tataggacta aggatagtgt tcatagtgat 
    1441 aggattgttt aggaaattta aggcagggta tgcacctctc tcctccctcc cctcttataa 
    1501 tcaacagatc catatccacc tggacaagga acagccaggc agagaagaag agccagacaa 
    1561 aggtgggcca agcagcgaca gcagatcata cacctggcag agagaattct tgaaccacct 
    1621 cctgagtcca ttgatcaact tgctcaggag cttgatcaat tggttcttga caacttgcag 
    1681 acacctcctc agacccctcc gccagtgcct ggaaaccacc cgacagggaa caagatcaac 
    1741 aagagcttac cttgaatatg ggtggcaaga attcaaagca gcagcagcag cgctcgcttt 
    1801 ggc
//
last modified: Tue May 31 10:56 2022


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