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LOCUS JX263509 428 bp DNA linear VRL 04-APR-2013
DEFINITION HIV-1 isolate YNPE09R245 from China envelope glycoprotein (env)
gene, partial cds
ACCESSION JX263509
VERSION JX263509.1 GI:428132598
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 428)
Show all sequences for reference 1
AUTHORS Chen,M., Yang,L., Ma,Y., Su,Y., Yang,C., Luo,H., Chen,H., Chen,L.,
Yan,W., Shi,Y., Jia,M. and Lu,L.
TITLE Emerging Variability in HIV-1 Genetics among Recently Infected
Individuals in Yunnan, China
JOURNAL PLoS ONE 8 (3), E60101 (2013)
PUBMED 23555898
REFERENCE 2 (bases 1 to 428)
Show all sequences for reference 2
AUTHORS Chen,M., Yang,L., Ma,Y., Yang,C., Su,Y., Luo,H., Chen,H., Chen,L.,
Yan,W., Shi,Y., Jia,M. and Lu,L.
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2012) Center for AIDS/STD Control and Prevention,
Yunnan Center for Disease Control and Prevention, No 158, Dongsi
Street, Xishan District, Kunming, Yunnan 650022, China
COMMENT ##Assembly-Data-START## Assembly Method Sequencher v. 5.0
Sequencing Technology Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..428
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="YNPE09R245"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="China"
/collection_date="31-Mar-2009"
gene <1..>428
/gene="env"
CDS <1..>428
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AFY97482.1"
/db_xref="GI:428132599"
/translation="IIRSENITNNAKXIIVHLNTSVEINCTRPSTNTIXSIRIGPGQM
FYRTGDIIGDIRKAYCKINGTRWYKVLGQVKKKLKEYFXNKNISFEXPSGGDMEIITH
HFNCRGEFFYCNTTKLFNNNCSETEECTIPCRIKQIVNMW"
BASE COUNT 180 a 61 c 76 g 106 t 5 other
ORIGIN
1 ataatcagat ctgaaaatat cacaaacaat gccaaaamca taatagtgca ccttaataca
61 tctgtagaaa tcaattgtac caggccctcc accaatacca ttamaagtat acgtatagga
121 ccaggacaaa tgttctatag aacaggagac ataataggag atataaggaa agcatattgt
181 aaaattaatg gaacaagatg gtataaagtg ttaggacaag taaagaaaaa attaaaagag
241 tactttycta ataagaacat aagctttgaa ysaccctcag gaggagatat ggaaattata
301 acgcatcatt ttaattgtag aggggaattt ttctattgca atacaacaaa gctgtttaat
361 aataattgca gtgaaaccga ggagtgtaca attccatgca ggataaaaca aattgtaaac
421 atgtggca
//
last modified: Tue May 31 10:56 2022