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LOCUS	    JQ609704		    2553 bp    DNA     linear	VRL 25-MAR-2012
DEFINITION  HIV-1 isolate 45_01dH5 from USA envelope glycoprotein (env) gene,
	    complete cds
ACCESSION   JQ609704
VERSION     JQ609704.1 GI:380718144
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2553)
            Show all sequences for reference 1
  AUTHORS   Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B.F., Yang,Z., Imamichi,H.,
	    Doria-Rose,N., Hoxie,J.A., Connors,M., Shaw,G.M., Wyatt,R.T. and
	    Mascola,J.R.
  TITLE     Selection Pressure on HIV-1 Envelope by Broadly Neutralizing
	    Antibodies to the Conserved CD4-Binding Site.
  JOURNAL   J. Virol.. 86(10); 5844-56 (2012)
  PUBMED    22419808
REFERENCE   2 (bases 1 to 2553)
            Show all sequences for reference 2
  AUTHORS   Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B., Yang,Z., Imamichi,H.,
	    Doria-Rose,N., Hoxie,J., Connors,M., Shaw,G., Wyatt,R. and
	    Mascola,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2012) VRC / NIAID, NIH, 40 Convent Drive,
	    Bethesda, MD 20910, USA
FEATURES             Location/Qualifiers
     source	     1..2553
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="45_01dH5"
		     /isolation_source="PBMC"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="30-Jul-2001"
		     /note="subtype: B"
     gene	     1..2553
		     /gene="env"
     CDS	     1..2553
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFE02270.1"
		     /db_xref="GI:380718145"
		     /translation="MRVTGIKKNCQHLWRGGTLFLGILMICSAAENLWVTVYYGVPVW
		     KEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTEKFNMWKNNMVEQ
		     MHEDIISLWDQSLKPCVKLTPLCVTLNCTDLRNATNTTSSSGGAMEGGEIKNCSFNIT
		     TSMRDKVQKEYALFYKLDVVPIDNDNTSTSYRLISCNTSVITQACPKVSFEPIPIHYC
		     APAGFAILKCNDKKFKGTGSCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSDN
		     FKDNAKIIIVQLNETVEINCTRPNNNTRKSIHIGPGRAFYTTGEIIGDIRQAHCNISK
		     AKWDNTLKQIARKLKEQFENKTIAFNQSSGGDPEIVMHSFNCGGEFFYCNSTQLFNST
		     WNGTERLNNTGENITITLPCRIRQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTR
		     DGGNSTNGTETFRPGGGDMRDNWRSELYKYKVVKIEPLGLAPTKAKRRVVQREKRAVG
		     IGAVFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWG
		     IKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEKIWNNMTWME
		     WEREIHNYTSLIYNLIEESQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMI
		     VGGLVGLRIIFTVFSIVNRVRQGYSPLSFQTHLPAPRGPDRPEGIGEEGGEQDRDRSD
		     RLVTGFLALFWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEILKYWWNLLQYWS
		     QELKNSAVSLLNATAIAVAEGTDRVIEVLQRAFRAVLNIPTRIRQGLERALL"
BASE COUNT	889 a	 436 c	  612 g    616 t
ORIGIN
       1 atgagagtga cggggatcaa gaagaattgt cagcacttgt ggagaggggg caccttgttc 
      61 ctggggatat tgatgatctg tagtgctgca gaaaatttgt gggtcacagt ctattatggg 
     121 gtacctgtgt ggaaagaagc aaccaccact ctattttgtg catcagatgc taaagcatat 
     181 gatacagagg tacataatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca 
