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LOCUS KC791229 1101 bp RNA linear VRL 12-JUN-2013
DEFINITION HIV-1 isolate R74009 from Thailand pol protein (pol) gene, partial
cds
ACCESSION KC791229
VERSION KC791229.1 GI:510948607
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1101)
Show all sequences for reference 1
AUTHORS Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
TITLE Comparisons of Primary HIV-1 Drug Resistance between Recent and
Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
Patients.
JOURNAL PLoS. One.. 8(6); e62057 (2013)
PUBMED 23826076
REFERENCE 2 (bases 1 to 1101)
Show all sequences for reference 2
AUTHORS Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
TITLE Direct Submission
JOURNAL Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1101
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="R74009"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Thailand"
/collection_date="13-Nov-2008"
gene <1..>1101
/gene="pol"
CDS <1..>1101
/gene="pol"
/note="contains protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AGN54081.1"
/db_xref="GI:510948608"
/translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEINLPGKWKP
KMIGGIGGFIKVRQYDQIPIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
PIDTVPVTLKPGMDGPKVKQWPLTEEKIKALTEICNEMEKEGKISKIGPENPYNTPIF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDEXFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQXSMTXILEPFRIKNPE
MVIYQYMDDLYVGSDLEIXQHRXKIEELRAHLMSWGFTTPDKKHQKEPPFLWMGYELH
PDRWTVQPIELPEKDSWTVNDIQKLVGKLNWAS"
BASE COUNT 432 a 174 c 226 g 258 t 11 other
ORIGIN
1 cctcaaatca ctctttggca acgacctctt gtcacagtaa aaataggagg acagctaaaa
61 gaagctctat tagatacagg agcagatgat acagtattag aagarataaa tttgccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaggtaag gcaatatgat
181 cagataccta tagaaatttg tggaaaaaag gctataggta cagtrttagt aggacctaca
241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttccca
301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg accaaaggtt
361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagaaatttg taaygagatg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt
481 gctataaaga aaaaggacag caccaaatgg agaaaattag tagatttcag agaactyaat
541 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cacatccagc aggtttaaaa
601 aagaaaaaat cagtaacagt actagatgtg ggagatgcat atttttcagt tcctttagat
661 gaaaryttta gaaagtatac tgcatttacc atacctagta caaataatga gacaccagga
721 gtcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag
781 astagcatga caaraatctt agagcccttt agaataaaaa atccagaaat ggtcatctat
841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagrgcagca cagarcaaaa
901 atagaagagc taagagctca tctaatgagc tgggggttta ctacaccaga caaaaagcat
961 cagaaggaac ctccattcct ttggatggga tatgaactcc atcctgacag atggacagts
1021 cagcctatag aactaccaga aaaggacagc tggactgtca atgatataca gaaattagtg
1081 ggaaaactaa attgggcaag t
//
last modified: Tue May 31 10:56 2022