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LOCUS	    KC791258		    1076 bp    RNA     linear	VRL 12-JUN-2013
DEFINITION  HIV-1 isolate R74038 from Thailand pol protein (pol) gene, partial
	    cds
ACCESSION   KC791258
VERSION     KC791258.1 GI:510948665
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1076)
            Show all sequences for reference 1
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Comparisons of Primary HIV-1 Drug Resistance between Recent and
	    Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
	    Patients.
  JOURNAL   PLoS. One.. 8(6); e62057 (2013)
  PUBMED    23826076
REFERENCE   2 (bases 1 to 1076)
            Show all sequences for reference 2
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
	    Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT     ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
	    sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..1076
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="R74038"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Thailand"
		     /collection_date="08-Jan-2009"
     gene	     <1..>1076
		     /gene="pol"
     CDS	     <1..>1076
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AGN54110.1"
		     /db_xref="GI:510948666"
		     /translation="PQITLWQRPIVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQIVIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIDTIPVTLKPGMDGPKIKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLLDFRELNKRTQDFWEVQLGIPHPAGLKKXKSVTVLDVGDAYFSVP
		     LDENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRLKNPE
		     MVIYQYMDDLYVGSDLEIGQHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELH
		     PDRWTVQPIELPEKDSWTVNDIQK"
BASE COUNT	413 a	 170 c	  223 g    257 t     13 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccatt gtcacagtaa aaataggagg acagctraaa 
      61 gaagctctat tagatacagg agcagatgat acagtgttag aagatataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat 
     181 cagatagtta tagaaatttg tggaaaaaag gctataggta cagtgttagt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttccca 
     301 attagtccta ttgacactat accagtaaca ttaaagccag gaatggatgg accaaagatt 
     361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagaaatctg taaagagatg 
     421 gaagaggaag gaaaaatctc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaggayag caccaaatgg aggaagttat tagatttcag agarctcaat 
     541 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cacatccagc aggtttaaaa 
     601 aagaamaaat cagtaacagt actagatgtg ggrgatgcat atttttcagt tcctttagat 
     661 gaaaacttta gaaartatac tgcattcacc atacctagta taaacaatga gacaccagga 
     721 atcagatatc agtacaatgt gytgccacag ggatggaaag ggtcaccagc aatattccag 
     781 agtagcatga caaaaatctt agagcctttt agactaaaaa atccagagat ggttatctat 
     841 caatacatgg atgayttgta tgtaggatct gatttagaaa tagggcagca cagagcaaaa 
     901 atagaggagt tragrgctca tctattgagc tggggattta ctactccaga caaaaagcay 
     961 cagaargaac ctccattcct ttggatggga tatgaactcc atcctgacag rtggacagtc 
    1021 cagcctatag aactgccaga aaaagatagc tggactgtca atgatataca gaaatt
//
last modified: Tue May 31 10:56 2022


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