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LOCUS	    KF937959		     313 bp    DNA     linear	VRL 13-JUL-2014
DEFINITION  HIV-1 isolate Patient1_2005_SC40_1_1 from USA envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   KF937959
VERSION     KF937959.1 GI:662571186
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 313)
            Show all sequences for reference 1
  AUTHORS   Buzon,M.J., Sun,H., Li,C., Shaw,A., Seiss,K., Ouyang,Z.,
	    Martin-Gayo,E., Leng,J., Henrich,T.J., Li,J.Z., Pereyra,F.,
	    Zurakowski,R., Walker,B.D., Rosenberg,E.S., Yu,X.G. and
	    Lichterfeld,M.
  TITLE     HIV-1 persistence in CD4+ T cells with stem cell-like properties
  JOURNAL   Nat. Med. 20 (2), 139-142 (2014)
  PUBMED    24412925
REFERENCE   2 (bases 1 to 313)
            Show all sequences for reference 2
  AUTHORS   Buzon,M.J., Sun,H., Shaw,A., Seiss,K., Li,C., Ouyang,Z.,
	    Martin-Gayo,E., Henrich,T., Li,J., Pereyra,F., Zurakowski,R.,
	    Rosenberg,E.S., Yu,X.G. and Lichterfeld,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2013) Ragon Institute of Mgh, MIT, and Harvard,
	    400 Technology Sqr, Cambridge, MA 02139, USA
FEATURES             Location/Qualifiers
     source	     1..313
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="Patient1_2005_SC40_1_1"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA: Boston"
		     /collection_date="2005"
     gene	     <1..>313
		     /gene="env"
     CDS	     <1..>313
		     /gene="env"
		     /note="V3; gp120"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AIE58132.1"
		     /db_xref="GI:662571187"
		     /translation="GSLAEEEVIIRSENFSNNARTIIVQLNTSVVIKCIRPNNNTRKS
		     IHIAPGRAFYTTGAIIGDIRKAHCNISRQNWTDTLKQIAEKLREQYGNKTIVFNKSSG
		     GD"
BASE COUNT	140 a	  44 c	   60 g     69 t
ORIGIN
       1 ggcagtctag cagaagaaga ggtaataata agatctgaga atttctcgaa caatgctaga 
      61 accataatag tacagctgaa tacatctgta gtaataaagt gtataagacc caacaacaat 
     121 acaagaaaaa gtatacatat agcaccaggg agagcatttt atacaacagg agctataata 
     181 ggagatataa gaaaagcaca ttgtaacatt agtagacaaa attggactga cactttaaaa 
     241 cagatagctg aaaaattaag agaacaatat gggaataaaa caatagtttt taataaatcc 
     301 tcaggagggg acc
//
last modified: Tue May 31 10:56 2022


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