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LOCUS	    KC791229		    1101 bp    RNA     linear	VRL 12-JUN-2013
DEFINITION  HIV-1 isolate R74009 from Thailand pol protein (pol) gene, partial
	    cds
ACCESSION   KC791229
VERSION     KC791229.1 GI:510948607
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1101)
            Show all sequences for reference 1
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Comparisons of Primary HIV-1 Drug Resistance between Recent and
	    Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
	    Patients.
  JOURNAL   PLoS. One.. 8(6); e62057 (2013)
  PUBMED    23826076
REFERENCE   2 (bases 1 to 1101)
            Show all sequences for reference 2
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
	    Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT     ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
	    sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..1101
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="R74009"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Thailand"
		     /collection_date="13-Nov-2008"
     gene	     <1..>1101
		     /gene="pol"
     CDS	     <1..>1101
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AGN54081.1"
		     /db_xref="GI:510948608"
		     /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEINLPGKWKP
		     KMIGGIGGFIKVRQYDQIPIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIDTVPVTLKPGMDGPKVKQWPLTEEKIKALTEICNEMEKEGKISKIGPENPYNTPIF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDEXFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQXSMTXILEPFRIKNPE
		     MVIYQYMDDLYVGSDLEIXQHRXKIEELRAHLMSWGFTTPDKKHQKEPPFLWMGYELH
		     PDRWTVQPIELPEKDSWTVNDIQKLVGKLNWAS"
BASE COUNT	432 a	 174 c	  226 g    258 t     11 other
ORIGIN
       1 cctcaaatca ctctttggca acgacctctt gtcacagtaa aaataggagg acagctaaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagarataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaggtaag gcaatatgat 
     181 cagataccta tagaaatttg tggaaaaaag gctataggta cagtrttagt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttccca 
     301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg accaaaggtt 
     361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagaaatttg taaygagatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt 
     481 gctataaaga aaaaggacag caccaaatgg agaaaattag tagatttcag agaactyaat 
     541 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cacatccagc aggtttaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggagatgcat atttttcagt tcctttagat 
     661 gaaaryttta gaaagtatac tgcatttacc atacctagta caaataatga gacaccagga 
     721 gtcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag 
     781 astagcatga caaraatctt agagcccttt agaataaaaa atccagaaat ggtcatctat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagrgcagca cagarcaaaa 
     901 atagaagagc taagagctca tctaatgagc tgggggttta ctacaccaga caaaaagcat 
     961 cagaaggaac ctccattcct ttggatggga tatgaactcc atcctgacag atggacagts 
    1021 cagcctatag aactaccaga aaaggacagc tggactgtca atgatataca gaaattagtg 
    1081 ggaaaactaa attgggcaag t
//
last modified: Tue May 31 10:56 2022


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