     241 caagaagtag tattgggaaa tgtgacagaa aaatttaaca tgtggaaaaa taacatggta 
     301 gaacagatgc atgaggatat aatcagttta tgggatcaaa gcctaaagcc atgtgtaaaa 
     361 ttaaccccac tctgtgttac tttaaattgc actgatttga ggaatgctac taataccact 
     421 agtagtagcg ggggagcgat ggagggagga gaaataaaaa actgctcttt taatatcacc 
     481 acaagcatga gagataaggt gcagaaagaa tatgcattat tttataagct tgatgtagta 
     541 ccaatagata atgataatac tagtaccagc tataggttga taagttgcaa cacctcagtc 
     601 attacacagg cctgtccaaa ggtatccttt gagccaattc ccatacatta ttgtgccccg 
     661 gctggttttg cgattctaaa gtgtaacgat aaaaagttca agggaacagg atcatgtaaa 
     721 aatgtcagca cagtacaatg tacacatgga attaggccag tagtatcaac tcaactgctg 
     781 ttaaatggca gtctagcaga agaagaggta gtaataagat ctgacaattt caaggacaat 
     841 gctaaaatca taatagtaca gctgaatgaa actgtagaaa ttaattgtac aagacccaac 
     901 aacaatacaa gaaaaagtat acatatagga ccagggagag cattttatac aacaggagaa 
     961 ataataggag atataagaca agcacattgt aacattagta aagcaaaatg ggataacact 
    1021 ttaaaacaga tagcaagaaa attaaaagaa caatttgaga ataaaacaat agcctttaac 
    1081 caatcctcag gaggggaccc agaaattgta atgcacagtt ttaattgtgg aggggaattt 
    1141 ttctactgta attcaacaca actgtttaat agtacttgga atggtactga aaggttaaat 
    1201 aacactggag aaaatatcac aatcacactc ccatgcagaa taagacaaat cataaacatg 
    1261 tggcaggaag taggaaaagc aatgtatgcc cctcccatca gaggacaaat tagatgttca 
    1321 tcaaatatta cagggctgct attaacaaga gatggtggta atagcacgaa cgggactgag 
    1381 accttcagac ctggaggagg agatatgagg gacaattgga gaagtgaatt atataaatat 
    1441 aaagtagtaa aaattgaacc attaggatta gcacccacca aggcaaagag aagagtggtg 
    1501 cagagagaaa aaagagcagt gggaatagga gctgtgttcc ttgggttctt gggagcagca 
    1561 ggaagcacta tgggcgcagc gtcaatgacg ctgacggtac aggccagact attattgtct 
    1621 ggtatagtgc aacagcagaa caatttgctg agagctattg aggcgcaaca gcatctgttg 
    1681 caactcacag tctggggcat caagcagctc caggcaagag tcctggctgt ggaaagatac 
    1741 ctaaaggatc aacagctcct ggggatttgg ggttgctctg gaaaactcat ttgcaccact 
    1801 gctgtgcctt ggaatgctag ttggagtaat aaatctctgg aaaaaatttg gaataacatg 
    1861 acctggatgg agtgggaaag agaaattcac aattacacaa gcttaatata caacctaatt 
    1921 gaagaatcgc agaaccaaca agaaaagaat gaacaagaat tattggaatt agataaatgg 
    1981 gcaagtttgt ggaattggtt tgacataaca aaatggctgt ggtacataaa aatattcata 
    2041 atgatagtag gaggcttggt aggtttaaga ataattttta ctgtattttc tatagtgaat 
    2101 agagttaggc agggatactc accattatcg tttcagaccc acctcccagc cccgagggga 
    2161 cccgacaggc ccgaaggaat cggagaagaa ggtggagagc aagacagaga cagatccgat 
    2221 cgcttagtga ctggattctt agcacttttc tgggtcgacc tgcggagcct gtgcctcttc 
    2281 agctaccacc gcttgagaga cttactcttg attgtaacga ggattgtgga acttctggga 
    2341 cgcagggggt gggaaatcct caaatattgg tggaatctcc tgcagtattg gagtcaggaa 
    2401 ctaaagaata gtgctgttag cttgctcaat gccacagcca tagcagtagc tgaagggaca 
    2461 gatagggtta tagaagtatt acaaagagct tttagagctg ttctcaacat acctaccaga 
    2521 ataagacagg gcttggaaag ggctttgcta taa
//
last modified: Tue May 31 10:56 2022


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