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LOCUS	    KF292365		     651 bp    RNA     linear	VRL 23-OCT-2013
DEFINITION  HIV-1 isolate Q0328091 from Cambodia reverse transcriptase (pol)
	    gene, partial cds
ACCESSION   KF292365
VERSION     KF292365.1 GI:550076465
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 651)
            Show all sequences for reference 1
  AUTHORS   Nouhin,J., Madec,Y., Ngo-Giang-Huong,N., Ferradini,L. and
	    Nerrienet,E.
  TITLE     Increased Risk of Q151M and K65R Mutations in Patients Failing
	    Stavudine-Containing First-Line Antiretroviral Therapy in Cambodia
  JOURNAL   PLoS ONE 8 (8), E73744 (2013)
  PUBMED    24015311
REFERENCE   2 (bases 1 to 651)
            Show all sequences for reference 2
  AUTHORS   Nouhin,J., Madec,Y., Ngo-Giang-Huong,N., Ferradini,L. and
	    Nerrienet,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUN-2013) HIV/Hepatitis Unit, Institut Pasteur du
	    Cambodge, 5, Monivong Blvd, Phnom Penh 12 201, Cambodia
COMMENT     ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
	    sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..651
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="Q0328091"
		     /isolation_source="plasma of HIV-1 infected and ARV
		     treated patient"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Cambodia"
		     /collection_date="28-Mar-2006"
		     /note="genotype: CRF01_AE"
     gene	     <1..>651
		     /gene="pol"
     CDS	     <1..>651
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="AGX83866.1"
		     /db_xref="GI:550076466"
		     /translation="QWPLTEEKIKALTEICEEMEKEGKISKIGPENPYNTPXFAIKRK
		     HGXKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPLDENF
		     RKYTAFTIPSTNNETTGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEIVICQ
		     YMDDLYVGSDLEIKQHRIKVEELRAHLASWGLTTPXEKYQKEPPFRWMGYXLHPDKW"
BASE COUNT	260 a	 102 c	  133 g    152 t      4 other
ORIGIN
       1 cagtggccat tgacagaaga aaaaataaaa gcattaacag aaatttgtga agagatggaa 
      61 aaggaaggaa aaatttcaaa aattgggcct gaaaatccat ataatacccc artatttgct 
     121 ataaagagaa agcatggtrc caaatggagg aaattagtag atttcagaga gctcaataaa 
     181 agaactcagg atttttggga agttcaatta ggaataccgc atccagcagg tttaaaaaag 
     241 aataaatcag taacagtact agatgtggga gatgcatatt tttcagttcc tttagatgaa 
     301 aactttagaa agtatactgc attcaccata cctagtacaa acaatgagac aacaggaatc 
     361 agatatcagt acaatgtgct gccacaggga tggaaaggat caccagcaat attccagagt 
     421 agcatgacaa aaattttaga gccctttaga ataaaaaatc cagaaatagt tatctgtcaa 
     481 tacatggatg acttgtatgt aggatctgat ttagaaataa aacagcacag aataaaagta 
     541 gaagagctaa gagctcatct agcaagctgg gggcttacta caccagamga aaagtatcag 
     601 aaagaacctc cattccgttg gatgggatat gawctccatc ctgacaaatg g
//
last modified: Tue May 31 10:56 2022


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