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LOCUS	    JQ362422		    2580 bp    DNA     linear	VRL 24-APR-2012
DEFINITION  Human immunodeficiency virus clone 620345.c1 envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   JQ362422
VERSION     JQ362422.1 GI:384563942
KEYWORDS    .
SOURCE	    Human immunodeficiency virus
  ORGANISM  Human immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group; unclassified Primate lentivirus group
REFERENCE   1 (bases 1 to 2580)
            Show all sequences for reference 1
  AUTHORS   Wu,X., Yang,Z.Y., Li,Y., Hogerkorp,C.M., Schief,W.R., Seaman,M.S.,
	    Zhou,T., Schmidt,S.D., Wu,L., Xu,L., Longo,N.S., McKee,K.,
	    O'Dell,S., Louder,M.K., Wycuff,D.L., Feng,Y., Nason,M.,
	    Doria-Rose,N., Connors,M., Kwong,P.D., Roederer,M., Wyatt,R.T.,
	    Nabel,G.J. and Mascola,J.R.
  TITLE     Rational design of envelope identifies broadly neutralizing human
	    monoclonal antibodies to HIV-1
  JOURNAL   Science 329 (5993), 856-861 (2010)
  PUBMED    20616233
REFERENCE   2 (bases 1 to 2580)
            Show all sequences for reference 2
  AUTHORS   Mascola,J. and Wu,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JAN-2012) VRC/NIAID, NIH, 40 Convent Drive, Bethesda,
	    MD 20910, USA
FEATURES             Location/Qualifiers
     source	     1..2580
		     /organism="Human immunodeficiency virus"
		     /proviral="Human immunodeficiency virus"
		     /mol_type="genomic DNA"
		     /isolate="620345"
		     /isolation_source="infected PBMCs obtained from the U.S.
		     Military HIV Research Program"
		     /host="Homo sapiens"
		     /db_xref="taxon:12721"
		     /clone="620345.c1"
		     /country="Thailand"
		     /note="subtype: CRF01_AE"
     gene	     1..>2580
		     /gene="env"
     CDS	     1..>2580
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFI08642.1"
		     /db_xref="GI:384563943"
		     /translation="MKVKETQMNWLNLWRWGTLILGLVMICSASDKLWVTVYYGVPVW
		     RDADTTLFCASDAKVHSTEVHNVWATHACVPTDPNPQEIHLENVTENFNMWQNKMAEQ
		     MQEDVISLWDQSLKPCIKLTPLCVTLSCTEAKFNETFNKIDNITKVSNLTDEMRNCSF
		     NMTTELRDKKQQVYALFYKLDIVPIDNSSEYRLINCNTSVIKQACPKVSFDPIPIHYC
		     TPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTHLLLNGSLAEEEIVIRSED
		     ITKNTKTIIVHLNKSVEINCTRPSNNTRTSVRIGPGQVFYRTGEVITSIRKAYCEING
		     TKWNETLRQVAKKLKEHFKNKTIIFQPPSGGDLEVTTHHFNCRGEFFYCDTAQLFNST
		     WRGNETKEERNGTSNDIIILPCRIKQIVRMWQGVGQSMYAPPISGIINCVSNITGILL
		     TSDGDGGPTADNETFRPAGGDMRDNWRSELYKYKVVQIEPLGIAPTRAKRRVVDREKR
		     AVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEVQQHLLQLT
		     VWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSYEDIWYNMT
		     WIEWEREISNYTSQIYEILTESQNQQDRNEKDLLELDKWASLWNWFDITNWLWYIKIF
		     IMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSLQIPTRHQREPDRPEGIEEGGGEQGRD
		     RSVRLVSGFLALAWDDLRSLCLFSYHRLRDFILIVARTVELLGRSSLKGLRRGWEGLK
		     YLGNLLLYWSQELKISAISLLDATAIAVAGWTDRIIEVAQRAWRAFLHIPRRIRQGLE
		     RALL"
BASE COUNT	894 a	 426 c	  606 g    654 t
ORIGIN
       1 atgaaagtga aggagacaca gatgaattgg ctaaacttgt ggagatgggg aactttgatc 
      61 cttgggttgg tgatgatttg tagtgcctca gacaaattgt gggttacagt ttattatggg 
