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LOCUS KC133215 1428 bp DNA linear VRL 19-AUG-2013
DEFINITION HIV-1 isolate W4SanFranciscodeGuayo from Venezuela Pol protein
(pol) gene, partial cds
ACCESSION KC133215
VERSION KC133215.1 GI:530659781
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1428)
Show all sequences for reference 1
AUTHORS Villalba,J.A., Bello,G., Maes,M., Sulbaran,Y.F., Garzaro,D.,
Loureiro,C.L., Rangel,H.R., de Waard,J.H. and Pujol,F.H.
TITLE HIV-1 epidemic in Warao Amerindians from Venezuela: spatial
phylodynamics and epidemiological patterns
JOURNAL AIDS 27 (11), 1783-1791 (2013)
PUBMED 23435304
REFERENCE 2 (bases 1 to 1428)
Show all sequences for reference 2
AUTHORS Villalba,J.A., Bello,G., Maes,M., Sulbaran,Y.F., Garzaro,D.,
Loureiro,C.L., Rangel,H.R., de Waard,J.H. and Pujol,F.H.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2012) Centro de Microbiologia y Biologia Celular,
Laboratorio de Virologia Molecular, Instituto Venezolano de
Investigaciones Cientificas, Km 11, Carretera Panamericana, Altos
De Pipe, Miranda 1020-A, Caracas-Venezuela
FEATURES Location/Qualifiers
source 1..1428
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="W4SanFranciscodeGuayo"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Venezuela"
/collection_date="2011"
/note="subtype: B"
gene <1..>1428
/gene="pol"
CDS <1..>1428
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="Pol protein"
/protein_id="AGT38291.1"
/db_xref="GI:530659782"
/translation="PQGEAREFSSEQTRANSPTRRELQVWGRDNNSPSEAGADRQGAV
SFNLPQITLWQRPLVPIRIGGQIKEALLDTGADDTVLEEIDLPGRWKPKMIGGIGGFI
KVRQYDQIPIEICGHKAVGTVLVGPTPVNIIGRNLLTKIGCTLNFPISPIETVPVKLK
PGMDGPRVKQWPLTEEKIKALXEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKW
RKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSITVLDVGDAYFSVPLDEEFRKYTA
FTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKHNPDIVIYQYMDDL
YVGSDLEIGQHRTKIEELRQHLLSWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIV
LPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTEVIPLTEEAELEL
AENREILREPVHGVYYDPSKDLIAEI"
BASE COUNT 553 a 252 c 305 g 315 t 3 other
ORIGIN
1 cchcaagggg aggccaggga attttcttca gaacagacca gagccaacag ccccaccaga
61 agagaacttc aggtttgggg aagagacaac aactccccct cagaagccgg rgccgataga
121 caaggggctg tatcctttaa cctccctcag atcactcttt ggcaacgacc cctcgtccca
181 ataaggatag gggggcaaat aaaagaagct ctattagata caggagcaga tgatacagta
241 ttagaagaaa tagatttgcc aggaagatgg aaaccaaaaa tgataggagg aattggaggt
301 tttatcaaag taagacagta tgatcagata cccatagaaa tctgtggcca taaagctgta
361 ggtacagtat tagtaggacc cacacctgtc aacataattg gaagaaatct gttgactaag
421 attgggtgca ctttaaattt tcctattagt cctattgaaa ctgtaccagt aaaattaaaa
481 ccaggaatgg atggcccaag agtcaaacaa tggccattga cagaagaaaa aataaaagca
541 ttaayagaaa tttgtacaga aatggaaaag gaaggaaaaa tttcaaagat tgggcctgaa
601 aatccataca atactccagt atttgccata aagaaaaaag acagtactaa atggagaaaa
661 ttagtagatt ttagagaact taataagaga actcaagact tctgggaagt ccaattaggg
721 ataccacatc ctgcagggtt aaaaaagaaa aaatcaataa cagtattaga tgtgggtgat
781 gcatattttt cagttccctt agatgaagaa ttcaggaaat atactgcatt taccatacct
841 agcacaaaca atgaaacacc agggattaga tatcagtaca atgtgcttcc acagggatgg
901 aaagggtcac cagcaatttt tcaaagtagc atgacaaaaa tcttagagcc ttttaggaaa
961 cacaatccag acatagttat ctatcaatac atggatgatt tatatgtagg atctgactta
1021 gaaatagggc aacatagaac aaaaatagaa gaattgaggc agcatctgtt gagttggggg
1081 ttaaccacac cagacaaaaa acatcagaaa gaacctccat tcctttggat gggttatgaa
1141 ctccatcctg ataaatggac agtacaacct atagtgctgc cagaaaagga cagctggact
1201 gtcaatgaca tacaaaagtt agtgggaaaa ttgaattggg caagtcagat ttacgcaggg
1261 attaaagtaa agcaattatg caaactcctt aggggaacca aagcactaac agaagtaata
1321 ccactaacag aagaagcaga actagaactg gcagagaaca gggagattct aagagaacca
1381 gtacatggag tgtattatga cccatcaaaa gacttaatag cagaaata
//
last modified: Tue May 31 10:56 2022