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LOCUS	    JQ438060		     520 bp    DNA     linear	VRL 04-JUN-2012
DEFINITION  HIV-1 isolate LCPIS00070 from Senegal envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   JQ438060
VERSION     JQ438060.1 GI:388816984
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 520)
            Show all sequences for reference 1
  AUTHORS   Jennes,W., Kyongo,J.K., Vanhommerig,E., Camara,M., Coppens,S.,
	    Seydi,M., Mboup,S., Heyndrickx,L. and Kestens,L.
  TITLE     Molecular Epidemiology of HIV-1 Transmission in a Cohort of HIV-1
	    Concordant Heterosexual Couples from Dakar, Senegal
  JOURNAL   PLoS ONE 7 (5), E37402 (2012)
  PUBMED    22615999
REFERENCE   2 (bases 1 to 520)
            Show all sequences for reference 2
  AUTHORS   Jennes,W., Kyongo,J.K., Vanhommerig,E., Camara,M., Coppens,S.,
	    Seydi,M., Mboup,S., Heyndrickx,L. and Kestens,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2012) Department of Biomedical Sciences,
	    Institute of Tropical Medicine, Nationalestraat 155, Antwerp,
	    Antwerp 2000, Belgium
FEATURES             Location/Qualifiers
     source	     1..520
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="LCPIS00070"
		     /isolation_source="peripheral blood mononuclear cells"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Senegal: Dakar"
		     /collection_date="26-Jul-2005"
     gene	     <1..>520
		     /gene="env"
     CDS	     <1..>520
		     /gene="env"
		     /note="gp41"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFK78932.1"
		     /db_xref="GI:388816985"
		     /translation="QLLSGIVQQQSNLXXAIEAQQHMLRLTVWGIKQLQARVLAVERY
		     LRDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQNEIWDNMTWLQWDKEISNYTKIIYG
		     LIEESQNQQEKNEQDLLALDKWASLWTWFDISKWLWYIKIFIMIVGGLIGLRIVXAVI
		     SIINRVRQGYSP"
BASE COUNT	175 a	  77 c	  123 g    136 t      9 other
ORIGIN
       1 gacaattatt gtctggtata gtgcaacagc agagcaatyt gckrrgggct atagaggctc 
      61 aacagcatat gttgagactc acagtctggg gcattaaaca actccaggcr agagtcctag 
     121 ctgtggaaag gtacctaagg gatcaacagc tcctaggaat ttggggttgc tctggaaarc 
     181 tcatctgcac cactaatgtg ccctggaact ctagttggag taataaatct caaaatgaaa 
     241 tatgggataa tatgacctgg ctgcaatggg ataaagagat cagyaattac acaaaaataa 
     301 tatatggtct aattgaggaa tcgcagaacc agcaggaraa gaatgaacaa gacttattgg 
     361 cattggacaa gtgggcaagt ctgtggactt ggtttgatat atcaaaatgg ttatggtata 
     421 taaaaatatt tataatgata gtagggggct taataggatt aagaatagtt kttgctgtaa 
     481 tatctataat aaatagagtt aggcagggat actcaccttt 
//
last modified: Tue May 31 10:56 2022


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