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LOCUS	    KC791260		    1089 bp    RNA     linear	VRL 12-JUN-2013
DEFINITION  HIV-1 isolate R74040 from Thailand pol protein (pol) gene, partial
	    cds
ACCESSION   KC791260
VERSION     KC791260.1 GI:510948669
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1089)
            Show all sequences for reference 1
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Comparisons of Primary HIV-1 Drug Resistance between Recent and
	    Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
	    Patients.
  JOURNAL   PLoS. One.. 8(6); e62057 (2013)
  PUBMED    23826076
REFERENCE   2 (bases 1 to 1089)
            Show all sequences for reference 2
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
	    Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT     ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
	    sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..1089
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="R74040"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Thailand"
		     /collection_date="22-Jan-2009"
     gene	     <1..>1089
		     /gene="pol"
     CDS	     <1..>1089
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AGN54112.1"
		     /db_xref="GI:510948670"
		     /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQVHIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIDTVPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
		     MVIYQYMDDLYVGSDLEIGQHRAKIEELRAHLLNWGFTTPDKKHQKEPPFLWMGYELH
		     PDRWTVQPIELPEKDSWTVNDIQKLVGKL"
BASE COUNT	425 a	 174 c	  231 g    258 t      1 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcacagtaa aaataggagg acaactgaaa 
      61 gaggctctat tagatacagg agcagatgat acagtattag aagatataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat 
     181 caagtacata tagaaatttg tggaaaaaag gctataggta cagtgttagt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttccca 
     301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg gccaaaggtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg taaagagatg 
     421 gaagaggaag gaaaaatctc aaaaattggg cctgaaaacc catacaatac tccagtattt 
     481 gctataaaga aaaaggacag caccaaatgg aggaaattag tagatttcag agagctcaat 
     541 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cacatccagc aggtttaaaa 
     601 aagaaaaaat cagtaacagt gttagatgtg ggagatgcat atttttcagt tcctttagat 
     661 gaaagcttta gaaagtatac tgcattcacc atacctagta taaacaatga gacacccgga 
     721 atcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag 
     781 agtagcatga caaaaatttt agagcctttt agaataaaaa acccagaaat ggttatctat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagagcaaaa 
     901 atagaggagt tgagagctca tctattgaac tggggattta ctacaccaga caaaaagcat 
     961 cagaaggaac ctccattcct ttggatggga tatgaactcc atcctgacag atggacagtc 
    1021 cagcctatag aaytgccaga aaaagatagc tggactgtca atgatataca gaaattagtg 
    1081 ggaaaacta
//
last modified: Tue May 31 10:56 2022


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