View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS JN662652 696 bp RNA linear VRL 29-JAN-2012
DEFINITION Simian immunodeficiency virus isolate U964_Jun02_212 vif protein
(vif) gene, complete cds
ACCESSION JN662652
VERSION JN662652.1 GI:373839135
KEYWORDS .
SOURCE Simian immunodeficiency virus (SIV)
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 696)
Show all sequences for reference 1
AUTHORS Compton,A.A., Hirsch,V.M. and Emerman,M.
TITLE The host restriction factor APOBEC3G and retroviral Vif protein
coevolve due to ongoing genetic conflict.
JOURNAL Cell. Host. Microbe.. 11(1); 91-8 (2012)
PUBMED 22264516
REFERENCE 2 (bases 1 to 696)
Show all sequences for reference 2
AUTHORS Compton,A., Hirsch,V.M. and Emerman,M.
TITLE Direct Submission
JOURNAL Submitted (09-SEP-2011) Human Biology, Fred Hutchinson Cancer
Research Center, 1100 Fairview Ave N. C2-023, Seattle, WA 98102,
USA
FEATURES Location/Qualifiers
source 1..696
/organism="Simian immunodeficiency virus"
/mol_type="genomic RNA"
/strain="SIVagm.Ver90"
/isolate="U964_Jun02_212"
/isolation_source="plasma"
/db_xref="taxon:11723"
/lab_host="Chlorocebus aethiops sabaeus"
gene 1..696
/gene="vif"
CDS 1..696
/gene="vif"
/codon_start="1"
/transl_table="1"
/product="vif protein"
/protein_id="AEY76060.1"
/db_xref="GI:373839136"
/translation="MNQEKEWVMRVTWKVSGDLITKWQGIVRYWMTKRNLKWQYMMHY
QINWAWYTMCRYIIPIGLEGEIQVDCYWHLTPERGWLSTYAIGIQYLGTVGNFRTELD
PATADGMIHLHYFSCFTERAIQKAIRGERFVFCHFPEGHKTTGKVPSLQYLALLAHQN
GIRERSQRKQARRSRDLGSKQRTMGRMAKGHARRPQSGSQITFWQRAPLPSMELLSGG
RRETGNSNDRESL"
BASE COUNT 244 a 130 c 178 g 144 t
ORIGIN
1 atgaaccaag aaaaagaatg ggtgatgagg gtaacatgga aggtctcagg ggacctgata
61 accaaatggc aaggaatagt caggtattgg atgactaaaa ggaaccttaa atggcaatac
121 atgatgcact accaaattaa ttgggcttgg tatactatgt gcagatacat catcccaata
181 ggactagaag gagaaataca ggtggactgc tattggcatt taacaccaga aagaggttgg
241 ctctccactt atgcaatagg aatacaatac ttgggaacag taggaaattt cagaacagaa
301 ttagacccag caacagcaga tggaatgata cacctacact atttttcatg ttttacagag
361 agggccattc aaaaagctat aaggggagag agattcgtct tctgtcactt ccccgaggga
421 cataaaacca caggaaaggt accctcactg cagtacttag cccttctggc ccatcagaat
481 ggcatcaggg agagatccca gagaaagcag gccaggagaa gtagagattt gggatctaag
541 cagagaacca tgggacgaat ggctaaggga catgctagaa gacctcaatc aggaagccaa
601 attacatttt ggcagagagc tcctcttcca agtatggaat tattgtcagg aggaaggaga
661 gagacgggga actccaatga cagagagagc ctatag
//
last modified: Tue May 31 10:56 2022