     121 gttcctgtgt ggagagatgc agataccacc ttattttgtg catcagatgc caaagtacat 
     181 tcaacagaag tgcacaatgt ctgggccaca catgcctgtg tacccacaga ccccaaccca 
     241 caagaaatac acctggaaaa tgtaacagaa aattttaaca tgtggcaaaa taaaatggca 
     301 gagcagatgc aggaggatgt aatcagttta tgggatcaaa gtctaaagcc atgtataaag 
     361 ttaactcctc tctgtgttac tttaagttgt actgaggcta aattcaatga gacttttaac 
     421 aaaattgata acataactaa ggtctctaac ttgacagatg aaatgagaaa ctgttctttt 
     481 aatatgacca cagaactaag agataagaag cagcaggtct atgcactttt ttataagctt 
     541 gacatagtac caattgataa tagtagtgag tataggttaa taaattgtaa tacttcagtc 
     601 attaagcagg cttgtccaaa ggtatccttt gatccaattc ctatacatta ttgtactcca 
     661 gctggttatg cgattttaaa gtgtaatgat aaaaatttca atgggacagg gccatgtaaa 
     721 aatgtcagtt cagtacaatg cacacatgga attaagccag tggtatcaac tcacttactg 
     781 ttaaatggca gtttagcaga agaagagata gtaatcagat ctgaagatat cacaaaaaat 
     841 accaaaacca taatagtgca ccttaataaa tctgtagaaa tcaattgtac tagaccctcc 
     901 aacaatacaa gaacaagtgt aaggatagga ccaggacaag tgttctatag aacaggagaa 
     961 gtaataacaa gtataagaaa agcatattgt gagattaatg gaacaaaatg gaatgaaact 
    1021 ttaagacagg tagctaaaaa attaaaagag cactttaaaa ataaaacaat aatctttcaa 
    1081 ccaccctcag gaggagatct agaagttaca acacatcatt ttaattgtag aggggaattt 
    1141 ttctattgtg atacagcaca actgtttaat agtacttgga gaggaaatga aaccaaggag 
    1201 gaaagaaatg gcactagtaa tgacattatc atacttccat gcaggataaa gcaaattgta 
    1261 agaatgtggc agggagtagg acaatcaatg tatgctcctc ccatcagtgg aataattaat 
    1321 tgtgtatcaa atattacagg aatactattg acaagtgatg gtgatggtgg tcctactgca 
    1381 gataacgaga ccttcagacc tgcaggagga gatatgaggg acaattggag aagtgaatta 
    1441 tataaatata aagtagtaca aattgaacca ctaggaatag cacccaccag ggcaaagaga 
    1501 agagtggtgg acagagaaaa aagagcagtg ggaataggag ctatgatctt tgggttcttg 
    1561 ggagcagcag gaagcactat gggcgcagcg tcaataacgc tgacggtaca ggccagacaa 
    1621 ttattgtctg gtatagtgca acagcaaagc aatttgctga gagctataga ggtgcaacag 
    1681 catctgttgc aactcacagt ctggggcatt aaacagctcc aggcaagagt cctggctgtg 
    1741 gaaagatacc taaaggatca aaagttccta ggactttggg gctgctctgg aaaaatcatc 
    1801 tgcaccactg ctgtgccctg gaactccact tggagtaata aatcttatga agatatttgg 
    1861 tacaatatga catggataga atgggaaaga gaaattagca attacacaag ccaaatatat 
    1921 gagatactta cagaatcgca gaaccagcag gacaggaatg aaaaggattt attagaattg 
    1981 gataaatggg caagtctgtg gaattggttt gacataacaa attggctgtg gtatataaaa 
    2041 atatttataa tgatagtagg aggtttaata ggtttaagaa taatttttgc tgtgctttct 
    2101 atagtaaata gagttaggca gggatactca cctttgtctc tccagatccc tacccgtcat 
    2161 cagagggaac ccgacagacc cgaaggaatc gaagaaggag gtggcgagca aggcagagac 
    2221 agatccgtgc gattagtgag cggattctta gcacttgcct gggacgatct acggagcctg 
    2281 tgcctcttca gctaccaccg cttgagagac ttcatattga ttgtagcgag gactgtggaa 
    2341 cttctgggac gcagcagtct caagggactg agacgggggt gggaaggcct caaatatctg 
    2401 gggaatcttc tgttatattg gagccaggaa ctaaaaatta gtgctatttc tttgcttgat 
    2461 gctacagcaa tagcagtagc ggggtggaca gataggatta tagaagtagc acaaagagct 
    2521 tggagggcct ttctccacat acctagaaga atcagacagg gcttagaaag ggctttgcta 
//
last modified: Tue May 31 10:56 2022


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