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LOCUS	    KC791265		    1078 bp    RNA     linear	VRL 12-JUN-2013
DEFINITION  HIV-1 isolate R74045 from Thailand pol protein (pol) gene, partial
	    cds
ACCESSION   KC791265
VERSION     KC791265.1 GI:510948679
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1078)
            Show all sequences for reference 1
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Comparisons of Primary HIV-1 Drug Resistance between Recent and
	    Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
	    Patients.
  JOURNAL   PLoS. One.. 8(6); e62057 (2013)
  PUBMED    23826076
REFERENCE   2 (bases 1 to 1078)
            Show all sequences for reference 2
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
	    Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT     ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
	    sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..1078
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="R74045"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Thailand"
		     /collection_date="05-Feb-2009"
     gene	     <1..>1078
		     /gene="pol"
     CDS	     <1..>1078
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AGN54117.1"
		     /db_xref="GI:510948680"
		     /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIDTVPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
		     MVIYQYMDDLYVGSDLEIGQHRTKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELH
		     PDRWTVQPIELPEKDSWTVNDIQKL"
BASE COUNT	418 a	 170 c	  224 g    256 t     10 other
ORIGIN
       1 cctcaaatca ctctttggca acgaccmctt gtcacagtaa aaataggagg gcagctgaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagatataaa tttgccaggr 
     121 aartggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat 
     181 cagatactta tagaaatttg tggaaaaaag gctataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggamg aaatatgttg actcagattg gttgtacttt aaatttccca 
     301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg accaaaggtt 
     361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagaaatttg taaagagatg 
     421 gaagaggaag gaaaaatttc aaaaattggg cctgaraatc catacaatac tccagtattt 
     481 gctataaaga aaaargacag taccaaatgg agaaaattag tagatttcag agagctcaat 
     541 aaaagaactc aggatttttg ggaagttcaa ttaggaatac cgcatccagc aggtttaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcctttagat 
     661 gaaagcttta gaaagtatac tgcattcacc atacctagta taaacaatga racaccagga 
     721 atcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag 
     781 agtagcatga caaaaatctt agagcccttt agaataaaaa atccagaaat ggttatytac 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaacaaaa 
     901 atagaggagc taagagctca tctattgagc tggggattta ctacaccaga caaaaarcat 
     961 cagaaggaac cyccattcct ttggatggga tatgaactcc atcctgatag atggacagtc 
    1021 cagcctatag aactgccaga aaaagacagc tggactgtca atgatataca gaaattag
//
last modified: Tue May 31 10:56 2022


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