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LOCUS KC791258 1076 bp RNA linear VRL 12-JUN-2013
DEFINITION HIV-1 isolate R74038 from Thailand pol protein (pol) gene, partial
cds
ACCESSION KC791258
VERSION KC791258.1 GI:510948665
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1076)
Show all sequences for reference 1
AUTHORS Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
TITLE Comparisons of Primary HIV-1 Drug Resistance between Recent and
Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
Patients.
JOURNAL PLoS. One.. 8(6); e62057 (2013)
PUBMED 23826076
REFERENCE 2 (bases 1 to 1076)
Show all sequences for reference 2
AUTHORS Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1076
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="R74038"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Thailand"
/collection_date="08-Jan-2009"
gene <1..>1076
/gene="pol"
CDS <1..>1076
/gene="pol"
/note="contains protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AGN54110.1"
/db_xref="GI:510948666"
/translation="PQITLWQRPIVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKP
KMIGGIGGFIKVRQYDQIVIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
PIDTIPVTLKPGMDGPKIKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLLDFRELNKRTQDFWEVQLGIPHPAGLKKXKSVTVLDVGDAYFSVP
LDENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRLKNPE
MVIYQYMDDLYVGSDLEIGQHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELH
PDRWTVQPIELPEKDSWTVNDIQK"
BASE COUNT 413 a 170 c 223 g 257 t 13 other
ORIGIN
1 cctcaaatca ctctttggca acgacccatt gtcacagtaa aaataggagg acagctraaa
61 gaagctctat tagatacagg agcagatgat acagtgttag aagatataaa tttgccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat
181 cagatagtta tagaaatttg tggaaaaaag gctataggta cagtgttagt aggacctaca
241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttccca
301 attagtccta ttgacactat accagtaaca ttaaagccag gaatggatgg accaaagatt
361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagaaatctg taaagagatg
421 gaagaggaag gaaaaatctc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gctataaaga aaaaggayag caccaaatgg aggaagttat tagatttcag agarctcaat
541 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cacatccagc aggtttaaaa
601 aagaamaaat cagtaacagt actagatgtg ggrgatgcat atttttcagt tcctttagat
661 gaaaacttta gaaartatac tgcattcacc atacctagta taaacaatga gacaccagga
721 atcagatatc agtacaatgt gytgccacag ggatggaaag ggtcaccagc aatattccag
781 agtagcatga caaaaatctt agagcctttt agactaaaaa atccagagat ggttatctat
841 caatacatgg atgayttgta tgtaggatct gatttagaaa tagggcagca cagagcaaaa
901 atagaggagt tragrgctca tctattgagc tggggattta ctactccaga caaaaagcay
961 cagaargaac ctccattcct ttggatggga tatgaactcc atcctgacag rtggacagtc
1021 cagcctatag aactgccaga aaaagatagc tggactgtca atgatataca gaaatt
//
last modified: Tue May 31 10:56 2022