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LOCUS JQ609693 2622 bp DNA linear VRL 25-MAR-2012
DEFINITION HIV-1 isolate 45_01dG13 from USA envelope glycoprotein (env) gene,
complete cds
ACCESSION JQ609693
VERSION JQ609693.1 GI:380718122
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2622)
Show all sequences for reference 1
AUTHORS Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B.F., Yang,Z., Imamichi,H.,
Doria-Rose,N., Hoxie,J.A., Connors,M., Shaw,G.M., Wyatt,R.T. and
Mascola,J.R.
TITLE Selection Pressure on HIV-1 Envelope by Broadly Neutralizing
Antibodies to the Conserved CD4-Binding Site.
JOURNAL J. Virol.. 86(10); 5844-56 (2012)
PUBMED 22419808
REFERENCE 2 (bases 1 to 2622)
Show all sequences for reference 2
AUTHORS Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B., Yang,Z., Imamichi,H.,
Doria-Rose,N., Hoxie,J., Connors,M., Shaw,G., Wyatt,R. and
Mascola,J.
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2012) VRC / NIAID, NIH, 40 Convent Drive,
Bethesda, MD 20910, USA
FEATURES Location/Qualifiers
source 1..2622
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="45_01dG13"
/isolation_source="PBMC"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="USA"
/collection_date="30-Jul-2001"
/note="subtype: B"
gene 1..2622
/gene="env"
CDS 1..2622
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AFE02259.1"
/db_xref="GI:380718123"
/translation="MRVMGIRKNCQRLWKGGIWFLGILMICSATEKLWVTVYYGVPVW
KEANTTLFCASDAKSYKTEKHNVWATHACVPTDPNPQEVVLKNVTEKFNMWENNMVEQ
MHEDIISLWDQSLKPCVKLTPLCVTLNCTDYEGNIKNTTNTTATNSTSGGPTTPTPTS
SGGAREEREIKNCTFNVTTGMRDKVQKEYALLYKFDIEPIKDDSDKTTTTNTNYRLIS
CNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGKCTNVSTVQCTHGIRP
VVSTQLLLNGSLAEEEIIIRSENLTENHKTIIVQLNKTVLINCTRPNNNTRRSIHMGP
GKAFFATGAIIGNIRQAHCNISETDWNNTLRQVAIKLRKLFNKTIVFNHSTGGDPEIV
MHSFNCGGEFFYCNTTQLFNSTWHGNESEWTKDNKTITLPCRIKQIVNRWQEVGKAMY
APPIEGLIRCSSNITGLLLTRDGGNITNKNTTETFRPEGGNMKDNWRSELYKYKVVKI
EPLGVAPTKAKRRVVQREKRAAGIGALFLGFLGAAGSTMGAASLTLTVQARLLLSGIV
QQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTT
VPWNGSWSNKTYEAIWDNMTWMDWEREIENYTGVIYDLIEQSQNQQEKNEQELLALDK
WASLWNWFDITKWLWYIKIFIMIVGGLIGLRIIFTVLSIVNRVRQGYSPLSFQTHLPA
PRGPDRPEGIEEEGGEQGRDRSGRLATGFLAIVWVDLRSLCLFSYHRLRDLLLIVTRI
VELLGRRGWEILKYWWNLLQYWSQELKNSAVSLFNATAIVVAEGTDRVIEILQRAFRA
ILNIPTRIRQGLERALL"
BASE COUNT 922 a 448 c 616 g 636 t
ORIGIN
1 atgagagtga tggggatcag gaagaattgt cagcgcttgt ggaaaggggg catctggttc
61 ctagggatat tgatgatctg tagtgctaca gaaaaattgt gggtcacagt ctattatggg
121 gtacctgtgt ggaaagaagc aaacaccact ctattttgtg catcagatgc taaatcatat
181 aagacagaga aacataatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca
241 caagaagtag tattgaaaaa tgtgacagaa aagtttaaca tgtgggaaaa taacatggta
301 gaacagatgc atgaggatat aatcagttta tgggatcaaa gcctaaagcc atgtgtaaaa
