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LOCUS	    JN562850		    1408 bp    RNA     linear	VRL 24-OCT-2011
DEFINITION  HIV-1 isolate 4012_C_2 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   JN562850
VERSION     JN562850.1 GI:353257409
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1408)
            Show all sequences for reference 1
  AUTHORS   Schnell,G., Joseph,S., Spudich,S., Price,R.W. and Swanstrom,R.
  TITLE     HIV-1 replication in the central nervous system occurs in two
	    distinct cell types.
  JOURNAL   PLoS. Pathog.. 7(10); e1002286 (2011)
  PUBMED    22007152
REFERENCE   2 (bases 1 to 1408)
            Show all sequences for reference 2
  AUTHORS   Schnell,G., Joseph,S., Spudich,S., Price,R.W. and Swanstrom,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2011) Microbiology and Immunology, University of
	    North Carolina at Chapel Hill, Chapel Hill, NC 27599-7295, USA
FEATURES             Location/Qualifiers
     source	     1..1408
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="4012_C_2"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="03-Sep-1997"
     gene	     <1..>1408
		     /gene="env"
     CDS	     <1..>1408
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AEQ76034.1"
		     /db_xref="GI:353257410"
		     /translation="CVTLNCTDLNKTHSTNNNNGTNGGKLMEKGEMKNCSFNITTNIR
		     DKRQKEYALFYKLDVVPIDDDNDNTSYRLISCNTSVITQACPKISFEPIPIHYCAPAG
		     FAIIKCNNKTFNGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIIRSDNFTDN
		     AKTIIVQLKEAVEINCIRPNNNTRKSIHITPGKAFYATGDIIGNIRQAHCNISEKNWN
		     NTLKQIVTKLREQFGNKTIVFNQSSGGDPEIVMHTFNCGGEFFYCDTTQLFNSTWNGT
		     EESNDTESNITITLPCRIKQIVNMWQEVGKAMYAPPIRGIISCSSNITGLLLVRDGGK
		     PNNETNNGTEVFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVG
		     LGAMFLGFLGAAGSTMGAASITLTVQARHLLSGIVQQQNNLLKAIEAQQHLLQLTVWG
		     IKQLQARVLAIERYLKDQQ"
BASE COUNT	544 a	 229 c	  297 g    338 t
ORIGIN
       1 tgtgttactt taaattgcac tgacttgaac aagactcata gtaccaataa taacaatggt 
      61 actaatggag ggaaactgat ggaaaaagga gaaatgaaaa attgctcttt taatatcacc 
     121 acaaacataa gagataagag acagaaggaa tatgcacttt tttataaact tgatgtagta 
     181 ccaatagatg atgataatga taatactagc tataggttga taagttgtaa cacctcagtc 
     241 attacacagg catgtccaaa gatatctttt gaaccaattc ccatacatta ttgtgccccg 
     301 gctggttttg cgattataaa gtgtaataat aagacattca atggaaaagg accatgtaca 
     361 aatgtcagca cagtacagtg tacacatgga attaggccag tagtatcaac tcaactactg 
     421 ttaaatggca gtctagcaga agaagaggta ataattagat ctgacaattt cacagacaat 
     481 gctaaaacca taatagtaca gctaaaagaa gctgtagaaa ttaattgtat aagacccaac 
     541 aacaatacaa gaaaaagtat acatataaca ccagggaaag cattttatgc aacaggagac 
     601 ataataggaa atataagaca agcacattgt aacattagtg aaaaaaattg gaataacact 
     661 ttaaaacaga tagttacaaa attaagagaa caatttggga ataagacaat agtctttaat 
     721 caatcctcag gaggagaccc agaaattgta atgcacactt ttaattgtgg aggggaattt 
     781 ttctactgtg atacaacaca attgtttaat agtacttgga atggtactga agagtcaaat 
     841 gacactgaaa gtaatatcac aatcacactc ccatgcagaa taaaacaaat tgtaaacatg 
     901 tggcaggaag taggaaaagc aatgtatgcc cctcccatca gaggaataat tagctgctca 
     961 tcaaatatta cggggctgct actagtaaga gatggtggta agcccaataa tgagactaat 
    1021 aatggtactg aggtcttcag acctggagga ggaaatatga aggacaactg gagaagtgaa 
    1081 ttatataaat ataaagtagt aaaaattgaa ccattaggag tagcacccac taaggcaaaa 
    1141 agaagagtgg tgcagagaga gaaaagagca gtgggattag gagctatgtt ccttgggttc 
    1201 ttgggagcag caggaagcac tatgggcgca gcgtcaataa cgctgacggt acaggccaga 
    1261 cacttattgt ctggtatagt gcaacagcaa aacaatttgc tgaaggctat tgaggcgcaa 
    1321 cagcatctgt tgcaactcac agtctggggc atcaagcagc tccaggcaag agtcctggct 
    1381 atagaaagat acctaaagga tcaacagc
//
last modified: Tue May 31 10:56 2022


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