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LOCUS	    KC203139		     692 bp    RNA     linear	VRL 19-FEB-2013
DEFINITION  HIV-1 isolate 2011.ANHUI.HNg8 from China gag protein (gag) gene,
	    partial cds
ACCESSION   KC203139
VERSION     KC203139.1 GI:451317258
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 692)
            Show all sequences for reference 1
  AUTHORS   Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R. and Su,B.
  TITLE     New Emerging Recombinant HIV-1 Strains and Close Transmission
	    Linkage of HIV-1 Strains in the Chinese MSM Population Indicate a
	    New Epidemic Risk
  JOURNAL   PLoS ONE 8 (1), E54322 (2013)
  PUBMED    23372706
REFERENCE   2 (bases 1 to 692)
            Show all sequences for reference 2
  AUTHORS   Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R., Hna,R. and
	    Su,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2012) Anhui Provincial Center for Disease Control
	    and Prevention, Hefei, Anhui 230032, China
COMMENT     ##Assembly-Data-START## Assembly Method Seuqncher v. 5 Sequencing
	    Technology Sanger dideoxy sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..692
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="2011.ANHUI.HNg8"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="2011"
		     /note="genotype: CRF01_AE"
     gene	     <1..>692
		     /gene="gag"
     CDS	     <1..>692
		     /gene="gag"
		     /codon_start="2"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AGF35381.1"
		     /db_xref="GI:451317259"
		     /translation="SVLSGGKLDSWEKIRLRPGGKKKYRLKHLVWASRELERFALNPG
		     LLESAEGCQQIIEQLQPXXKTGSEELKSLYNTVVTLWCVHQRIXIKDTKEALDKMEEX
		     QTKSQQKTQQXAAGXGSSSKVSQNYPIVQNAQGQMVHQPITPRTLNAWVKVVEEKGFN
		     PEVIPMFAALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAADWDRTHPAQAGPF
		     PPGQIREPRGSD"
BASE COUNT	268 a	 125 c	  163 g    126 t     10 other
ORIGIN
       1 gtcagtatta agtgggggaa aattagattc atgggaaaaa attcggttac ggccaggggg 
      61 aaagaaaaaa tatagactaa aacatttagt atgggcaagc agggagytgg aaagattcgc 
     121 acttaaccct ggcctgttag aatcagcrga aggatgtcaa caaataatag aacagttaca 
     181 gccarctytc aagacaggat cagaagaact taagtcatta tacaatacag tagtaaccct 
     241 ttggtgtgta caccaaagga tagamataaa agacaccaag gaagctttag ataaaatgga 
     301 ggaagyacaa actaagagcc agcaaaagac acagcagrca gcagctggcr caggaagcag 
     361 tagcaaagtc agccaaaatt accctatagt gcaaaatgca caagggcaaa tggtacatca 
     421 gcctataaca cctagaactt taaatgcatg ggtaaaagta gtagaagaaa agggttttaa 
     481 tccagaagta atacccatgt tcgcagcatt atcagargga gccaccccac aagatttaaa 
     541 tatgatgcta aatatagtgg ggggacacca ggcagcaatg caaatgttaa aagaaaccat 
     601 caatgaagaa gctgcagatt gggatagrac acacccagca caggcagggc cttttccacc 
     661 aggccagata agggaaccaa ggggaagtga ca
//
last modified: Tue May 31 10:56 2022


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