View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS KC133255 1427 bp DNA linear VRL 19-AUG-2013
DEFINITION HIV-1 isolate W48Guayo from Venezuela Pol protein (pol) gene,
partial cds
ACCESSION KC133255
VERSION KC133255.1 GI:530659904
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1427)
Show all sequences for reference 1
AUTHORS Villalba,J.A., Bello,G., Maes,M., Sulbaran,Y.F., Garzaro,D.,
Loureiro,C.L., Rangel,H.R., de Waard,J.H. and Pujol,F.H.
TITLE HIV-1 epidemic in Warao Amerindians from Venezuela: spatial
phylodynamics and epidemiological patterns
JOURNAL AIDS 27 (11), 1783-1791 (2013)
PUBMED 23435304
REFERENCE 2 (bases 1 to 1427)
Show all sequences for reference 2
AUTHORS Villalba,J.A., Bello,G., Maes,M., Sulbaran,Y.F., Garzaro,D.,
Loureiro,C.L., Rangel,H.R., de Waard,J.H. and Pujol,F.H.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2012) Centro de Microbiologia y Biologia Celular,
Laboratorio de Virologia Molecular, Instituto Venezolano de
Investigaciones Cientificas, Km 11, Carretera Panamericana, Altos
De Pipe, Miranda 1020-A, Caracas-Venezuela
FEATURES Location/Qualifiers
source 1..1427
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="W48Guayo"
/isolation_source="whole blood"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Venezuela"
/collection_date="2011"
/note="subtype: B"
gene <1..>1427
/gene="pol"
CDS <1..>1427
/gene="pol"
/codon_start="3"
/transl_table="1"
/product="Pol protein"
/protein_id="AGT38330.1"
/db_xref="GI:530659905"
/translation="QGKAREFSSEQTRANSPTRRELQVWGXDNNSPSEAGADRQGAVS
FNLPQITLWQRPLVXIRIGGQIKEALLDTGADDTVLEEIBLPGRWKPKMIGGIGGFIK
VRZYXQIXIEICGHKAVGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKP
GMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWR
KLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKEFRKYTAF
TIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLY
VGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVL
PXXXSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTEVISLTEEAELELA
ENREILREPVHGVYYDPSKDLIAEI"
BASE COUNT 546 a 245 c 308 g 313 t 15 other
ORIGIN
1 cacaagggaa ggccagggaa ttttcttcag aacagaccag agccaacagc cccaccagaa
61 gagagcttca ggtttgggga rgagacaaca actccccctc agaagcmggg gccgatagac
121 aaggagctgt atcctttaac ctccctcaga tcactctttg gcaacgaccc ctcgtcmcaa
181 taagaatagg ggggcarata aaagaagctc tattagatac aggagcagat gatacagtgt
241 tagaagaaat aratttgcca ggaagatgga aaccaaaaat gataggagga attggaggtt
301 ttatcaaagt aagasagtat gakcagatay ccatagaaat ctgtggccat aaagctgtag
361 gtacagtatt agtaggaccc acacctgtca acataattgg aagaaatctg ttgactcaga
421 ttgggtgcac tttaaatttt cctattagtc ctattgaaac tgtaccagta aaattaaagc
481 crggaatgga tggcccaagg gtcaaacaat ggccattgac agaagaaaaa ataaaagcat
541 tagtagaaat ttgtacagaa atggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa
601 atccatacaa tactccagta tttgccataa agaaaaaaga cagtactaaa tggagaaaat
661 tagtagattt tagagaactt aataagagaa ctcaagactt ctgggaagtc caattaggga
721 taccacatcc tgcagggtta aaaaagaaaa aatcagtaac agtattagat gtgggtgatg
781 catatttttc agttccctta gataaagaat tcaggaaata tactgcattt accataccta
841 gcacaaacaa tgaaacacca gggattagat atcagtacaa tgtgcttcca cagggatgga
901 aaggatcacc agcaatattt caaagtagca tgacaaaaat cttagagcct tttaggaaac
961 aaaatccaga catagttatc tatcaataca tggatgattt atatgtagga tctgacttag
1021 aaatagggca acatagaaca aaaatagaag aactgagaca gcatctgttg aggtgggggt
1081 tgaccacacc agacaaaaaa catcagaaag agcctccatt cctttggatg ggttatgaac
1141 tccatcctga taaatggaca gtacaaccta tagtgctgcc agammaggam agctggactg
1201 tcaatgatat acaraagtta gtgggaaaat tgaattgggc aagtcaaatt tacgcaggga
1261 tyaaagtaaa gcaattatgc aaactcctta ggggaaccaa agcgctaaca gaagtaatat
1321 cactracaga agaagcagaa ctagagctgg cagagaacag ggagattcta agagaaccag
1381 tacatggagt gtattatgac ccatcaaaag acttaatagc agaaata
//
last modified: Tue May 31 10:56 2022