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LOCUS KC133228 1427 bp DNA linear VRL 19-AUG-2013
DEFINITION HIV-1 isolate W17Guayo from Venezuela Pol protein (pol) gene,
partial cds
ACCESSION KC133228
VERSION KC133228.1 GI:530659808
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1427)
Show all sequences for reference 1
AUTHORS Villalba,J.A., Bello,G., Maes,M., Sulbaran,Y.F., Garzaro,D.,
Loureiro,C.L., Rangel,H.R., de Waard,J.H. and Pujol,F.H.
TITLE HIV-1 epidemic in Warao Amerindians from Venezuela: spatial
phylodynamics and epidemiological patterns
JOURNAL AIDS 27 (11), 1783-1791 (2013)
PUBMED 23435304
REFERENCE 2 (bases 1 to 1427)
Show all sequences for reference 2
AUTHORS Villalba,J.A., Bello,G., Maes,M., Sulbaran,Y.F., Garzaro,D.,
Loureiro,C.L., Rangel,H.R., de Waard,J.H. and Pujol,F.H.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2012) Centro de Microbiologia y Biologia Celular,
Laboratorio de Virologia Molecular, Instituto Venezolano de
Investigaciones Cientificas, Km 11, Carretera Panamericana, Altos
De Pipe, Miranda 1020-A, Caracas-Venezuela
FEATURES Location/Qualifiers
source 1..1427
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="W17Guayo"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Venezuela"
/collection_date="2011"
/note="subtype: B"
gene <1..>1427
/gene="pol"
CDS <1..>1427
/gene="pol"
/codon_start="3"
/transl_table="1"
/product="Pol protein"
/protein_id="AGT38303.1"
/db_xref="GI:530659809"
/translation="QGKAREFSSEQTRANSPTRRELQVGGRDNNSPSEAGANRQGSVS
FNLPQITLWQRPLVPIRIGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIK
VRQYDQIPIEICGHKAVGTVLVGPTPVNIIGRNLLTKIGCTLNFPISPIETVPVKLKP
GMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWR
KLVDFRELNKRTQDFWEVQLGIPHPAGLKQNKSVTVLDVGDAYFSVPLDKEFRKYTAF
TIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPDIVIYQYMDDLY
VGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEHPFLWMGYELHPDKWTVQPIVL
PEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTEVIPLTEEAELELA
ENREILREPVHGVYYDPSKDLIAEI"
BASE COUNT 551 a 254 c 310 g 312 t
ORIGIN
1 cacaagggaa ggccagggaa ttttcttcag aacagaccag agccaacagc cccaccagaa
61 gagagcttca ggttggggga agagacaaca actccccctc agaagcaggg gccaatagac
121 aaggatctgt atcctttaac ctccctcaga tcactctttg gcaacgaccc ctcgtcccaa
181 taaggatagg ggggcagata aaagaagctc tattagatac aggagcagat gatacagtat
241 tagaagaaat aaatttgcca ggaaaatgga aaccaaaaat gataggagga attggaggtt
301 ttatcaaagt aagacagtat gatcagatac ccatagaaat ctgtggccat aaagctgtag
361 gtacagtatt agtaggaccc acacctgtca acataattgg gagaaatctg ttgactaaga
421 ttgggtgcac tttaaatttt cctattagtc ctattgaaac tgtaccagta aaattaaagc
481 caggaatgga tggcccaaga gtcaaacaat ggccattgac agaagagaaa ataaaagcat
541 tagtagaaat ttgtacagaa atggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa
601 atccatacaa tactccagta tttgccataa agaaaaaaga cagtactaaa tggagaaagc
661 tagtagattt tagagaactt aataagagaa ctcaagactt ttgggaagtc caattaggga
721 taccacatcc tgcagggtta aaacagaaca aatcagtaac agtgttagat gtgggtgatg
781 catatttttc agtcccctta gataaagaat tcaggaaata tactgcattt accataccta
841 gcacaaacaa tgaaacacca gggattagat atcagtacaa tgtgcttcca cagggatgga
901 aaggatcacc agcaatattt caaagtagca tgataaaaat cttagagcct tttaggaaac
961 aaaacccaga catagttatc tatcaataca tggatgattt atatgtagga tctgacttag
1021 aaatagggca acatagaaca aaaatagaag aactgagaca gcacctgttg aggtgggggt
1081 tgaccacacc agacaaaaaa catcagaaag aacatccttt cctttggatg ggttatgaac
1141 tccatcctga taaatggaca gtacaaccta tagtgctgcc agaaaaggac agctggactg
1201 tcaatgacat acaaaagtta gtgggaaaat tgaattgggc aagtcagatt tacgcaggga
1261 ttaaagtaaa gcaattatgc aaactcctta ggggaaccaa agcactaaca gaagtaatac
1321 cactcacaga agaagcagaa ctagaactgg cagagaacag ggagattcta agagagccag
1381 tacatggagt gtattatgac ccgtcaaaag acttaatagc agaaata
//
last modified: Tue May 31 10:56 2022