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LOCUS	    KC203137		     681 bp    RNA     linear	VRL 19-FEB-2013
DEFINITION  HIV-1 isolate 2011.ANHUI.HNg5 from China gag protein (gag) gene,
	    partial cds
ACCESSION   KC203137
VERSION     KC203137.1 GI:451317254
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 681)
            Show all sequences for reference 1
  AUTHORS   Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R. and Su,B.
  TITLE     New Emerging Recombinant HIV-1 Strains and Close Transmission
	    Linkage of HIV-1 Strains in the Chinese MSM Population Indicate a
	    New Epidemic Risk
  JOURNAL   PLoS ONE 8 (1), E54322 (2013)
  PUBMED    23372706
REFERENCE   2 (bases 1 to 681)
            Show all sequences for reference 2
  AUTHORS   Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R., Hna,R. and
	    Su,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2012) Anhui Provincial Center for Disease Control
	    and Prevention, Hefei, Anhui 230032, China
COMMENT     ##Assembly-Data-START## Assembly Method Seuqncher v. 5 Sequencing
	    Technology Sanger dideoxy sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..681
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="2011.ANHUI.HNg5"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="2011"
		     /note="genotype: CRF01_AE"
     gene	     <1..>681
		     /gene="gag"
     CDS	     <1..>681
		     /gene="gag"
		     /codon_start="3"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AGF35379.1"
		     /db_xref="GI:451317255"
		     /translation="SGGKLDXWEKIRLRPGGKKKYRXKHLVWASRELERFALNPGLLE
		     SAEGCQQIIEQLQSXLKTGSEELKSLFNTVATLWCVHQRIDXKDTKEALDKIEEVQXK
		     SQQKTQQASAATGSSSKVSLNYPIVQNAQGQMVHQAVSPRTLNAWVKVVEEKGFNPEV
		     IPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAADWDRTHPVQAGPIPPG
		     QIREPRGS"
BASE COUNT	263 a	 118 c	  162 g    129 t      9 other
ORIGIN
       1 taagtggggg aaaattagat rcatgggaaa aaattcggtt acggccaggg ggaaagaaaa 
      61 aatataggmt gaaacattta gtatgggcaa gcagggagtt agaaagattc gcacttaacc 
     121 ctggcctgtt agaatcagca gaaggatgtc arcaaataat agaacagtta caatcaamtc 
     181 ttaagacagg atcagaagaa cttaaatcat tatttaatac agtagcaacc ctttggtgtg 
     241 tacaycaaag gatagatrta aaagacacca aggaagcttt agataaaata gaggaagtac 
     301 aaaakaagag ccagcaaaag acacagcagg catcagctgc cacaggaagc agcagcaagg 
     361 tcagcctaaa ttaccctata gtgcaaaatg cacaagggca aatggtacat caggctgtat 
     421 cacctagrac tttaaatgca tgggtaaaag tagtagaaga aaagggtttt aacccagaag 
     481 taatacccat gttctcagca ttatcagagg gagccacccc acaagattta aatatgatgc 
     541 taaatatagt ggggggacay caggcagcaa tgcaaatgtt aaaagaaacc atcaatgaag 
     601 aagctgcaga ttgggatagg acacacccag tacaggcagg gcctattcca ccaggccaga 
     661 taagggaacc aaggggaagt g
//
last modified: Tue May 31 10:56 2022


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