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LOCUS JX392376 572 bp RNA linear VRL 15-JAN-2013
DEFINITION HIV-1 isolate Yunnan_1997_yn9701 from China envelope glycoprotein
(env) gene, partial cds
ACCESSION JX392376
VERSION JX392376.1 GI:403404920
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 572)
Show all sequences for reference 1
AUTHORS Meng,Z., Xin,R., Zhong,P., Zhang,C., Abubakar,Y.F., Li,J., Liu,W.,
Zhang,X. and Xu,J.
TITLE A New Migration Map of HIV-1 CRF07_BC in China: Analysis of
Sequences from 12 Provinces over a Decade
JOURNAL PLoS ONE 7 (12), E52373 (2012)
PUBMED 23300654
REFERENCE 2 (bases 1 to 572)
Show all sequences for reference 2
AUTHORS Meng,Z., Xin,R., Zhang,X., Wang,W., Xu,J. and Li,J.
TITLE Direct Submission
JOURNAL Submitted (17-JUL-2012) Scientific Research Department, Shanghai
Public Health Clinical Center, 2901 Caolang Road, Shanghai 201508,
China
COMMENT Annotation information was provided by the author. Some of the
information does not have GenBank feature identifiers and is being
provided in the comment section. Information in this section is
searchable in HIV-1 Database at Los Alamos (hiv-1.lanl.gov).;
##HIVDataBaseData-START## Patient code Yunnan_1997_yn9701 Sample
city Dehong Culture method primary Sample tissue plasma Risk factor
IDU Patient health status asymptomatic ##HIVDataBaseData-END##
FEATURES Location/Qualifiers
source 1..572
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="Yunnan_1997_yn9701"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="China"
/collection_date="1997"
/note="subtype: CRF07_BC"
gene <1..>572
/gene="env"
CDS <1..>572
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AFR44689.1"
/db_xref="GI:403404921"
/translation="IVHLNQSVEIVCTRPGNNTRKXIRIGPGQTFYATGXIIGDIRQA
HCNISEDKWNXTLQXVSXKLAEHFQNKTIKFASSSGGDLEXTTHSFNCRGXFFYCNTS
GLFNGTYMPXPNXTKSNSSSIITIPCRIKQIINMWQEVGRAMYAPPIEGNITCKSNIT
GLLLVRDGGTEXNDTETFRPGGGDMRBNWR"
BASE COUNT 229 a 89 c 111 g 128 t 15 other
ORIGIN
1 atagtacatc ttaatcaatc tgtagaaatt gtatgtacaa gacccggcaa taatacaaga
61 aaargtataa ggataggacc aggacaaaca ttctatgcaa caggagamat aataggagac
121 ataagacaag crcattgtaa cattagtgaa gataaatgga atraaactyt acaargggta
181 agtraaaaat tagcagaaca cttccagaat aaaacaataa aatttgcatc atcctcagga
241 ggggacctag aarttacaac acatagcttt aattgtagag garaattttt ctattgtaat
301 acatcaggcc tgtttaatgg tacatacatg cctamkccta atgrtacaaa aagtaattca
361 agctcaatca tcacaatccc atgcagaata aagcaaatta taaatatgtg gcaggaggta
421 ggacgagcaa tgtatgcccc tcccattgaa ggaaacataa catgtaaatc aaatatcaca
481 ggaytactat tggtacgtga tggaggaaca gagmcaaatg atacagagac attcagacct
541 ggaggaggag atatgaggra caattggaga ag
//
last modified: Tue May 31 10:56 2022