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LOCUS JX263441 465 bp DNA linear VRL 04-APR-2013
DEFINITION HIV-1 isolate YNKM09R082 from China envelope glycoprotein (env)
gene, partial cds
ACCESSION JX263441
VERSION JX263441.1 GI:428132462
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 465)
Show all sequences for reference 1
AUTHORS Chen,M., Yang,L., Ma,Y., Su,Y., Yang,C., Luo,H., Chen,H., Chen,L.,
Yan,W., Shi,Y., Jia,M. and Lu,L.
TITLE Emerging Variability in HIV-1 Genetics among Recently Infected
Individuals in Yunnan, China
JOURNAL PLoS ONE 8 (3), E60101 (2013)
PUBMED 23555898
REFERENCE 2 (bases 1 to 465)
Show all sequences for reference 2
AUTHORS Chen,M., Yang,L., Ma,Y., Yang,C., Su,Y., Luo,H., Chen,H., Chen,L.,
Yan,W., Shi,Y., Jia,M. and Lu,L.
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2012) Center for AIDS/STD Control and Prevention,
Yunnan Center for Disease Control and Prevention, No 158, Dongsi
Street, Xishan District, Kunming, Yunnan 650022, China
COMMENT ##Assembly-Data-START## Assembly Method Sequencher v. 5.0
Sequencing Technology Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..465
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="YNKM09R082"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="China"
/collection_date="31-Mar-2009"
gene <1..>465
/gene="env"
CDS <1..>465
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AFY97414.1"
/db_xref="GI:428132463"
/translation="DIIIRSENLTNNVKTIIVQLNQSVEIVCTRPGNNTRKSIRIGPG
QTXYATGDITGDIRQAHCNISEQKWNETLQRVGEKLAXHFNKTIKFEPSSGGDLEITT
HSFNCRGEFFYCNTTGLFGRTYWPTYTPNGTESNSTITIPCRIKQIINMWQEV"
BASE COUNT 201 a 73 c 82 g 107 t 2 other
ORIGIN
1 gatataataa ttagatctga aaatctgaca aacaatgtca aaacaataat agtacagctt
61 aatcaatctg tagaaattgt atgtacaaga ccaggcaata atacaagaaa aagtataagg
121 ataggaccag gacaaacatt wtacgcaaca ggagacataa caggagacat aagacaagca
181 cattgtaaca ttagtgaaca gaaatggaat gaaactttac aaagagtagg tgaaaaatta
241 gcakaacact ttaataaaac aataaaattt gaaccctctt caggagggga cctagaaatt
301 acaacacata gctttaattg tagaggagaa tttttctatt gtaatacaac aggcctgttt
361 ggtaggacat actggcctac atacacacct aatggtacag aaagtaattc aaccatcaca
421 atcccatgca gaataaagca aattataaat atgtggcagg aggta
//
last modified: Tue May 31 10:56 2022