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LOCUS KC791260 1089 bp RNA linear VRL 12-JUN-2013
DEFINITION HIV-1 isolate R74040 from Thailand pol protein (pol) gene, partial
cds
ACCESSION KC791260
VERSION KC791260.1 GI:510948669
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1089)
Show all sequences for reference 1
AUTHORS Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
TITLE Comparisons of Primary HIV-1 Drug Resistance between Recent and
Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
Patients.
JOURNAL PLoS. One.. 8(6); e62057 (2013)
PUBMED 23826076
REFERENCE 2 (bases 1 to 1089)
Show all sequences for reference 2
AUTHORS Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1089
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="R74040"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Thailand"
/collection_date="22-Jan-2009"
gene <1..>1089
/gene="pol"
CDS <1..>1089
/gene="pol"
/note="contains protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AGN54112.1"
/db_xref="GI:510948670"
/translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKP
KMIGGIGGFIKVRQYDQVHIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
PIDTVPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
MVIYQYMDDLYVGSDLEIGQHRAKIEELRAHLLNWGFTTPDKKHQKEPPFLWMGYELH
PDRWTVQPIELPEKDSWTVNDIQKLVGKL"
BASE COUNT 425 a 174 c 231 g 258 t 1 other
ORIGIN
1 cctcaaatca ctctttggca acgacccctt gtcacagtaa aaataggagg acaactgaaa
61 gaggctctat tagatacagg agcagatgat acagtattag aagatataaa tttgccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat
181 caagtacata tagaaatttg tggaaaaaag gctataggta cagtgttagt aggacctaca
241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttccca
301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg gccaaaggtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg taaagagatg
421 gaagaggaag gaaaaatctc aaaaattggg cctgaaaacc catacaatac tccagtattt
481 gctataaaga aaaaggacag caccaaatgg aggaaattag tagatttcag agagctcaat
541 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cacatccagc aggtttaaaa
601 aagaaaaaat cagtaacagt gttagatgtg ggagatgcat atttttcagt tcctttagat
661 gaaagcttta gaaagtatac tgcattcacc atacctagta taaacaatga gacacccgga
721 atcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag
781 agtagcatga caaaaatttt agagcctttt agaataaaaa acccagaaat ggttatctat
841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagagcaaaa
901 atagaggagt tgagagctca tctattgaac tggggattta ctacaccaga caaaaagcat
961 cagaaggaac ctccattcct ttggatggga tatgaactcc atcctgacag atggacagtc
1021 cagcctatag aaytgccaga aaaagatagc tggactgtca atgatataca gaaattagtg
1081 ggaaaacta
//
last modified: Tue May 31 10:56 2022