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LOCUS	    JN371775		     323 bp    DNA     linear	VRL 03-AUG-2011
DEFINITION  HIV-1 isolate B1E55MID10_c1060_10 nonfunctional env protein (env)
	    gene, partial sequence
ACCESSION   JN371775
VERSION     JN371775.1 GI:342155040
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 323)
            Show all sequences for reference 1
  AUTHORS   Eshleman,S., Hudelson,S., Redd,A., Wang,L., Debes,R., Chen,Y.,
	    Martens,C., Ricklefs,S., Selig,E., Porcella,S., Piwower-manning,E.,
	    McCauley,M., Hosseinipour,M., Kumwenda,J., Hakim,J.,
	    Chariyalertsak,S., Bruyn,G., Grinsztejn,B., Kumarasamy,N.,
	    Makhema,J., Mayer,K., Pilotto,J., Santos,B., Quinn,T., Cohen,M. and
	    Hughes,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2011) School of Medicine, Johns Hopkins
	    University, Wolfe Street, Baltimore, MD 21205, USA
REFERENCE   2
            Show all sequences for reference 2
  AUTHORS   Eshleman,S.H., Hudelson,S.E., Redd,A.D., Wang,L., Debes,R.,
	    Chen,Y.Q., Martens,C.A., Ricklefs,S.M., Selig,E.J., Porcella,S.F.,
	    Munshaw,S., Ray,S.C., Piwowar-Manning,E., McCauley,M.,
	    Hosseinipour,M.C., Kumwenda,J., Hakim,J.G., Chariyalertsak,S., de
	    Bruyn,G., Grinsztejn,B., Kumarasamy,N., Makhema,J., Mayer,K.H.,
	    Pilotto,J., Santos,B.R., Quinn,T.C., Cohen,M.S. and Hughes,J.P.
  TITLE     Analysis of Genetic Linkage of HIV From Couples Enrolled in the HIV
	    Prevention Trials Network 052 Trial.
  JOURNAL   J. Infect. Dis.. 204(12); 1918-26 (2011)
  PUBMED    21990420
COMMENT     Annotation information was provided by the author. Some of the
	    information does not have GenBank feature identifiers and is being
	    provided in the comment section. Information in this section is
	    searchable in HIV Database at Los Alamos (www.hiv.lanl.gov).;
	    ##HIVDataBaseData-START## Sequence Name B1E55MID10_c1060_10
	    Amplification Strategy pyrosequencing Patient Code Couple 052-2104
	    subject PA ##HIVDataBaseData-END##
FEATURES             Location/Qualifiers
     source	     1..323
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="B1E55MID10_c1060_10"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /note="collected between 2005 and 2011; sequence derived
		     from 10 multiple pyrosequencing reads subtype: C"
     gene	     <1..>323
		     /gene="env"
     misc_feature    <1..>323
		     /gene="env"
		     /note="nonfunctional env protein due to mutation"
BASE COUNT	116 a	  53 c	   80 g     74 t
ORIGIN
       1 attaagcagc tccaggcaag agtcctggct atagaaagat acctagggga tcaacagctc 
      61 ctagggatat ggggctgctc tggaaaactc atctgcacca ctaatgtgcc ttggaacggt 
     121 agttggagta ataaatctta cacagagatt tgggataaca tgacctggat gcagtgggat 
     181 aaagaaatta gtaattacac agacacaata tataggttgc ttgaaaaatc acaaaaccag 
     241 caggaaaaaa tgaagaagag ttactggcat tggacaagtg gaaaaatctg tagaattggt 
     301 ttgacataac aaactggctg tgg
//
last modified: Tue May 31 10:56 2022


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