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LOCUS JN560971 252 bp DNA linear SYN 21-AUG-2011
DEFINITION Simian-Human immunodeficiency virus clone CE43.296 envelope
glycoprotein (env) gene, partial cds
ACCESSION JN560971
VERSION JN560971.1 GI:343533543
KEYWORDS .
SOURCE Simian-Human immunodeficiency virus
ORGANISM Simian-Human immunodeficiency virus Viruses; Retro-transcribing
viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Primate
lentivirus group; unclassified Primate lentivirus group
REFERENCE 1 (bases 1 to 252)
Show all sequences for reference 1
AUTHORS Nishimura,Y., Shingai,M., Lee,W.R., Sadjadpour,R., Donau,O.K.,
Willey,R., Brenchley,J.M., Iyengar,R., Buckler-White,A.,
Igarashi,T. and Martin,M.A.
TITLE Recombination-mediated changes in coreceptor usage confer an
augmented pathogenic phenotype in a nonhuman primate model of
HIV-1-induced AIDS.
JOURNAL J. Virol.. 85(20); 10617-26 (2011)
PUBMED 21813599
REFERENCE 2 (bases 1 to 252)
Show all sequences for reference 2
AUTHORS Nishimura,Y., Shingai,M., Lee,W.R., Sadjadpour,R., Donau,O.K.,
Willey,R., Brenchley,J.M., Iyengar,R., Buckler-White,A.,
Igarashi,T. and Martin,M.A.
TITLE Direct Submission
JOURNAL Submitted (08-AUG-2011) Laboratory of Molecular Microbiology,
NIH-NIAID, 4 Center Drive, Bldg 4, Room 334, Bethesda, MD
20854-0460, USA
FEATURES Location/Qualifiers
source 1..252
/organism="Simian-Human immunodeficiency virus"
/mol_type="other DNA"
/db_xref="taxon:57667"
/clone="CE43.296"
gene <1..>252
/gene="env"
CDS <1..>252
/gene="env"
/note="V3 region; derived from V3 region of HIV-1 AD8
envelope glycoprotein"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AEM54801.1"
/db_xref="GI:343533544"
/translation="TDNAKNIIVQLKESVEINCTRPNNNTRKSIHIGPGRAFYATGDI
IGDIRQAHCNISRTKWNNALNQIATKLKEQFGNNKTIVFD"
BASE COUNT 123 a 34 c 41 g 54 t
ORIGIN
1 acagacaatg caaaaaacat aatagtacag ttgaaagaat ctgtagaaat taattgtaca
61 agacccaaca acaatacaag gaaaagtata catataggac caggaagagc attttatgca
121 acaggagaca taataggaga tataagacaa gcacattgca acattagtag aacaaaatgg
181 aataacgctt taaatcaaat agctacaaaa ttaaaagaac aatttgggaa taataaaaca
241 atagtctttg at
//
last modified: Tue May 31 10:56 2022