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LOCUS	    JQ438062		     520 bp    DNA     linear	VRL 04-JUN-2012
DEFINITION  HIV-1 isolate LCPIS00072 from Senegal envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   JQ438062
VERSION     JQ438062.1 GI:388816988
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 520)
            Show all sequences for reference 1
  AUTHORS   Jennes,W., Kyongo,J.K., Vanhommerig,E., Camara,M., Coppens,S.,
	    Seydi,M., Mboup,S., Heyndrickx,L. and Kestens,L.
  TITLE     Molecular Epidemiology of HIV-1 Transmission in a Cohort of HIV-1
	    Concordant Heterosexual Couples from Dakar, Senegal
  JOURNAL   PLoS ONE 7 (5), E37402 (2012)
  PUBMED    22615999
REFERENCE   2 (bases 1 to 520)
            Show all sequences for reference 2
  AUTHORS   Jennes,W., Kyongo,J.K., Vanhommerig,E., Camara,M., Coppens,S.,
	    Seydi,M., Mboup,S., Heyndrickx,L. and Kestens,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2012) Department of Biomedical Sciences,
	    Institute of Tropical Medicine, Nationalestraat 155, Antwerp,
	    Antwerp 2000, Belgium
FEATURES             Location/Qualifiers
     source	     1..520
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="LCPIS00072"
		     /isolation_source="peripheral blood mononuclear cells"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Senegal: Dakar"
		     /collection_date="26-Jul-2005"
     gene	     <1..>520
		     /gene="env"
     CDS	     <1..>520
		     /gene="env"
		     /note="gp41"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFK78934.1"
		     /db_xref="GI:388816989"
		     /translation="QLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLALERY
		     LRDQQLLGIWGCSGKLICTTTVPWNSSWSNKXYTDIWEXMTWLQWDKEISNYTBIIYX
		     LIEESQNQQEKNEQBLLALDKWASLWSWFDITKWLWYIXIFIMIVGGLIGLRIVFAVL
		     SIINRVRQGYSP"
BASE COUNT	174 a	  84 c	  119 g    136 t      7 other
ORIGIN
       1 ggcaattatt gtccggtata gtgcaacagc agagcaayct gctgagggct atagaggctc 
      61 aacagcatct gttgaaactc acggtctggg gcattaaaca gctccaggca agagtcctgg 
     121 ctctggaaag atacctaagg gatcaacagc tcctaggaat ttggggctgc tctggaaaac 
     181 tcatctgcac cactactgtg ccctggaact ctagttggag taataaaamt tatactgaca 
     241 tatgggaama catgacctgg ctacaatggg ataaagaaat tagcaattac acaracataa 
     301 tatatamttt aattgaagaa tcgcagaacc agcaggaaaa gaatgaacaa ratttattag 
     361 cattggacaa gtgggcaagt ctgtggagtt ggtttgacat aacaaaatgg ctatggtata 
     421 taaraatatt tataatgata gtaggaggtt taataggttt aagaatagtt tttgcagtgc 
     481 tttctataat aaatagagtt aggcagggat actcaccttt 
//
last modified: Tue May 31 10:56 2022


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