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LOCUS KC791293 1070 bp RNA linear VRL 12-JUN-2013
DEFINITION HIV-1 isolate R74074 from Thailand pol protein (pol) gene, partial
cds
ACCESSION KC791293
VERSION KC791293.1 GI:510948735
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1070)
Show all sequences for reference 1
AUTHORS Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
TITLE Comparisons of Primary HIV-1 Drug Resistance between Recent and
Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
Patients.
JOURNAL PLoS. One.. 8(6); e62057 (2013)
PUBMED 23826076
REFERENCE 2 (bases 1 to 1070)
Show all sequences for reference 2
AUTHORS Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1070
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="R74074"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Thailand"
/collection_date="04-Jun-2009"
gene <1..>1070
/gene="pol"
CDS <1..>1070
/gene="pol"
/note="contains protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AGN54145.1"
/db_xref="GI:510948736"
/translation="PQITLWQRPLVPVKIGGQLKEALLDTGADDTVLEDINLPGKWKP
KMIGGIGGFIKVRQYDQIPIEICGKXAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
PIDTXPVKLKPGMDGPRVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTXILEPFRIKNPE
MVIYQYMDDLYVGSDLEIGQHRIKIEELRKHLLSWGFTTPDKKHQKEPPFLWMGYELH
PDRWTVQPIELPEKDSWTVNDI"
BASE COUNT 413 a 171 c 224 g 249 t 13 other
ORIGIN
1 cctcaaatca ctctttggca acgacccctt gtcccagtaa aaataggagg acagytgaaa
61 gaagctctat tagatacagg agcagatgat acagtattag aagatataaa tttaccagga
121 aaatggaaac caaaaatgat agggggaatt ggagggttta tcaaagtaag gcaatatgat
181 cagataccta tagaaatttg tggaaaaarg gctataggta cagtrttagt aggacctaca
241 cctgtcaaca tcattggacg aaayatgttg actcagattg ggtgtacttt aaatttccca
301 attagtccta ttgacactrt accagtaaaa ttaaagccag gaatggatgg accaagggtt
361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagaaatttg taaagagatg
421 gaagaggaag graaaatmtc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gctataaaga aaaaggacag caccaaatgg aggaaattag tagatttcag agaactcaat
541 aaaagaactc aggayttttg ggaagttcaa ttaggaatac crcatccagc aggtttaaaa
601 aagaaaaaat cagtaacagt acttgatgtg ggagatgcat atttttcagt tcctttagat
661 gaaagcttta gaaagtatac tgcattyacc atacctagta taaacaatga gacaccagga
721 atyagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag
781 agtagcatga caaraatctt agagcccttt agaataaaga atccagaaat ggttatctat
841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaataaaa
901 atagaggaac taagraagca tctattgagc tggggattta ctacaccaga caaaaagcat
961 cagaaggaac ctccattcct ttggatgggg tatgaactcc atcctgacag atggacagtc
1021 cagcctatag aactgccaga aaaagacagc tggactgtca atgatataca
//
last modified: Tue May 31 10:56 2022