361 ttaacccccc tctgtgttac tttaaattgc actgattatg aggggaatat taagaatacc
421 actaatacta ctgctaccaa tagtaccagt ggtggtccca ctacgcctac gcccactagt
481 agcgggggag cgagggaaga aagagaaata aaaaactgca cttttaatgt caccacaggc
541 atgagagata aggtacagaa agaatatgca ttattgtata agtttgatat agaaccaata
601 aaggatgata gtgataagac tactactact aataccaact ataggttgat aagttgtaac
661 acctcagtca ttacacaggc ctgtccaaag gtatcctttg agccaattcc catacattat
721 tgtgccccgg ctggttttgc gattctaaag tgtaatgata aaaagttcaa tggaacagga
781 aaatgtacaa atgtcagcac agtacaatgc acacatggaa ttaggccagt agtatcaact
841 caactgctgt taaatggcag tctagcagaa gaagagataa taataagatc tgaaaatctc
901 acggaaaatc ataaaaccat aatagtacag ctgaataaaa ctgtactaat taattgtaca
961 agacccaaca acaatacaag aaggagtata catatggggc cagggaaagc attttttgca
1021 acaggagcaa taataggaaa tataagacaa gcacattgta acattagtga aacagattgg
1081 aataacactt taagacaggt agcaataaaa ttaagaaaac tctttaataa aacaatagtc
1141 tttaaccact ccacaggagg ggacccagag attgtaatgc acagttttaa ttgtggaggg
1201 gaatttttct actgtaatac aacacaactg tttaatagca cttggcatgg gaatgagagt
1261 gaatggacta aagataataa aacaattaca ctcccatgca gaataaaaca aattgtaaac
1321 cggtggcagg aagtaggaaa agcaatgtat gcccctccca tcgaaggact aattagatgt
1381 tcatcaaata ttactgggct gctattaaca agagatggtg gtaatatcac gaacaagaat
1441 actactgaga ccttcagacc tgaaggagga aatatgaagg ataattggag aagtgaatta
1501 tataaatata aagtagtaaa aattgaacca ttaggagtag cacccaccaa ggcaaaaaga
1561 agagtggtgc agagagaaaa aagagcagcg ggaataggag ctttgttcct tgggttcttg
1621 ggagcagcag gaagcactat gggcgcagcg tcactgacgc tgacggtaca ggccagacta
1681 ttattgtctg gtatagtgca acagcagaat aatttgctga gagctattga ggcgcaacaa
1741 catctgttgc aactcacagt ctggggcatc aagcagctcc aggcaagagt cctggctgtg
1801 gaaagatacc taagggatca acagctcctg gggatttggg gttgctctgg aaaactcatt
1861 tgcaccacta ctgtgccttg gaatgggagt tggagtaata aaacttatga ggcaatttgg
1921 gataacatga cctggatgga ttgggaaaga gaaattgaaa attacacagg cgtaatatat
1981 gacttaattg aacaatcgca aaaccagcaa gaaaagaatg aacaagaatt attggcatta
2041 gataaatggg caagtttgtg gaattggttt gacataacaa aatggctgtg gtacataaaa
2101 atattcataa tgatagtagg aggcttaata ggtttaagaa taatttttac tgtactttct
2161 atagtgaata gagttaggca gggatactca ccattatcgt ttcagaccca cctcccagcc
2221 ccgaggggac ccgacaggcc cgaaggaatc gaagaagaag gtggagagca aggcagagac
2281 agatccggtc gtttagcaac tggattctta gcaattgtct gggtcgacct gcggagcctg
2341 tgcctcttca gctaccaccg cttgagagac ttactcttga ttgtgacgag gattgtggaa
2401 cttctgggac gcagggggtg ggaaatcctc aaatattggt ggaatctcct gcagtattgg
2461 agtcaggaac taaagaatag tgctgttagc ttgtttaatg ccacagccat agtagtagct
2521 gaagggacag atagggttat agaaatatta caaagagctt ttagagctat tctcaacata
2581 cctactagaa taagacaggg cttagaaagg gctttgctat aa
//
last modified: Tue May 31 10:56 2022