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LOCUS	    KC203158		     680 bp    RNA     linear	VRL 19-FEB-2013
DEFINITION  HIV-1 isolate 2011.ANHUI.XCg51 from China gag protein (gag) gene,
	    partial cds
ACCESSION   KC203158
VERSION     KC203158.1 GI:451317296
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 680)
            Show all sequences for reference 1
  AUTHORS   Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R. and Su,B.
  TITLE     New Emerging Recombinant HIV-1 Strains and Close Transmission
	    Linkage of HIV-1 Strains in the Chinese MSM Population Indicate a
	    New Epidemic Risk
  JOURNAL   PLoS ONE 8 (1), E54322 (2013)
  PUBMED    23372706
REFERENCE   2 (bases 1 to 680)
            Show all sequences for reference 2
  AUTHORS   Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R., Hna,R. and
	    Su,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2012) Anhui Provincial Center for Disease Control
	    and Prevention, Hefei, Anhui 230032, China
COMMENT     ##Assembly-Data-START## Assembly Method Seuqncher v. 5 Sequencing
	    Technology Sanger dideoxy sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..680
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="2011.ANHUI.XCg51"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="2011"
		     /note="genotype: CRF01_AE"
     gene	     <1..>680
		     /gene="gag"
     CDS	     <1..>680
		     /gene="gag"
		     /codon_start="2"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AGF35400.1"
		     /db_xref="GI:451317297"
		     /translation="LSGGKLDAWEKIRLRPGGKKKYRXKHIVWASRELEXFALNPGLL
		     ESAEGCQQJJEQLQXTLKTGSEELKSLFNLIVVLWCVHQRIEIXDTKEALDKLEEVQN
		     KSQQKTQQAAAGTGXSSKVSQNYPIVQNAQGQMVHQXVSPRTLNAWVKVVEEKGFNPE
		     VIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAADWDRTHPVQAGPIPP
		     GQIREPRG"
BASE COUNT	263 a	 119 c	  158 g    124 t     16 other
ORIGIN
       1 attaagtggg ggaaaattag atgcatggga gaaaattcgg ttacggccag ggggaaagaa 
      61 aaaatatagg atraaacata tagtatgggc aagcagggag ttggaaarat tcgcactyaa 
     121 ccctggyctg ttagaatcag cagaaggatg tcaacaamta wtagarcagt tacarycaac 
     181 tctcaagaca ggatcagaag aacttaaatc attatttaat ctaatagtag tcctttggtg 
     241 tgtacaccaa agratagaga taaragacac caaggaagct ttagataaac tagaggaagt 
     301 acaaaataag agccagcaaa agacacagca ggcagcagct ggcacaggaa rcagcagcaa 
     361 agtcagccaa aattacccta tagtacaaaa tgcacaaggg caaatggtac atcagyctgt 
     421 atcacctaga actttaaatg catgggtaaa agtagtagaa gaaaagggtt ttaacccaga 
     481 agtaataccc atgttctcag cattatcaga gggagccacc ccacaagatt taaatatgat 
     541 gytaaatata gtggggggac aycaggcagc aatgcaaatg ttaaargaaa ccatcaatga 
     601 agaagccgca gactgggata ggacacaccc agtacaggca ggacctattc caccaggcca 
     661 gataagggaa ccaaggggaa 
//
last modified: Tue May 31 10:56 2022


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