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LOCUS JN662671 696 bp RNA linear VRL 29-JAN-2012
DEFINITION Simian immunodeficiency virus isolate V038_Apr03_8 vif protein
(vif) gene, complete cds
ACCESSION JN662671
VERSION JN662671.1 GI:373839172
KEYWORDS .
SOURCE Simian immunodeficiency virus (SIV)
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 696)
Show all sequences for reference 1
AUTHORS Compton,A.A., Hirsch,V.M. and Emerman,M.
TITLE The host restriction factor APOBEC3G and retroviral Vif protein
coevolve due to ongoing genetic conflict.
JOURNAL Cell. Host. Microbe.. 11(1); 91-8 (2012)
PUBMED 22264516
REFERENCE 2 (bases 1 to 696)
Show all sequences for reference 2
AUTHORS Compton,A., Hirsch,V.M. and Emerman,M.
TITLE Direct Submission
JOURNAL Submitted (09-SEP-2011) Human Biology, Fred Hutchinson Cancer
Research Center, 1100 Fairview Ave N. C2-023, Seattle, WA 98102,
USA
FEATURES Location/Qualifiers
source 1..696
/organism="Simian immunodeficiency virus"
/mol_type="genomic RNA"
/strain="SIVagm.Ver90"
/isolate="V038_Apr03_8"
/isolation_source="plasma"
/db_xref="taxon:11723"
/lab_host="Chlorocebus aethiops sabaeus"
gene 1..696
/gene="vif"
CDS 1..696
/gene="vif"
/codon_start="1"
/transl_table="1"
/product="vif protein"
/protein_id="AEY76078.1"
/db_xref="GI:373839173"
/translation="MNQEKEWVMRVTWKVSGDLITKWQGIVRYWMTKRNLKWQYMMHY
QINWAWYTMCRYIIPIGLEGEIQIDCYWHLTPERGWLSTYAIGIQYLGAVGNFRTELD
PTTADGMIHLHYFSCFTERAIQKAIRGERFVFCQFPEGHKTTGKVPSLQYLALLAHQN
GIRERSQRKQARRSRDLGSKQRTMGRMAKGHVRRPQSGSQSTFWQRAPLPSMELLSGG
RRETGSPNDGESL"
BASE COUNT 247 a 127 c 177 g 145 t
ORIGIN
1 atgaaccaag aaaaagaatg ggtgatgagg gtaacatgga aggtctcagg ggacctgata
61 accaaatggc aaggaatagt cagatattgg atgactaaaa ggaaccttaa atggcaatac
121 atgatgcact accaaattaa ttgggcttgg tatactatgt gcagatacat tatcccaata
181 ggattagaag gagaaataca gatagactgc tattggcatc taacaccaga aagaggttgg
241 ctctccactt atgcaatagg aatacaatac ttaggagcag taggaaattt cagaacagaa
301 ttagacccaa caacagcaga tggaatgata cacctacact atttttcatg ttttacagag
361 agggccattc aaaaagctat aaggggagag agattcgtct tctgtcaatt ccccgaggga
421 cataaaacca caggaaaggt accctcactg cagtacttag cccttctggc ccatcagaat
481 ggcatcaggg agagatccca gagaaagcag gccaggagaa gtagagattt gggatctaag
541 cagagaacca tgggacgaat ggctaaggga catgttagaa gacctcaatc aggaagccaa
601 agtacatttt ggcagagagc tcctcttcca agtatggaat tattgtcagg aggaaggaga
661 gagacgggga gccccaatga tggagagagc ctatag
//
last modified: Tue May 31 10:56 2022