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LOCUS KF937959 313 bp DNA linear VRL 13-JUL-2014
DEFINITION HIV-1 isolate Patient1_2005_SC40_1_1 from USA envelope glycoprotein
(env) gene, partial cds
ACCESSION KF937959
VERSION KF937959.1 GI:662571186
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 313)
Show all sequences for reference 1
AUTHORS Buzon,M.J., Sun,H., Li,C., Shaw,A., Seiss,K., Ouyang,Z.,
Martin-Gayo,E., Leng,J., Henrich,T.J., Li,J.Z., Pereyra,F.,
Zurakowski,R., Walker,B.D., Rosenberg,E.S., Yu,X.G. and
Lichterfeld,M.
TITLE HIV-1 persistence in CD4+ T cells with stem cell-like properties
JOURNAL Nat. Med. 20 (2), 139-142 (2014)
PUBMED 24412925
REFERENCE 2 (bases 1 to 313)
Show all sequences for reference 2
AUTHORS Buzon,M.J., Sun,H., Shaw,A., Seiss,K., Li,C., Ouyang,Z.,
Martin-Gayo,E., Henrich,T., Li,J., Pereyra,F., Zurakowski,R.,
Rosenberg,E.S., Yu,X.G. and Lichterfeld,M.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2013) Ragon Institute of Mgh, MIT, and Harvard,
400 Technology Sqr, Cambridge, MA 02139, USA
FEATURES Location/Qualifiers
source 1..313
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="Patient1_2005_SC40_1_1"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="USA: Boston"
/collection_date="2005"
gene <1..>313
/gene="env"
CDS <1..>313
/gene="env"
/note="V3; gp120"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AIE58132.1"
/db_xref="GI:662571187"
/translation="GSLAEEEVIIRSENFSNNARTIIVQLNTSVVIKCIRPNNNTRKS
IHIAPGRAFYTTGAIIGDIRKAHCNISRQNWTDTLKQIAEKLREQYGNKTIVFNKSSG
GD"
BASE COUNT 140 a 44 c 60 g 69 t
ORIGIN
1 ggcagtctag cagaagaaga ggtaataata agatctgaga atttctcgaa caatgctaga
61 accataatag tacagctgaa tacatctgta gtaataaagt gtataagacc caacaacaat
121 acaagaaaaa gtatacatat agcaccaggg agagcatttt atacaacagg agctataata
181 ggagatataa gaaaagcaca ttgtaacatt agtagacaaa attggactga cactttaaaa
241 cagatagctg aaaaattaag agaacaatat gggaataaaa caatagtttt taataaatcc
301 tcaggagggg acc
//
last modified: Tue May 31 10:56 2022